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Spg034484 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034484
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFiber protein fb11
Genome locationscaffold4:13909057..13916012
RNA-Seq ExpressionSpg034484
SyntenySpg034484
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR58059.1 hypothetical protein CICLE_v10023834mg, partial [Citrus clementina]3.7e-0768.63Show/hide
Query:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPAVVRPMLDS+E+SKQVPQPALSDVVA +TGKK
Subjt:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

XP_006444819.2 uncharacterized protein LOC18047536 [Citrus clementina]3.7e-0768.63Show/hide
Query:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPAVVRPMLDS+E+SKQVPQPALSDVVA +TGKK
Subjt:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

XP_011468926.1 PREDICTED: uncharacterized protein LOC101307919 isoform X2 [Fragaria vesca subsp. vesca]2.2e-0791.67Show/hide
Query:  LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        L LPAVVRPMLDS+EASKQVPQPALSDVVA MTGKK
Subjt:  LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

XP_022150787.1 uncharacterized protein LOC111018851 [Momordica charantia]2.9e-0770.59Show/hide
Query:  EEEVLEMADLVG--CLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPA VRP+LDSYEASKQVPQPALSDVVA MTGKK
Subjt:  EEEVLEMADLVG--CLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

XP_024176237.1 ethylene-responsive transcription factor CRF6 isoform X1 [Rosa chinensis]9.8e-0885.37Show/hide
Query:  DLVGCLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        D V  L LPAVVRPMLDS+EASKQVPQPALSDVVA MTGKK
Subjt:  DLVGCLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

TrEMBL top hitse value%identityAlignment
A0A067HF49 Uncharacterized protein1.8e-0768.63Show/hide
Query:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPAVVRPMLDS+E+SKQVPQPALSDVVA +TGKK
Subjt:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

A0A161X0N4 Uncharacterized protein2.4e-0788.89Show/hide
Query:  LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        L LPAVVRP+LDSYE+SKQVPQPALSDVVA MTGKK
Subjt:  LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

A0A2P6SIL3 Putative transcription factor AP2-EREBP family4.7e-0885.37Show/hide
Query:  DLVGCLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        D V  L LPAVVRPMLDS+EASKQVPQPALSDVVA MTGKK
Subjt:  DLVGCLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

A0A6J1DBQ1 uncharacterized protein LOC1110188511.4e-0770.59Show/hide
Query:  EEEVLEMADLVG--CLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPA VRP+LDSYEASKQVPQPALSDVVA MTGKK
Subjt:  EEEVLEMADLVG--CLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

V4VXE0 Uncharacterized protein (Fragment)1.8e-0768.63Show/hide
Query:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPAVVRPMLDS+E+SKQVPQPALSDVVA +TGKK
Subjt:  EEEVLEMADLVGC--LLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46540.1 unknown protein8.0e-0858.82Show/hide
Query:  EEEVLEMADLVG--CLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK
        +E V+  + L+G   L LPAVVRP+LDS EASKQV  P L+DV+A +TGKK
Subjt:  EEEVLEMADLVG--CLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTGGATCCTTTTACTCATTTGCTTGACTTCGAAAATCGAATCACGAACGTTCAAGCAGCGAATTAGACAGAACTTACGGGAAGATACATTCAGAAGAAGCGAAGATGC
CGGTCATGGAGAAGCTGAAGATGTTCGTTGTTCAAGAGCCTGTGGTGGCTGCATCTTGTTTAATCGGTGGAATTGTTTGCACCTCCTAGCTAGTTTTTTAGAAAGCTTGA
AATGCAATAATTCTTTAGGACTTAAGCCAGAGGCACAAAAAAGCTTCTTCGAGAAAGCTTTAGGATTGACTATTAATTTGGATAAATCATCCATAGTTGGTCTGAACACC
CCTGAGGAAGAGGTCCTTGAGATGGCTGATCTAGTGGGCTGTCTCCTCCTCCCAGCCGTTGTAAGGCCAATGCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCC
TGCATTAAGTGATGTGGTTGCAAATATGACTGGAAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
TTGTGGATCCTTTTACTCATTTGCTTGACTTCGAAAATCGAATCACGAACGTTCAAGCAGCGAATTAGACAGAACTTACGGGAAGATACATTCAGAAGAAGCGAAGATGC
CGGTCATGGAGAAGCTGAAGATGTTCGTTGTTCAAGAGCCTGTGGTGGCTGCATCTTGTTTAATCGGTGGAATTGTTTGCACCTCCTAGCTAGTTTTTTAGAAAGCTTGA
AATGCAATAATTCTTTAGGACTTAAGCCAGAGGCACAAAAAAGCTTCTTCGAGAAAGCTTTAGGATTGACTATTAATTTGGATAAATCATCCATAGTTGGTCTGAACACC
CCTGAGGAAGAGGTCCTTGAGATGGCTGATCTAGTGGGCTGTCTCCTCCTCCCAGCCGTTGTAAGGCCAATGCTGGATTCCTATGAAGCATCTAAGCAAGTTCCTCAGCC
TGCATTAAGTGATGTGGTTGCAAATATGACTGGAAAGAAATAA
Protein sequenceShow/hide protein sequence
LWILLLICLTSKIESRTFKQRIRQNLREDTFRRSEDAGHGEAEDVRCSRACGGCILFNRWNCLHLLASFLESLKCNNSLGLKPEAQKSFFEKALGLTINLDKSSIVGLNT
PEEEVLEMADLVGCLLLPAVVRPMLDSYEASKQVPQPALSDVVANMTGKK