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Spg034501 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034501
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlycine--tRNA ligase
Genome locationscaffold4:16286034..16286583
RNA-Seq ExpressionSpg034501
SyntenySpg034501
Gene Ontology termsGO:0006426 - glycyl-tRNA aminoacylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0004820 - glycine-tRNA ligase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140508.3 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Cucumis sativus]4.0e-2682.93Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +SFLKHHT+ LSI SRKPLS +FCKSPYRRQF+KTCASAI+PSTTLHHSS  SK+ GSK+SVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

XP_008459797.1 PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Cucumis melo]2.1e-2786.59Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +SFLKHHT+ LSIRSRKPLSS+FCKSPYRRQF+KT ASAI+PSTTLHHSS DSK+ GSKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

XP_022156971.1 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Momordica charantia]3.7e-2479.27Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +S L+ HT+RLSIR+ KPLSS+ C SPYRRQF+KTC SAI+PSTTL HSS DSKSD SKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

XP_022156973.1 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Momordica charantia]3.7e-2479.27Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +S L+ HT+RLSIR+ KPLSS+ C SPYRRQF+KTC SAI+PSTTL HSS DSKSD SKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

XP_038874261.1 glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1 [Benincasa hispida]1.9e-2890.24Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPLLASFLKHHT+ LSIRSRK LSSSFCKSPYRRQF+KTCASAISPSTTL HSS+DSK+ GSKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KFM2 Glycine--tRNA ligase1.9e-2682.93Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +SFLKHHT+ LSI SRKPLS +FCKSPYRRQF+KTCASAI+PSTTLHHSS  SK+ GSK+SVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

A0A1S3CB07 Glycine--tRNA ligase1.0e-2786.59Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +SFLKHHT+ LSIRSRKPLSS+FCKSPYRRQF+KT ASAI+PSTTLHHSS DSK+ GSKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

A0A6J1DS69 Glycine--tRNA ligase1.8e-2479.27Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +S L+ HT+RLSIR+ KPLSS+ C SPYRRQF+KTC SAI+PSTTL HSS DSKSD SKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

A0A6J1DWK5 Glycine--tRNA ligase1.8e-2479.27Show/hide
Query:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL +S L+ HT+RLSIR+ KPLSS+ C SPYRRQF+KTC SAI+PSTTL HSS DSKSD SKSSVLTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

A0A6J1EYL5 Glycine--tRNA ligase1.7e-2280.72Show/hide
Query:  MAILALPLLASFLKHHT-FRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ
        MAILALPL ASFLKHHT +RLSIRSRKPLSSSF KSPYRR F+KT ASAISPSTT  HSS DS+S  SK ++LTFQQAIQRLQ
Subjt:  MAILALPLLASFLKHHT-FRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCTTGCTCTTCCCTTGCTTGCCTCCTTTCTCAAACACCATACTTTTCGCCTTTCCATCCGCTCTCGGAAGCCGCTTTCTTCTAGCTTCTGCAAATCCCCTTA
TCGCCGCCAATTCAGCAAAACTTGTGCCTCTGCCATTAGTCCTTCCACCACTCTGCACCATTCATCCGCTGATTCCAAGAGTGATGGCTCCAAGTCCTCGGTTCTTACTT
TTCAACAAGCAATTCAGCGTCTCCAGTGTCTTTTCGTTGGATTGTCTCAATGTTGGGTATTGGAAATTCGGCTTTATAGTCCGGTTGTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTCTTGCTCTTCCCTTGCTTGCCTCCTTTCTCAAACACCATACTTTTCGCCTTTCCATCCGCTCTCGGAAGCCGCTTTCTTCTAGCTTCTGCAAATCCCCTTA
TCGCCGCCAATTCAGCAAAACTTGTGCCTCTGCCATTAGTCCTTCCACCACTCTGCACCATTCATCCGCTGATTCCAAGAGTGATGGCTCCAAGTCCTCGGTTCTTACTT
TTCAACAAGCAATTCAGCGTCTCCAGTGTCTTTTCGTTGGATTGTCTCAATGTTGGGTATTGGAAATTCGGCTTTATAGTCCGGTTGTTTCTTAG
Protein sequenceShow/hide protein sequence
MAILALPLLASFLKHHTFRLSIRSRKPLSSSFCKSPYRRQFSKTCASAISPSTTLHHSSADSKSDGSKSSVLTFQQAIQRLQCLFVGLSQCWVLEIRLYSPVVS