CuGenDBv2

Gene ID	Spg034549
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	COP9 signalosome complex subunit 7
Genome location	scaffold4:14805250..14806610
RNA-Seq Expression	Spg034549
Synteny	Spg034549
Gene Ontology terms	GO:0032991 - protein-containing complex (cellular component) GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6592933.1 COP9 signalosome complex subunit 7, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-06

54.55

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  N+SG+ +K  K++ +  E       + ADID RGHEE+YSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

XP_002273686.1 PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Vitis vinifera]

2.4e-06

56.36

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W   +S + +K  K++ +  E     F   ADIDFRGHEEIYSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

XP_010661395.1 PREDICTED: COP9 signalosome complex subunit 7 isoform X2 [Vitis vinifera]

2.4e-06

56.36

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W   +S + +K  K++ +  E     F   ADIDFRGHEEIYSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

XP_022959597.1 COP9 signalosome complex subunit 7-like isoform X2 [Cucurbita moschata]

1.8e-06

54.55

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  N+SG+ +K  K++ +  E       + ADID RGHEE+YSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

XP_023513464.1 COP9 signalosome complex subunit 7-like isoform X2 [Cucurbita pepo subsp. pepo]

1.8e-06

54.55

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  N+SG+ +K  K++ +  E       + ADID RGHEE+YSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1H4Z6 COP9 signalosome complex subunit 7-like isoform X2

8.9e-07

54.55

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  N+SG+ +K  K++ +  E       + ADID RGHEE+YSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

A0A6J1KS55 COP9 signalosome complex subunit 7-like isoform X2

2.6e-06

52.73

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  N+ G+++K  K++ +  E       + ADID RGHEE+YSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

A0A6M2EVG6 PCI domain-containing protein

4.4e-06

54.55

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Query:  WNPNVSGISRKKQLFKSYEMKH--PVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  + S + +K Q    Y ++         ADIDFRGHEEIYSEPGGVMDYEEDR
Subjt:  WNPNVSGISRKKQLFKSYEMKH--PVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

A9PEE7 PCI domain-containing protein

4.4e-06

54.55

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Query:  WNPNVSGISRKKQLFKSYEMKH--PVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W  + S + +K Q    Y ++         ADIDFRGHEEIYSEPGGVMDYEEDR
Subjt:  WNPNVSGISRKKQLFKSYEMKH--PVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

D7SLY4 PCI domain-containing protein

1.2e-06

56.36

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR
        W   +S + +K  K++ +  E     F   ADIDFRGHEEIYSEPGGVMDYEEDR
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDR

SwissProt top hits

e value

%identity

Alignment

Q94JU3 COP9 signalosome complex subunit 7

8.9e-04

38.89

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEED
        W  N+S + +K  K+  +  E          D+D RG++E++ EP GVMDYEED
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEED

Arabidopsis top hits

e value

%identity

Alignment

AT1G02090.1 Proteasome component (PCI) domain protein

6.3e-05

38.89

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Query:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEED
        W  N+S + +K  K+  +  E          D+D RG++E++ EP GVMDYEED
Subjt:  WNPNVSGISRK--KQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEED

Sequences

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CDS sequence

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ATGTGCAAGTTATCCTCGATTAAGTTGATTTTAGAAGATTGGAATCCTAATGTTTCGGGGATTTCAAGAAAGAAGCAACTATTCAAGAGTTATGAAATGAAGCATCCAGT
ATTTGGGGCTATGGCCGACATTGACTTCCGAGGGCATGAGGAGATCTACTCTGAACCTGGTGGAGTAATGGACTATGAAGAAGATCGAAGAGACGACATCCAATTTCTTA
GAGACGTGCATATGGGAGTTGAACTACAACCTCCTTTAAGGTTCCTGTCTGGTAAACAGTAG

mRNA sequence

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Protein sequence

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MCKLSSIKLILEDWNPNVSGISRKKQLFKSYEMKHPVFGAMADIDFRGHEEIYSEPGGVMDYEEDRRDDIQFLRDVHMGVELQPPLRFLSGKQ

Spg034549 (gene) of Sponge gourd (cylindrica) v1 genome