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Spg034546 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034546
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSNF2 domain-containing protein / helicase domain-containing protein
Genome locationscaffold4:15219341..15220782
RNA-Seq ExpressionSpg034546
SyntenySpg034546
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR038718 - SNF2-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153190.1 probable helicase CHR10 [Momordica charantia]1.7e-2285.94Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        M+YERRL+AAAKLILLDDSR DN  E CPDFGVTATLKPYQ+EGVLWLIRRY LGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
XP_022959610.1 probable helicase CHR10 isoform X1 [Cucurbita moschata]1.0e-2285.94Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS + CPD GVTATLKPYQ+EGVLWLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
XP_023004934.1 probable helicase CHR10 isoform X1 [Cucurbita maxima]1.7e-2285.94Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS + CPD GVTATLKPYQ+EGVLWLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
XP_023515240.1 probable helicase CHR10 isoform X1 [Cucurbita pepo subsp. pepo]2.9e-2284.38Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS + CPD GVTATLKPYQ+EGVLWLIRRYHLGVN ILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
XP_038876157.1 probable helicase CHR10 isoform X1 [Benincasa hispida]3.4e-2387.5Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYE RLKAAAKLILL DS  DNS E CPDFGVTATLKPYQ+EGVLWLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
TrEMBL top hitse value%identityAlignment
A0A1S3CAH8 probable helicase CHR10 isoform X22.3e-2081.25Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS     DFGVTATLKPYQ++GV WLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
A0A1S3CC69 probable helicase CHR10 isoform X12.3e-2081.25Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS     DFGVTATLKPYQ++GV WLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
A0A6J1DG36 probable helicase CHR108.3e-2385.94Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        M+YERRL+AAAKLILLDDSR DN  E CPDFGVTATLKPYQ+EGVLWLIRRY LGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
A0A6J1H6S3 probable helicase CHR10 isoform X14.8e-2385.94Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS + CPD GVTATLKPYQ+EGVLWLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
A0A6J1KW01 probable helicase CHR10 isoform X18.3e-2385.94Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
        MNYERRLKAAAKLILL DS  DNS + CPD GVTATLKPYQ+EGVLWLIRRYHLGVNVILGDE+
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEV
SwissProt top hitse value%identityAlignment
F4IV45 Probable helicase CHR102.3e-1460Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVIL
        M YERRL+AAA++IL  +++  N+   C +FGVTATLKP+Q+EGV WLI++Y LGVNV+L
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVIL
Arabidopsis top hitse value%identityAlignment
AT2G44980.1 SNF2 domain-containing protein / helicase domain-containing protein1.7e-1560Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVIL
        M YERRL+AAA++IL  +++  N+   C +FGVTATLKP+Q+EGV WLI++Y LGVNV+L
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVIL
AT2G44980.2 SNF2 domain-containing protein / helicase domain-containing protein1.7e-1560Show/hide
Query:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVIL
        M YERRL+AAA++IL  +++  N+   C +FGVTATLKP+Q+EGV WLI++Y LGVNV+L
Subjt:  MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVIL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTACGAGAGAAGGCTAAAAGCAGCGGCGAAGCTCATACTTCTCGACGATTCTCGCCCCGACAACTCGCTGGAACCCTGCCCGGACTTCGGTGTTACGGCGACTCT
CAAACCCTACCAACTCGAAGGAGTCCTATGGCTCATTCGGCGATATCATCTCGGCGTCAACGTCATTCTCGGTGATGAGGTATGGACGTATGGTTTCTTTACCGTCAAGA
TGTTGGAGTATGGTTGCATTACAGTCAATGCACTTTATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTACGAGAGAAGGCTAAAAGCAGCGGCGAAGCTCATACTTCTCGACGATTCTCGCCCCGACAACTCGCTGGAACCCTGCCCGGACTTCGGTGTTACGGCGACTCT
CAAACCCTACCAACTCGAAGGAGTCCTATGGCTCATTCGGCGATATCATCTCGGCGTCAACGTCATTCTCGGTGATGAGGTATGGACGTATGGTTTCTTTACCGTCAAGA
TGTTGGAGTATGGTTGCATTACAGTCAATGCACTTTATGCTTGA
Protein sequenceShow/hide protein sequence
MNYERRLKAAAKLILLDDSRPDNSLEPCPDFGVTATLKPYQLEGVLWLIRRYHLGVNVILGDEVWTYGFFTVKMLEYGCITVNALYA