; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034410 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034410
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMADS-box protein AGL42
Genome locationscaffold12:23055012..23055478
RNA-Seq ExpressionSpg034410
SyntenySpg034410
Gene Ontology termsGO:0009838 - abscission (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010150 - leaf senescence (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0080187 - floral organ senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0003824 - catalytic activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3973568.1 hypothetical protein CMV_003023 [Castanea mollissima]6.3e-2389.39Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEFSLLS
        MVRGK++MKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEV+VIIFSQKGRLYEFSS+E+  LS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEFSLLS

KGN49884.2 hypothetical protein Csa_000572 [Cucumis sativus]1.8e-2296.72Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGKVEMKRIEN+TSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

XP_008467251.1 PREDICTED: MADS-box protein AGL42-like [Cucumis melo]1.8e-2296.72Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGKVEMKRIEN+TSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

XP_021804055.1 MADS-box protein AGL42-like [Prunus avium]1.8e-2293.55Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+VSVIIFSQKGRLYEFSSSE+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF

XP_038883063.1 MADS-box protein AGL42-like isoform X1 [Benincasa hispida]1.8e-2296.72Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEV+VIIFSQKGRLYEF+SSE
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

TrEMBL top hitse value%identityAlignment
A0A0A0KL39 Uncharacterized protein8.8e-2396.72Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGKVEMKRIEN+TSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

A0A1S4E646 MADS-box protein AGL42-like8.8e-2396.72Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGKVEMKRIEN+TSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

A0A6P5RSP7 MADS-box protein AGL42-like8.8e-2393.55Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+VSVIIFSQKGRLYEFSSSE+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF

A0A7N2MI83 MADS-box domain-containing protein1.5e-2291.94Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF
        MVRGK++M+RIENATSRQVTFSKRRNGLLKKAYELSVLCDAEV+VIIFSQKGRLYEFSS+EF
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF

M5XLE8 MADS-box domain-containing protein8.8e-2393.55Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF
        MVRGK+EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDA+VSVIIFSQKGRLYEFSSSE+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEF

SwissProt top hitse value%identityAlignment
O64645 MADS-box protein SOC12.5e-2288.33Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS
        MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEVS+IIFS KG+LYEF+SS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS

O82743 Agamous-like MADS-box protein AGL191.2e-2180.95Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEFS
        MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEV+++IFS + +LYEFSSS  +
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEFS

Q38838 Agamous-like MADS-box protein AGL142.5e-2288.33Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS
        MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEV++IIFS +G+LYEFSSS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS

Q9FIS1 MADS-box protein AGL427.7e-2488.52Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

Q9FLH5 MADS-box protein AGL727.9e-2178.69Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGK+E+K+IEN TSRQVTFSKRR+GL KKA+ELSVLCDA+V+ +IFSQKGRLYEF+SS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

Arabidopsis top hitse value%identityAlignment
AT2G45660.1 AGAMOUS-like 201.8e-2388.33Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS
        MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEVS+IIFS KG+LYEF+SS
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSS

AT5G62165.1 AGAMOUS-like 425.5e-2588.52Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

AT5G62165.2 AGAMOUS-like 425.5e-2588.52Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

AT5G62165.3 AGAMOUS-like 425.5e-2588.52Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE

AT5G62165.4 AGAMOUS-like 425.5e-2588.52Show/hide
Query:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE
        MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++S+IIFSQ+GRLYEFSSS+
Subjt:  MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGGGAAAAGTGGAAATGAAACGGATAGAAAATGCGACAAGTCGTCAAGTGACATTCTCAAAGAGGCGAAATGGGCTTCTGAAGAAGGCGTACGAGCTATCTGT
TCTTTGCGATGCTGAAGTTTCTGTAATCATTTTCTCTCAAAAAGGAAGGCTCTATGAGTTCTCAAGCTCCGAATTTTCCCTCCTTTCACCTCCTGGGAAACCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGGGGAAAAGTGGAAATGAAACGGATAGAAAATGCGACAAGTCGTCAAGTGACATTCTCAAAGAGGCGAAATGGGCTTCTGAAGAAGGCGTACGAGCTATCTGT
TCTTTGCGATGCTGAAGTTTCTGTAATCATTTTCTCTCAAAAAGGAAGGCTCTATGAGTTCTCAAGCTCCGAATTTTCCCTCCTTTCACCTCCTGGGAAACCGTAG
Protein sequenceShow/hide protein sequence
MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVSVIIFSQKGRLYEFSSSEFSLLSPPGKP