; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034526 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034526
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationscaffold4:14767009..14767545
RNA-Seq ExpressionSpg034526
SyntenySpg034526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]3.9e-2938.46Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + A+Q WR+I YP SL ARV+K K+F  G  +  S G N S  WRSI +G +L KKG  W++ N  ++ +   PW+P+D   +PI    N +   ++ L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQ----QELLWK
           G W+   +  +F   DAE ILNI I   ++ED I W  D  G+FS++S YRL  QL +  E+S S  +      E++WK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQ----QELLWK

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]7.8e-3038.2Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + AKQ WR++RYP SL+ARV+K +++K   F  A  G NPS+ WRSI+WG ++ KKG RW+I +   V V    WIP+    +PI          +A L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK
        +S+  W  + ++  FM+ D E IL I +    +EDE++W  D KG +S+KS Y+L +     +E   S  +    LWK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]1.4e-4249.06Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        M AKQ WRI+R+P SLLA+ ++GK+FK G FL A  G  PSY WRSI+WGR+LFKKGYRWK+ N  ++++   PW+P+DG+  P+  H + +NF++A L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQL
          +G W+E  ++  F+ S+A+ IL   +   +K+DEI+W +D  GIFS++S Y LGIQL
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQL

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]4.9e-3238.89Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + AKQ WRI+++P SL+ARV+K ++FK   F+ A  G  PS+ WRSI+WGR++  KG RW+I N  NV V    WIP+    KPI       + T+A+L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQ--ELLWK
        + +  W E+L+   F   DAE I+ I +    KED+++W  D KG +S+KS Y++ ++++   + S S++ Q     +WK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQ--ELLWK

XP_024043257.1 uncharacterized protein LOC112099952 [Citrus clementina]6.6e-2935.96Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + AKQ WRI++ P SL+A+V+K ++FK G  + A  G  PS+ WRS++WGR++ ++G RW+I N  NV V    WIP     +PI     + + T+A+L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK
        +S+  W E+L+   F   DA+ I  I +     +D+++W  D +G +S+KS Y++ +Q++   + S S   Q  ++WK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK

TrEMBL top hitse value%identityAlignment
A0A1S8ACU2 Ribonuclease H-like superfamily protein1.4e-2937.43Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + AKQ WRII+YP+SL+A++++ K+FK   FL A  G  PS+ WRSIIWGR++   G RW+I     V +    WIP+    KPI       + T+A+L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQ--SASEASVSDYHQQELLW
        +    W E L++  F   DAE I  I +  + K D+I+W  D KG +S+KS Y++ ++++  +   +S S+  Q  ++W
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQ--SASEASVSDYHQQELLW

A0A5S6RD43 Putative reverse transcriptase1.9e-2938.46Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + A+Q WR+I YP SL ARV+K K+F  G  +  S G N S  WRSI +G +L KKG  W++ N  ++ +   PW+P+D   +PI    N +   ++ L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQ----QELLWK
           G W+   +  +F   DAE ILNI I   ++ED I W  D  G+FS++S YRL  QL +  E+S S  +      E++WK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQ----QELLWK

A0A6J1DRA0 uncharacterized protein LOC1110224236.6e-4349.06Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        M AKQ WRI+R+P SLLA+ ++GK+FK G FL A  G  PSY WRSI+WGR+LFKKGYRWK+ N  ++++   PW+P+DG+  P+  H + +NF++A L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQL
          +G W+E  ++  F+ S+A+ IL   +   +K+DEI+W +D  GIFS++S Y LGIQL
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQL

A0A803PJK4 Uncharacterized protein1.4e-2937.08Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + AKQ WRI+  P SL +R++K ++FK G FL A  G  PS TWR I+WG+EL + G RWK+ N L +     PW+P     KP+L   +  N T+++L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK
        +    W+   +K+ F++ D + IL+I +   + +D+I+W  ++ GI+++KS Y L  +       SVS +  Q  LWK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK

Q94HY0 Retrotransposon protein, putative, unclassified1.9e-2938.46Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL
        + A+Q WR+I YP SL ARV+K K+F  G  +  S G N S  WRSI +G +L KKG  W++ N  ++ +   PW+P+D   +PI    N +   ++ L+
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLL

Query:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQ----QELLWK
           G W+   +  +F   DAE ILNI I   ++ED I W  D  G+FS++S YRL  QL +  E+S S  +      E++WK
Subjt:  NSQGLWNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQ----QELLWK

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.7e-0939.47Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWI
        + AKQ +RII  P +LL+R+++ ++F     +  S G  PSY WRSII GREL  +G    I + ++  V +  WI
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWI

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein3.1e-0826.62Show/hide
Query:  IKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGH-EKPILVHPNSQNFTMAQLLNSQG---LWNEELMKAFFM
        +K ++FK    L A      SY W S++ G  L KKG R  I +  N+ + +   +  D H  +P+      +  T+  L   +G    W++  +  F  
Subjt:  IKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGH-EKPILVHPNSQNFTMAQLLNSQG---LWNEELMKAFFM

Query:  ESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRL
        +SD   I  I +  + K D+I+W+ ++ G ++++S Y L
Subjt:  ESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRL

AT4G29090.1 Ribonuclease H-like superfamily protein4.1e-1325.77Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWI---PKDGHEKPILVHPN-----SQ
        +  KQ WR++  P+SL+A+V K ++F     L A  G  PS+ W+SI   +E+ ++G R  + N  ++ +    W+   P     +   V P      S 
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWI---PKDGHEKPILVHPN-----SQ

Query:  NFTMAQLLNSQGL-WNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQL-------QSASEASVSDYHQQELLWK
           ++ L++  G  W +++++  F E + + I  +        D   WD  S G +++KS Y +  Q+       Q  SE S++  +Q+  +WK
Subjt:  NFTMAQLLNSQGL-WNEELMKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQL-------QSASEASVSDYHQQELLWK

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-1039.47Show/hide
Query:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWI
        + AKQ +RII  P +LL+R+++ ++F     +  S G  PSY WRSII GREL  +G    I + ++  V +  WI
Subjt:  MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGCAAAGCAATGTTGGAGGATAATTAGATACCCTAAAAGCCTTTTGGCGCGAGTTATCAAAGGCAAACATTTTAAGATGGGTCATTTCCTGTATGCGTCTTCGGG
GCATAATCCATCTTACACTTGGAGAAGCATTATCTGGGGCCGTGAACTGTTCAAAAAGGGCTACCGATGGAAGATTGAGAATGTCTTAAATGTGGATGTGCTTATTAAGC
CATGGATTCCAAAGGATGGCCATGAGAAACCCATCCTAGTGCATCCCAATAGTCAAAATTTCACTATGGCTCAGCTTTTAAATTCACAAGGATTATGGAATGAAGAGTTA
ATGAAAGCTTTTTTCATGGAAAGTGACGCGGAGACTATTTTGAATATCTCGATCATTCCAAATAACAAGGAGGATGAGATCATGTGGGATCTTGATTCAAAAGGAATTTT
CTCCATAAAAAGCACGTATAGATTGGGTATTCAGCTCCAATCAGCTAGTGAAGCCTCTGTTTCAGACTATCACCAGCAGGAACTGCTCTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGCAAAGCAATGTTGGAGGATAATTAGATACCCTAAAAGCCTTTTGGCGCGAGTTATCAAAGGCAAACATTTTAAGATGGGTCATTTCCTGTATGCGTCTTCGGG
GCATAATCCATCTTACACTTGGAGAAGCATTATCTGGGGCCGTGAACTGTTCAAAAAGGGCTACCGATGGAAGATTGAGAATGTCTTAAATGTGGATGTGCTTATTAAGC
CATGGATTCCAAAGGATGGCCATGAGAAACCCATCCTAGTGCATCCCAATAGTCAAAATTTCACTATGGCTCAGCTTTTAAATTCACAAGGATTATGGAATGAAGAGTTA
ATGAAAGCTTTTTTCATGGAAAGTGACGCGGAGACTATTTTGAATATCTCGATCATTCCAAATAACAAGGAGGATGAGATCATGTGGGATCTTGATTCAAAAGGAATTTT
CTCCATAAAAAGCACGTATAGATTGGGTATTCAGCTCCAATCAGCTAGTGAAGCCTCTGTTTCAGACTATCACCAGCAGGAACTGCTCTGGAAATGA
Protein sequenceShow/hide protein sequence
MFAKQCWRIIRYPKSLLARVIKGKHFKMGHFLYASSGHNPSYTWRSIIWGRELFKKGYRWKIENVLNVDVLIKPWIPKDGHEKPILVHPNSQNFTMAQLLNSQGLWNEEL
MKAFFMESDAETILNISIIPNNKEDEIMWDLDSKGIFSIKSTYRLGIQLQSASEASVSDYHQQELLWK