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Spg034409 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034409
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold12:22460621..22462011
RNA-Seq ExpressionSpg034409
SyntenySpg034409
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.7e-2033.71Show/hide
Query:  ITNHGWDQGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSR
        + N  + +GV V WS  AIN++F L D P    +E +   +   L   +  V + GA+W +      T   + L      W  F+K  LLP TH  TVS+
Subjt:  ITNHGWDQGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSR

Query:  DRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG
        DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  AR P   +++ + +T  +  +   +  ++G
Subjt:  DRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.6e-2035.67Show/hide
Query:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF
        +GV V WS  AIN++F L D P    +E +   +   L   +  V   GA+W +      T   + L      W  F+K RLLP TH  TVS+DR+LL+ 
Subjt:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF

Query:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG
        ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  AR P   +++ + +T  +  +   + A++G
Subjt:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]3.9e-1935.67Show/hide
Query:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF
        +GV V  S  AIN+++ L D P    +E V A +  +L   +  V I GA+W +      T   + L      W  F+K RLLP TH  TVS++RVLL++
Subjt:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF

Query:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG
        ++L   SI+VG+II  EI     +K G LFFP+ IT +C  AR P   +++ + +T  +  +   + A++G
Subjt:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.5e-1837.13Show/hide
Query:  QGVAVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLL
        +GV V WS  AIN++F L D    H+ F E +  P   +L   +  V   GA+W +      T   + L      W  F+K RLLP TH   VS+DR+LL
Subjt:  QGVAVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLL

Query:  VFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPD---DKGIIDTPNLARL
        + ++L+  SI+VG++I +EI  C  +K G LFFP+ IT LC  A      +   + G ID   +AR+
Subjt:  VFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPD---DKGIIDTPNLARL

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]2.3e-1935.06Show/hide
Query:  DDDLPHFLRADITNHGWDQGVA----VDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFI
        DD+L     A +T     + +     V  +  +IN LFNL D     +  M+   + D L   +  V   G+QW + K    + +  YLK   N W  F+
Subjt:  DDDLPHFLRADITNHGWDQGVA----VDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFI

Query:  KQRLLPATHDSTVSRDRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKG
        +   +P +H  T+S +R+LL++AIL   SI+VGKII  EI+ C +KK G ++FP+ IT LC +A V T  + KG
Subjt:  KQRLLPATHDSTVSRDRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.3e-2033.71Show/hide
Query:  ITNHGWDQGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSR
        + N  + +GV V WS  AIN++F L D P    +E +   +   L   +  V + GA+W +      T   + L      W  F+K  LLP TH  TVS+
Subjt:  ITNHGWDQGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSR

Query:  DRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG
        DR+LL+ ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  AR P   +++ + +T  +  +   +  ++G
Subjt:  DRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG

A0A2P5BCG4 Uncharacterized protein (Fragment)7.7e-2135.67Show/hide
Query:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF
        +GV V WS  AIN++F L D P    +E +   +   L   +  V   GA+W +      T   + L      W  F+K RLLP TH  TVS+DR+LL+ 
Subjt:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF

Query:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG
        ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  AR P   +++ + +T  +  +   + A++G
Subjt:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG

A0A2P5CPE8 Uncharacterized protein1.9e-1935.67Show/hide
Query:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF
        +GV V  S  AIN+++ L D P    +E V A +  +L   +  V I GA+W +      T   + L      W  F+K RLLP TH  TVS++RVLL++
Subjt:  QGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLLVF

Query:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG
        ++L   SI+VG+II  EI     +K G LFFP+ IT +C  AR P   +++ + +T  +  +   + A++G
Subjt:  AILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQG

A0A2P5DXM3 Uncharacterized protein1.2e-1837.13Show/hide
Query:  QGVAVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLL
        +GV V WS  AIN++F L D    H+ F E +  P   +L   +  V   GA+W +      T   + L      W  F+K RLLP TH   VS+DR+LL
Subjt:  QGVAVDWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQRLLPATHDSTVSRDRVLL

Query:  VFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPD---DKGIIDTPNLARL
        + ++L+  SI+VG++I +EI  C  +K G LFFP+ IT LC  A      +   + G ID   +AR+
Subjt:  VFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPD---DKGIIDTPNLARL

A0A5D2MA47 Uncharacterized protein1.1e-1935.06Show/hide
Query:  DDDLPHFLRADITNHGWDQGVA----VDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFI
        DD+L     A +T     + +     V  +  +IN LFNL D     +  M+   + D L   +  V   G+QW + K    + +  YLK   N W  F+
Subjt:  DDDLPHFLRADITNHGWDQGVA----VDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFI

Query:  KQRLLPATHDSTVSRDRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKG
        +   +P +H  T+S +R+LL++AIL   SI+VGKII  EI+ C +KK G ++FP+ IT LC +A V T  + KG
Subjt:  KQRLLPATHDSTVSRDRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAATCAAGAGGCCGTAAGGAAAGAGACAATGAGGAAGAAGAGGTGCCAGTTACCCCTGATGCACCAAAGACAAAGGCGAAGAAAAGGAAAACGCCGGAAGAAAG
AAAGGCTAAGCGAAGAAGACGACAACAGAGGGTTGAAGTCGAAGAAGTCATAAGAAAAGTAGTAGAAGACGTTTCTGATGTTGTGGTTGAGGAGGAAAACCAAAAGGAAC
CTGAGGTAAAGGATCCTGAGCAAGTTGAGCCGATTATTGAGAATTCGCAGGAGGTTCAAGAGAAGCAAGCAGAGGATACACAAGAAGAAGGAAATGGACAGGAGGTTCAA
GAGCAGCAGGTTCAGATTGAAGAGATTGTACCAGAGATTCCACGTCGTCGCCGCCGGAAGCAGAATGCTGGGAGAATCAAGGTAATCCGAACAGACACCCCATCGCCGTC
GTCGACAGAATCTGAAAAAGAAAATTCTGAGAAAGAGGACCAGGTGAGAGAAGAAGCTGAAAAGAAGGTCGAGGAAGAAATTGTGGCGAAGCAAACCGAAGACAAGGGCA
AAGGGATTGTTGAAGCACTGGGAGAGACAGAGGAGGTCGATCATGAGGAACTAAGGTTGCCATATAATCGCTTTATCAACGATCTTGCCCGAGCAAAATATCTGGAAATG
CTAAAAAGGGACTTCTTATTTGAAAGAGGATTCGATGATGACTTGCCTCATTTCTTGCGTGCTGATATTACCAATCACGGATGGGATCAGGGTGTGGCTGTTGATTGGAG
CCCAGGAGCAATCAACTCTCTTTTCAACCTCCAAGATTTTCCACATGCTGGGTTTAATGAGATGGTGGTGGCACCGTCAAACGATCAACTGAATGCGGCTGTAAGGGAGG
TTGGTATTGAGGGGGCCCAATGGAGGTTGTTGAAGATAGAGAAGCGCACATTCCAAGCGGCTTATCTGAAGAGTGAGGATAATACATGGTTGGGCTTCATCAAGCAACGT
TTGCTTCCGGCAACCCACGACTCGACGGTGTCCCGAGACCGCGTGCTTCTGGTATTTGCTATTTTGCATTCTTTGAGTATTGATGTTGGAAAGATTATCTCGAATGAAAT
CTATACTTGCTGGCGAAAGAAGGTTGGTAAATTATTCTTCCCAAATACAATCACGATGTTGTGCAATAGGGCACGGGTGCCTACGACTCCAGATGACAAGGGGATCATTG
ACACACCTAATCTAGCGAGGCTTCAGCGGACTCAAAAAGCTCGCCAAGGTGGACTGGTTTGCGGCATCCATCAGATATTAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAATCAAGAGGCCGTAAGGAAAGAGACAATGAGGAAGAAGAGGTGCCAGTTACCCCTGATGCACCAAAGACAAAGGCGAAGAAAAGGAAAACGCCGGAAGAAAG
AAAGGCTAAGCGAAGAAGACGACAACAGAGGGTTGAAGTCGAAGAAGTCATAAGAAAAGTAGTAGAAGACGTTTCTGATGTTGTGGTTGAGGAGGAAAACCAAAAGGAAC
CTGAGGTAAAGGATCCTGAGCAAGTTGAGCCGATTATTGAGAATTCGCAGGAGGTTCAAGAGAAGCAAGCAGAGGATACACAAGAAGAAGGAAATGGACAGGAGGTTCAA
GAGCAGCAGGTTCAGATTGAAGAGATTGTACCAGAGATTCCACGTCGTCGCCGCCGGAAGCAGAATGCTGGGAGAATCAAGGTAATCCGAACAGACACCCCATCGCCGTC
GTCGACAGAATCTGAAAAAGAAAATTCTGAGAAAGAGGACCAGGTGAGAGAAGAAGCTGAAAAGAAGGTCGAGGAAGAAATTGTGGCGAAGCAAACCGAAGACAAGGGCA
AAGGGATTGTTGAAGCACTGGGAGAGACAGAGGAGGTCGATCATGAGGAACTAAGGTTGCCATATAATCGCTTTATCAACGATCTTGCCCGAGCAAAATATCTGGAAATG
CTAAAAAGGGACTTCTTATTTGAAAGAGGATTCGATGATGACTTGCCTCATTTCTTGCGTGCTGATATTACCAATCACGGATGGGATCAGGGTGTGGCTGTTGATTGGAG
CCCAGGAGCAATCAACTCTCTTTTCAACCTCCAAGATTTTCCACATGCTGGGTTTAATGAGATGGTGGTGGCACCGTCAAACGATCAACTGAATGCGGCTGTAAGGGAGG
TTGGTATTGAGGGGGCCCAATGGAGGTTGTTGAAGATAGAGAAGCGCACATTCCAAGCGGCTTATCTGAAGAGTGAGGATAATACATGGTTGGGCTTCATCAAGCAACGT
TTGCTTCCGGCAACCCACGACTCGACGGTGTCCCGAGACCGCGTGCTTCTGGTATTTGCTATTTTGCATTCTTTGAGTATTGATGTTGGAAAGATTATCTCGAATGAAAT
CTATACTTGCTGGCGAAAGAAGGTTGGTAAATTATTCTTCCCAAATACAATCACGATGTTGTGCAATAGGGCACGGGTGCCTACGACTCCAGATGACAAGGGGATCATTG
ACACACCTAATCTAGCGAGGCTTCAGCGGACTCAAAAAGCTCGCCAAGGTGGACTGGTTTGCGGCATCCATCAGATATTAGAGTGA
Protein sequenceShow/hide protein sequence
MAKSRGRKERDNEEEEVPVTPDAPKTKAKKRKTPEERKAKRRRRQQRVEVEEVIRKVVEDVSDVVVEEENQKEPEVKDPEQVEPIIENSQEVQEKQAEDTQEEGNGQEVQ
EQQVQIEEIVPEIPRRRRRKQNAGRIKVIRTDTPSPSSTESEKENSEKEDQVREEAEKKVEEEIVAKQTEDKGKGIVEALGETEEVDHEELRLPYNRFINDLARAKYLEM
LKRDFLFERGFDDDLPHFLRADITNHGWDQGVAVDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAAVREVGIEGAQWRLLKIEKRTFQAAYLKSEDNTWLGFIKQR
LLPATHDSTVSRDRVLLVFAILHSLSIDVGKIISNEIYTCWRKKVGKLFFPNTITMLCNRARVPTTPDDKGIIDTPNLARLQRTQKARQGGLVCGIHQILE