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Spg034436 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034436
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:14392265..14394168
RNA-Seq ExpressionSpg034436
SyntenySpg034436
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]3.1e-0437.08Show/hide
Query:  SYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS
        S + + K    F   ++ + +P  F   W +  E  A       +      +   PRG R  LQ  +L KTVEIELP+PDTLPTS+ESS
Subjt:  SYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]1.1e-0445.16Show/hide
Query:  LFGLSYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS
        LFGLSY E TK                      GV V S+AL  +      + + +   PRG R  LQ REL KT  IELPVPDTLPTSAESS
Subjt:  LFGLSYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]1.5e-0651.72Show/hide
Query:  RAKQEDLWFPLVFRT--FWG-------VQVESEALFGISGR-IGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS
        R+ +E+L   L  RT  F G        QVESEALFG+  + I +   F    PRG R   Q  +L KTVEIELPVPDTLPTSAESS
Subjt:  RAKQEDLWFPLVFRT--FWG-------VQVESEALFGISGR-IGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS

TrEMBL top hitse value%identityAlignment
A0A5A7V2F2 Uncharacterized protein1.5e-0437.08Show/hide
Query:  SYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS
        S + + K    F   ++ + +P  F   W +  E  A       +      +   PRG R  LQ  +L KTVEIELP+PDTLPTS+ESS
Subjt:  SYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS

A0A5D3BET3 Uncharacterized protein7.2e-0751.72Show/hide
Query:  RAKQEDLWFPLVFRT--FWG-------VQVESEALFGISGR-IGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS
        R+ +E+L   L  RT  F G        QVESEALFG+  + I +   F    PRG R   Q  +L KTVEIELPVPDTLPTSAESS
Subjt:  RAKQEDLWFPLVFRT--FWG-------VQVESEALFGISGR-IGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS

A0A5D3DWP3 Uncharacterized protein5.2e-0545.16Show/hide
Query:  LFGLSYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS
        LFGLSY E TK                      GV V S+AL  +      + + +   PRG R  LQ REL KT  IELPVPDTLPTSAESS
Subjt:  LFGLSYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAAGAACTAAGAGAGCACAAGATTTTCGAGCAAAGCAAGAGGATCTCTGGTTTCCTCTAGTTTTTCGAAC
ATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGCATTTCTGGACGAATCGGTTGGGAATATCGTTTTCATTTCTTCAGGCCAAGAGGATATAGGTCGGGTCTAC
AAGCCAGGGAACTAGCTAAGACTGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAAGAACTAAGAGAGCACAAGATTTTCGAGCAAAGCAAGAGGATCTCTGGTTTCCTCTAGTTTTTCGAAC
ATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGCATTTCTGGACGAATCGGTTGGGAATATCGTTTTCATTTCTTCAGGCCAAGAGGATATAGGTCGGGTCTAC
AAGCCAGGGAACTAGCTAAGACTGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCTGA
Protein sequenceShow/hide protein sequence
MPTSGFLFGLSYTERTKRAQDFRAKQEDLWFPLVFRTFWGVQVESEALFGISGRIGWEYRFHFFRPRGYRSGLQARELAKTVEIELPVPDTLPTSAESS