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Spg034417 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034417
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMADS-box protein AGL42-like
Genome locationscaffold12:23036294..23038387
RNA-Seq ExpressionSpg034417
SyntenySpg034417
Gene Ontology termsGO:0009838 - abscission (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010150 - leaf senescence (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0080187 - floral organ senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002487 - Transcription factor, K-box


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN49884.2 hypothetical protein Csa_000572 [Cucumis sativus]6.9e-2988.89Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRK+GKDGQ+N FRSEGYMQQLKQEA+MTAKKIE+LE SQQKLLGRGL SCSFEEIREIERQLVLSLTRIRE K
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

XP_004143644.1 MADS-box protein AGL42 isoform X1 [Cucumis sativus]6.9e-2988.89Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRK+GKDGQ+N FRSEGYMQQLKQEA+MTAKKIE+LE SQQKLLGRGL SCSFEEIREIERQLVLSLTRIRE K
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

XP_008467251.1 PREDICTED: MADS-box protein AGL42-like [Cucumis melo]3.4e-2886.42Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRK+GK+GQ+N FRSEGYMQQLKQEA+MTAKKIE+LE SQQKLLGRGL SCSFEE+REIERQLVLSLTRIRE K
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

XP_011654887.1 MADS-box protein AGL42 isoform X2 [Cucumis sativus]6.9e-2988.89Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRK+GKDGQ+N FRSEGYMQQLKQEA+MTAKKIE+LE SQQKLLGRGL SCSFEEIREIERQLVLSLTRIRE K
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

XP_022131257.1 MADS-box protein AGL42-like isoform X1 [Momordica charantia]7.6e-2885.37Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT
        MQKSIERY KYGKDGQ NAFRSEGYMQQLKQEA+MTAKKIE LE+SQQKLLGRGL SCS +E+REIERQL LSL+RIRERK+
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT

TrEMBL top hitse value%identityAlignment
A0A0A0KL39 Uncharacterized protein3.3e-2988.89Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRK+GKDGQ+N FRSEGYMQQLKQEA+MTAKKIE+LE SQQKLLGRGL SCSFEEIREIERQLVLSLTRIRE K
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

A0A1S4E646 MADS-box protein AGL42-like1.7e-2886.42Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRK+GK+GQ+N FRSEGYMQQLKQEA+MTAKKIE+LE SQQKLLGRGL SCSFEE+REIERQLVLSLTRIRE K
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

A0A6J1BPQ9 MADS-box protein AGL42-like isoform X24.8e-2886.42Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQKSIERY KYGKDGQ NAFRSEGYMQQLKQEA+MTAKKIE LE+SQQKLLGRGL SCS +E+REIERQL LSL+RIRERK
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

A0A6J1BSU4 MADS-box protein AGL42-like isoform X13.7e-2885.37Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT
        MQKSIERY KYGKDGQ NAFRSEGYMQQLKQEA+MTAKKIE LE+SQQKLLGRGL SCS +E+REIERQL LSL+RIRERK+
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT

A0A6J1I2F0 MADS-box protein AGL42-like8.2e-2880.72Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKTL
        MQK+IERYRK+GK G+ N F+SEGYMQQ+KQEA+MTAKKIEELE SQ+KLLGRGL SCSFEE+REIE+QL+LSLTRIRERK L
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKTL

SwissProt top hitse value%identityAlignment
O64645 MADS-box protein SOC13.6e-1251.22Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT
        MQ +I+RY ++ KD  +    SE  MQ LK EA    KKIE+LE+S++KLLG G+G+CS EE+++IE+QL  S+  IR RKT
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT

O82743 Agamous-like MADS-box protein AGL197.0e-0844.87Show/hide
Query:  SIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        +IERY++  K+   N  R++   QQ + E     KKIE+LE S++KLLG G+ +CS EE++++E QL  SL+RIR +K
Subjt:  SIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

Q9FIS1 MADS-box protein AGL425.9e-1555.56Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRKY KD + +   S+ ++QQLKQEA     KIE LE  ++KLLG+G+ SCS EE++EI+ QL  SL ++RERK
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

Q9LT93 MADS-box protein AGL711.1e-0844.83Show/hide
Query:  MQKSIERYRKYGKDGQANAF------RSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        M+K I+RY K+     +NAF      + E Y+Q+LK E D   KKI+ LE   +KLLG+GL SCS  E++EI+ Q+  SL  +R RK
Subjt:  MQKSIERYRKYGKDGQANAF------RSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

Q9XJ60 MADS-box transcription factor 501.1e-0846.91Show/hide
Query:  QKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT
        QK+IERYR Y K+   N    +  ++Q+K +AD  AKK+E LE+ ++KLLG  L  CS EE+  +E +L  SL  IR RKT
Subjt:  QKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT

Arabidopsis top hitse value%identityAlignment
AT2G45660.1 AGAMOUS-like 202.5e-1351.22Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT
        MQ +I+RY ++ KD  +    SE  MQ LK EA    KKIE+LE+S++KLLG G+G+CS EE+++IE+QL  S+  IR RKT
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKT

AT5G62165.1 AGAMOUS-like 424.2e-1655.56Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRKY KD + +   S+ ++QQLKQEA     KIE LE  ++KLLG+G+ SCS EE++EI+ QL  SL ++RERK
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

AT5G62165.2 AGAMOUS-like 424.2e-1655.56Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRKY KD + +   S+ ++QQLKQEA     KIE LE  ++KLLG+G+ SCS EE++EI+ QL  SL ++RERK
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

AT5G62165.3 AGAMOUS-like 424.2e-1655.56Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRKY KD + +   S+ ++QQLKQEA     KIE LE  ++KLLG+G+ SCS EE++EI+ QL  SL ++RERK
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK

AT5G62165.4 AGAMOUS-like 424.2e-1655.56Show/hide
Query:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK
        MQK+IERYRKY KD + +   S+ ++QQLKQEA     KIE LE  ++KLLG+G+ SCS EE++EI+ QL  SL ++RERK
Subjt:  MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAAGTCAATTGAACGCTACCGAAAGTATGGGAAAGATGGACAAGCCAATGCTTTTCGCTCCGAAGGATACATGCAGCAACTGAAGCAAGAAGCTGACATGACAGC
AAAGAAAATCGAGGAACTTGAAAGTTCACAACAGAAGCTATTGGGACGTGGCTTGGGTTCTTGTTCCTTTGAGGAAATCCGAGAGATTGAAAGACAGTTGGTACTGAGCT
TAACCCGTATTAGAGAAAGAAAGACACTTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAAGTCAATTGAACGCTACCGAAAGTATGGGAAAGATGGACAAGCCAATGCTTTTCGCTCCGAAGGATACATGCAGCAACTGAAGCAAGAAGCTGACATGACAGC
AAAGAAAATCGAGGAACTTGAAAGTTCACAACAGAAGCTATTGGGACGTGGCTTGGGTTCTTGTTCCTTTGAGGAAATCCGAGAGATTGAAAGACAGTTGGTACTGAGCT
TAACCCGTATTAGAGAAAGAAAGACACTTGAATAG
Protein sequenceShow/hide protein sequence
MQKSIERYRKYGKDGQANAFRSEGYMQQLKQEADMTAKKIEELESSQQKLLGRGLGSCSFEEIREIERQLVLSLTRIRERKTLE