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Spg034507 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034507
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationscaffold4:11267792..11272253
RNA-Seq ExpressionSpg034507
SyntenySpg034507
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039149.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]1.2e-0435.04Show/hide
Query:  SVESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKDPKPDPHATVVVAASTPSSWISRDQQLEALSFVFSSLSNAVFAQIVGV
        ++E+C W +RA C   GD S  WV+ + D +H+ SVDV LTDH+QATF+ IKD   +  +      STP + +        LS  +     A    +  +
Subjt:  SVESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKDPKPDPHATVVVAASTPSSWISRDQQLEALSFVFSSLSNAVFAQIVGV

Query:  LTSFSDSDEFKHLPSLA
          S  DS  +K LP  A
Subjt:  LTSFSDSDEFKHLPSLA

XP_008452162.1 PREDICTED: uncharacterized protein LOC103493267 [Cucumis melo]6.1e-0928.82Show/hide
Query:  IVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVR------QGRFHHSIGLTKLPVDFKIDVNDIVS-----------------
        +  D DV W+Y+I++  +    +LIV     L+I       +GS S+ S +      +GRF  ++ ++K+  +F + V D+ S                 
Subjt:  IVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVR------QGRFHHSIGLTKLPVDFKIDVNDIVS-----------------

Query:  ------------------VESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD
                          +E+C W + A C   GD S  WV+ + D + +CSVD  LTDH+QATF+ IKD
Subjt:  ------------------VESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]1.1e-2637.5Show/hide
Query:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVRQ--GRFHHSIGLTKLPVDFKIDVND-------------
        G+  F+  DMKI +DKDVHWLYNI+S G ++ CSL+VDCRN L+  +D +P+  S S D+  Q  G+F+  I +  +   F I VND             
Subjt:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVRQ--GRFHHSIGLTKLPVDFKIDVND-------------

Query:  ----------------------IVSVESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD
                                   +C WF+ A +FG  GS+ W+VKK   +H+CS++++L DH+QATFS IK+
Subjt:  ----------------------IVSVESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD

XP_022155207.1 uncharacterized protein LOC111022347 [Momordica charantia]5.0e-2738.64Show/hide
Query:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVND-------------
        G++ FM  DMKI +DKDVHWLYN++  G+ + CSL+VDCRN L+  +D +P+  S S D+     G+FH+SI +T +  +F I+VND             
Subjt:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVND-------------

Query:  --------------------IVS--VESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD
                            IV   +++C W++ A +FG  GS+ W+VKK   +H+CS++++L DH+QATFS IK+
Subjt:  --------------------IVS--VESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD

XP_022159005.1 uncharacterized protein LOC111025451 [Momordica charantia]8.8e-1638.62Show/hide
Query:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVNDIVSVESCG--WFV
        G++ F+  DMKI++DKDV+WL+N+   G ++ CSL+VDCRN L+  +D +P+  S S D+     G+FHHSI +  +  +F I+VND    + CG     
Subjt:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVNDIVSVESCG--WFV

Query:  RACRFGGDGSDAWVVKKIDGDHSCSV--DVILTDHQQATFSFIKD
         A R      D +  + I  +   ++    IL DH+QATFS IK+
Subjt:  RACRFGGDGSDAWVVKKIDGDHSCSV--DVILTDHQQATFSFIKD

TrEMBL top hitse value%identityAlignment
A0A1S3BT85 uncharacterized protein LOC1034932673.0e-0928.82Show/hide
Query:  IVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVR------QGRFHHSIGLTKLPVDFKIDVNDIVS-----------------
        +  D DV W+Y+I++  +    +LIV     L+I       +GS S+ S +      +GRF  ++ ++K+  +F + V D+ S                 
Subjt:  IVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVR------QGRFHHSIGLTKLPVDFKIDVNDIVS-----------------

Query:  ------------------VESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD
                          +E+C W + A C   GD S  WV+ + D + +CSVD  LTDH+QATF+ IKD
Subjt:  ------------------VESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD

A0A5A7TCZ3 Protein FAR-RED ELONGATED HYPOCOTYL 3-like5.8e-0535.04Show/hide
Query:  SVESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKDPKPDPHATVVVAASTPSSWISRDQQLEALSFVFSSLSNAVFAQIVGV
        ++E+C W +RA C   GD S  WV+ + D +H+ SVDV LTDH+QATF+ IKD   +  +      STP + +        LS  +     A    +  +
Subjt:  SVESCGWFVRA-CRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKDPKPDPHATVVVAASTPSSWISRDQQLEALSFVFSSLSNAVFAQIVGV

Query:  LTSFSDSDEFKHLPSLA
          S  DS  +K LP  A
Subjt:  LTSFSDSDEFKHLPSLA

A0A6J1C328 uncharacterized protein LOC1110069945.4e-2737.5Show/hide
Query:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVRQ--GRFHHSIGLTKLPVDFKIDVND-------------
        G+  F+  DMKI +DKDVHWLYNI+S G ++ CSL+VDCRN L+  +D +P+  S S D+  Q  G+F+  I +  +   F I VND             
Subjt:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVRQ--GRFHHSIGLTKLPVDFKIDVND-------------

Query:  ----------------------IVSVESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD
                                   +C WF+ A +FG  GS+ W+VKK   +H+CS++++L DH+QATFS IK+
Subjt:  ----------------------IVSVESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD

A0A6J1DNQ8 uncharacterized protein LOC1110223472.4e-2738.64Show/hide
Query:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVND-------------
        G++ FM  DMKI +DKDVHWLYN++  G+ + CSL+VDCRN L+  +D +P+  S S D+     G+FH+SI +T +  +F I+VND             
Subjt:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVND-------------

Query:  --------------------IVS--VESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD
                            IV   +++C W++ A +FG  GS+ W+VKK   +H+CS++++L DH+QATFS IK+
Subjt:  --------------------IVS--VESCGWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKD

A0A6J1DXF3 uncharacterized protein LOC1110254514.3e-1638.62Show/hide
Query:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVNDIVSVESCG--WFV
        G++ F+  DMKI++DKDV+WL+N+   G ++ CSL+VDCRN L+  +D +P+  S S D+     G+FHHSI +  +  +F I+VND    + CG     
Subjt:  GSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDS--VRQGRFHHSIGLTKLPVDFKIDVNDIVSVESCG--WFV

Query:  RACRFGGDGSDAWVVKKIDGDHSCSV--DVILTDHQQATFSFIKD
         A R      D +  + I  +   ++    IL DH+QATFS IK+
Subjt:  RACRFGGDGSDAWVVKKIDGDHSCSV--DVILTDHQQATFSFIKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGATTTTGTTCGTTTCAAGCCGAGAAGAAGCATGGGAGAAAGTAGTTCGAGGATCATCACATTTCATGAATAACGACATGAAGATTGTGGAAGACAAGGATGTACA
TTGGTTGTACAACATTTTGTCTAAAGGTATTTTAGAATTTTGTTCTCTAATAGTTGATTGTAGAAATAGTTTGGCTATTTTTGTCGATAATATACCGTTGATTGGTTCAA
TCTCAACCGACTCAGTTCGACAAGGTCGATTTCATCATTCTATTGGTCTCACAAAGTTGCCTGTAGATTTTAAGATTGATGTGAATGACATTGTTTCTGTTGAAAGTTGT
GGTTGGTTTGTTCGTGCATGCCGCTTTGGAGGTGATGGAAGTGACGCTTGGGTAGTCAAGAAAATTGATGGTGATCATTCATGTTCCGTGGATGTTATATTGACTGATCA
CCAGCAAGCAACATTCTCTTTTATAAAAGACCCAAAGCCCGACCCTCATGCCACCGTTGTCGTCGCAGCAAGCACGCCATCGTCGTGGATCTCTCGTGACCAGCAGCTCG
AAGCTTTGTCTTTCGTGTTTTCATCTTTGTCCAACGCCGTCTTTGCTCAGATCGTGGGTGTTTTGACATCATTTAGCGATTCCGATGAGTTTAAGCACTTACCCAGTCTT
GCGCTGTCTAAGTGTTCGGTTGGGTTCGAATCACTGGCCTTAGATATGGTTGCCCATGGTCTAAAACTTTTGGGTTTTCACTTTAGGGGATGTTGGAAGGCTGTCCAGCA
AAGAAATGAGCTTAGTAAAGTGGATTTGGTGCGCAGCGTGGCGTGTAATTCACGTGTTAAGATGCGTTACATGATGCAGAAATCATGTTCGTGGCGCGGAATTCGCATGC
TGGATTTGCAGAGCATGACACGAAAATCATGTGTAGTTGCGGAGCATGACGCAAAAATCATGTGTGGTATTGTAGAACATGATGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGATTTTGTTCGTTTCAAGCCGAGAAGAAGCATGGGAGAAAGTAGTTCGAGGATCATCACATTTCATGAATAACGACATGAAGATTGTGGAAGACAAGGATGTACA
TTGGTTGTACAACATTTTGTCTAAAGGTATTTTAGAATTTTGTTCTCTAATAGTTGATTGTAGAAATAGTTTGGCTATTTTTGTCGATAATATACCGTTGATTGGTTCAA
TCTCAACCGACTCAGTTCGACAAGGTCGATTTCATCATTCTATTGGTCTCACAAAGTTGCCTGTAGATTTTAAGATTGATGTGAATGACATTGTTTCTGTTGAAAGTTGT
GGTTGGTTTGTTCGTGCATGCCGCTTTGGAGGTGATGGAAGTGACGCTTGGGTAGTCAAGAAAATTGATGGTGATCATTCATGTTCCGTGGATGTTATATTGACTGATCA
CCAGCAAGCAACATTCTCTTTTATAAAAGACCCAAAGCCCGACCCTCATGCCACCGTTGTCGTCGCAGCAAGCACGCCATCGTCGTGGATCTCTCGTGACCAGCAGCTCG
AAGCTTTGTCTTTCGTGTTTTCATCTTTGTCCAACGCCGTCTTTGCTCAGATCGTGGGTGTTTTGACATCATTTAGCGATTCCGATGAGTTTAAGCACTTACCCAGTCTT
GCGCTGTCTAAGTGTTCGGTTGGGTTCGAATCACTGGCCTTAGATATGGTTGCCCATGGTCTAAAACTTTTGGGTTTTCACTTTAGGGGATGTTGGAAGGCTGTCCAGCA
AAGAAATGAGCTTAGTAAAGTGGATTTGGTGCGCAGCGTGGCGTGTAATTCACGTGTTAAGATGCGTTACATGATGCAGAAATCATGTTCGTGGCGCGGAATTCGCATGC
TGGATTTGCAGAGCATGACACGAAAATCATGTGTAGTTGCGGAGCATGACGCAAAAATCATGTGTGGTATTGTAGAACATGATGCGTAA
Protein sequenceShow/hide protein sequence
MWILFVSSREEAWEKVVRGSSHFMNNDMKIVEDKDVHWLYNILSKGILEFCSLIVDCRNSLAIFVDNIPLIGSISTDSVRQGRFHHSIGLTKLPVDFKIDVNDIVSVESC
GWFVRACRFGGDGSDAWVVKKIDGDHSCSVDVILTDHQQATFSFIKDPKPDPHATVVVAASTPSSWISRDQQLEALSFVFSSLSNAVFAQIVGVLTSFSDSDEFKHLPSL
ALSKCSVGFESLALDMVAHGLKLLGFHFRGCWKAVQQRNELSKVDLVRSVACNSRVKMRYMMQKSCSWRGIRMLDLQSMTRKSCVVAEHDAKIMCGIVEHDA