; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034465 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034465
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:16281985..16286553
RNA-Seq ExpressionSpg034465
SyntenySpg034465
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]1.6e-1536.84Show/hide
Query:  RLSRSMSCLIGPFCCILCRMAEENLDHIL--WSCDYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNS
        +++++ SC++G         + E L+++   W C+            +   P +YLGLPLGG P+  +FW PVLDK++K+L RW+R  LS+G  LTL  +
Subjt:  RLSRSMSCLIGPFCCILCRMAEENLDHIL--WSCDYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNS

Query:  VLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE
        VLS +P YY+ +F MP  V+ ++ QL+  F  E
Subjt:  VLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE

KAA0044242.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa]3.9e-1752.94Show/hide
Query:  KVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLL
        K+  K+E LPFLYLGL LGGYP++  FW+P++D++ KKLDRW+ F +SRG   TL NS+L+  P YYL IF +P  V+  L++L+
Subjt:  KVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLL

KAA0051398.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.9e-1655.79Show/hide
Query:  KIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE--SGGRTN
        KIE LP LY GLPLGGYPK   FWQPVLDK QKKL  W+R  LSRG  LTL +SVLS  P Y++  FLMP  VS      +  F +E  +G + N
Subjt:  KIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE--SGGRTN

VVA31869.1 Hypothetical predicted protein, partial [Prunus dulcis]1.6e-1536.84Show/hide
Query:  RLSRSMSCLIGPFCCILCRMAEENLDHIL--WSCDYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNS
        +++++ SC++G         + E L+++   W C+            +   P +YLGLPLGG P+  +FW PVLDK++K+L RW+R  LS+G  LTL  +
Subjt:  RLSRSMSCLIGPFCCILCRMAEENLDHIL--WSCDYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNS

Query:  VLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE
        VLS +P YY+ +F MP  V+ ++ QL+  F  E
Subjt:  VLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE

XP_038880332.1 uncharacterized protein LOC120071973 [Benincasa hispida]3.2e-1956.84Show/hide
Query:  KIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE--SGGRTN
        K++ LP +YLGLPLGGYPK  SFWQPV+DK+Q KLD+WRRF LSRG   TL  SV S LP YYL +FL+P  V   + + +  FF E   GG+ N
Subjt:  KIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE--SGGRTN

TrEMBL top hitse value%identityAlignment
A0A5A7TLN3 Transposon Tf2-9 polyprotein1.9e-1752.94Show/hide
Query:  KVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLL
        K+  K+E LPFLYLGL LGGYP++  FW+P++D++ KKLDRW+ F +SRG   TL NS+L+  P YYL IF +P  V+  L++L+
Subjt:  KVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLL

A0A5A7U808 Integrase, catalytic core9.4e-1755.79Show/hide
Query:  KIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE--SGGRTN
        KIE LP LY GLPLGGYPK   FWQPVLDK QKKL  W+R  LSRG  LTL +SVLS  P Y++  FLMP  VS      +  F +E  +G + N
Subjt:  KIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQE--SGGRTN

A0A803P8A0 Uncharacterized protein8.5e-1840.6Show/hide
Query:  LIGPFCCILCRMAEENLDHILWSC---DYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPL
        ++  FC I       N   +L  C   +    G   +  ++   P  YLG+PLGG P+K +FW+PVLDK  K++D W+   LSRG  LTL  SVLS LP+
Subjt:  LIGPFCCILCRMAEENLDHILWSC---DYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPL

Query:  YYLYIFLMPSMVSLELRQLLHAFFQESGGRTNG
        YYL +F +P MV  EL +++  FF E G    G
Subjt:  YYLYIFLMPSMVSLELRQLLHAFFQESGGRTNG

A0A803PZS1 Uncharacterized protein2.1e-1637.68Show/hide
Query:  RSMSCLIGPFCCILCRMAEENLDHILWSC---DYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVL
        R +  ++  FC +       N   +L  C   +        +  K+ + P  YLG+PLGG P+K  FW+PVLDK  K+LD W+   LSRG  LTL  SVL
Subjt:  RSMSCLIGPFCCILCRMAEENLDHILWSC---DYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVL

Query:  SCLPLYYLYIFLMPSMVSLELRQLLHAFFQESGGRTNG
        S LP+YYL +F  P +V   + +++  FF E G    G
Subjt:  SCLPLYYLYIFLMPSMVSLELRQLLHAFFQESGGRTNG

A0A803QQM3 Uncharacterized protein1.2e-1639.1Show/hide
Query:  LIGPFCCILCRMAEENLDHILWSC---DYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPL
        ++  FC I       N   +L  C   D       ++  ++   P  YLG+PLGG P+K SFW+PVLDK   ++D W+   LSRG  LTL  SVLS LP+
Subjt:  LIGPFCCILCRMAEENLDHILWSC---DYARYGRFKVASKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPL

Query:  YYLYIFLMPSMVSLELRQLLHAFFQESGGRTNG
        Y+L +F  P +V  EL +++  FF E G    G
Subjt:  YYLYIFLMPSMVSLELRQLLHAFFQESGGRTNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGTCGTTGGGGCACAACCCGAGATCAGCTACATTCTGGGACCCAATGGTGAAGAATCCAACACCCTGTGGCATAGGATTATCATTAGCAAACACAGCCCTCATCC
TTCTGAATGGGTGACGGGGGGATCAAAGGCACTTCTAGAAACTCTTGGAAAGAAATTTCCCGAAATCCATGGAAGAGTTAATACTCTTGATAGGCTCTCCAGAAGTATGT
CTTGTTTGATTGGACCTTTTTGTTGCATTCTCTGTCGGATGGCGGAAGAAAACCTCGACCATATTTTGTGGAGCTGCGATTATGCTAGATATGGAAGATTCAAAGTTGCT
TCAAAGATTGAATCATTGCCTTTCCTTTATCTTGGCCTTCCCCTGGGTGGATATCCCAAAAAGTTTTCTTTTTGGCAGCCTGTTCTTGACAAGATTCAGAAAAAGTTGGA
CAGATGGAGAAGATTTACTCTCTCTAGAGGGAGGTGTTTGACTCTTTACAATTCAGTCCTTTCATGCTTACCTTTATACTACTTGTATATTTTTCTTATGCCTTCAATGG
TTAGTTTGGAGCTCAGGCAACTTTTGCATGCTTTTTTCCAGGAAAGTGGTGGAAGGACTAATGGCAGAGGCACAAGTTTTGCTGAATTGGCGGCGATAAGGGGATTTGCA
GAAGCTAGAAGAAAGCGGCTTCCGAGAGCGGATGGAAAGGCGAAAAGTATGGTGTTTGAGAAAGGAGGCAAGCAAGGGAAGAGCAAGAATGGCCATTGTTATGGCTCAAG
CTTTTTGATTTTGGTGTCCTCAGAGAGAAGGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATGTCGTTGGGGCACAACCCGAGATCAGCTACATTCTGGGACCCAATGGTGAAGAATCCAACACCCTGTGGCATAGGATTATCATTAGCAAACACAGCCCTCATCC
TTCTGAATGGGTGACGGGGGGATCAAAGGCACTTCTAGAAACTCTTGGAAAGAAATTTCCCGAAATCCATGGAAGAGTTAATACTCTTGATAGGCTCTCCAGAAGTATGT
CTTGTTTGATTGGACCTTTTTGTTGCATTCTCTGTCGGATGGCGGAAGAAAACCTCGACCATATTTTGTGGAGCTGCGATTATGCTAGATATGGAAGATTCAAAGTTGCT
TCAAAGATTGAATCATTGCCTTTCCTTTATCTTGGCCTTCCCCTGGGTGGATATCCCAAAAAGTTTTCTTTTTGGCAGCCTGTTCTTGACAAGATTCAGAAAAAGTTGGA
CAGATGGAGAAGATTTACTCTCTCTAGAGGGAGGTGTTTGACTCTTTACAATTCAGTCCTTTCATGCTTACCTTTATACTACTTGTATATTTTTCTTATGCCTTCAATGG
TTAGTTTGGAGCTCAGGCAACTTTTGCATGCTTTTTTCCAGGAAAGTGGTGGAAGGACTAATGGCAGAGGCACAAGTTTTGCTGAATTGGCGGCGATAAGGGGATTTGCA
GAAGCTAGAAGAAAGCGGCTTCCGAGAGCGGATGGAAAGGCGAAAAGTATGGTGTTTGAGAAAGGAGGCAAGCAAGGGAAGAGCAAGAATGGCCATTGTTATGGCTCAAG
CTTTTTGATTTTGGTGTCCTCAGAGAGAAGGCCTTAG
Protein sequenceShow/hide protein sequence
MYVVGAQPEISYILGPNGEESNTLWHRIIISKHSPHPSEWVTGGSKALLETLGKKFPEIHGRVNTLDRLSRSMSCLIGPFCCILCRMAEENLDHILWSCDYARYGRFKVA
SKIESLPFLYLGLPLGGYPKKFSFWQPVLDKIQKKLDRWRRFTLSRGRCLTLYNSVLSCLPLYYLYIFLMPSMVSLELRQLLHAFFQESGGRTNGRGTSFAELAAIRGFA
EARRKRLPRADGKAKSMVFEKGGKQGKSKNGHCYGSSFLILVSSERRP