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Spg034561 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034561
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNephrocystin-3
Genome locationscaffold4:15880043..15887948
RNA-Seq ExpressionSpg034561
SyntenySpg034561
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OKO99396.1 Nephrocystin-3 [Penicillium subrubescens]8.2e-0436.78Show/hide
Query:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT
        LYS QG   E + +Y   LA  +K LGS +  TL      G+ Y+ +G   E + +Y   LA Y+KVLG  N+ TL +    G+ Y+
Subjt:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT

OQD86643.1 hypothetical protein PENANT_c007G05014 [Penicillium antarcticum]6.3e-0435.63Show/hide
Query:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT
        LYS QG   + +++Y   LA  +K L   +  TL      GN YT +G   E + +Y   LA Y+K LG G+ +TL      GN Y+
Subjt:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT

TrEMBL top hitse value%identityAlignment
A0A1Q5TGN1 Nephrocystin-34.0e-0436.78Show/hide
Query:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT
        LYS QG   E + +Y   LA  +K LGS +  TL      G+ Y+ +G   E + +Y   LA Y+KVLG  N+ TL +    G+ Y+
Subjt:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT

A0A1V6QBP5 Uncharacterized protein3.0e-0435.63Show/hide
Query:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT
        LYS QG   + +++Y   LA  +K L   +  TL      GN YT +G   E + +Y   LA Y+K LG G+ +TL      GN Y+
Subjt:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT

A0A1V6WGX0 TPR_REGION domain-containing protein5.2e-0432.18Show/hide
Query:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT
        LYS QG  ++ +++Y   LA ++K LGS + +TL+    +G  Y+ +G   + + +Y   LA ++K  GS +A+TL+     G  Y+
Subjt:  LYS-QGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTTATCAGCAGGATCCTCTTAGAACTTTGGACTTTTTGGAATGTGTTTCAACTCCAATGAAGTTCTACCGATCATGCACTAGGCAATTGGTTATCCCTTACTC
AAATGTTGGTTTATCTACTTTTCTTGTTTCTTCTTGCATATGCCACGTCTTCTCTTGTTTTGCAGGCCACGTCTTTCCCATTCAAATAAATTTACCGTTGATGTCACGTG
AAGGTCAGAAATCTCGAGCAGCTGGGCCACCAAAAGGTCAACTTATCAAAAGGTCCTTGGGAGTGGCAATGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCT
ATACTCCCCGAGGTTAGCAAATTATCAAAAGGTCCTTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCTATACTCCCCAAGGTTAGCAAA
TTATCAAAAGGTCCTTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCTATACTCCCCGAGGTTCCTCGTGGGAGTGGCAACGCCTATACT
CCCCGAGGTTAGCAAATTATCAAAAGGTCCTTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGT
GGCAACGCCTATACTCCCCGAGGCCACGTCTTTCTCATTCAAATAAATTTACCGTTGATGTCACGTGAAGGTCAGCAGAGTTATTACGGCTACGACAACTATGCAAAGAT
TTTCGTATTTTCTTGTCTTCTCCATTACTTCAGTGTGACAATTGGCAACCAATCTTCAATCCATTTGGCTTCTAATACCAATTTTTATTTATGCAAAGCAGTTCTAGAGA
GTCAAAGAATTGAGATCAGGGAGGATCATACTCTTTTTGCTGTTGCAAGCAGGATCTCAAAGCTGATCGAAGAATCCTCCAAGGATAGGGTTGCAGTCAAAGACAACCCG
TTGTTCGAATCTGTCATTCCAACATCTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTTATCAGCAGGATCCTCTTAGAACTTTGGACTTTTTGGAATGTGTTTCAACTCCAATGAAGTTCTACCGATCATGCACTAGGCAATTGGTTATCCCTTACTC
AAATGTTGGTTTATCTACTTTTCTTGTTTCTTCTTGCATATGCCACGTCTTCTCTTGTTTTGCAGGCCACGTCTTTCCCATTCAAATAAATTTACCGTTGATGTCACGTG
AAGGTCAGAAATCTCGAGCAGCTGGGCCACCAAAAGGTCAACTTATCAAAAGGTCCTTGGGAGTGGCAATGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCT
ATACTCCCCGAGGTTAGCAAATTATCAAAAGGTCCTTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCTATACTCCCCAAGGTTAGCAAA
TTATCAAAAGGTCCTTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCTATACTCCCCGAGGTTCCTCGTGGGAGTGGCAACGCCTATACT
CCCCGAGGTTAGCAAATTATCAAAAGGTCCTTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGTGGCAACGCCTATACTCTCAAGGTTCCTCGTGGGAGT
GGCAACGCCTATACTCCCCGAGGCCACGTCTTTCTCATTCAAATAAATTTACCGTTGATGTCACGTGAAGGTCAGCAGAGTTATTACGGCTACGACAACTATGCAAAGAT
TTTCGTATTTTCTTGTCTTCTCCATTACTTCAGTGTGACAATTGGCAACCAATCTTCAATCCATTTGGCTTCTAATACCAATTTTTATTTATGCAAAGCAGTTCTAGAGA
GTCAAAGAATTGAGATCAGGGAGGATCATACTCTTTTTGCTGTTGCAAGCAGGATCTCAAAGCTGATCGAAGAATCCTCCAAGGATAGGGTTGCAGTCAAAGACAACCCG
TTGTTCGAATCTGTCATTCCAACATCTAAGTAG
Protein sequenceShow/hide protein sequence
MQSYQQDPLRTLDFLECVSTPMKFYRSCTRQLVIPYSNVGLSTFLVSSCICHVFSCFAGHVFPIQINLPLMSREGQKSRAAGPPKGQLIKRSLGVAMPILSRFLVGVATP
ILPEVSKLSKGPWEWQRLYSQGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTPRGSSWEWQRLYSPRLANYQKVLGSGNAYTLKVPRGSGNAYTLKVPRGS
GNAYTPRGHVFLIQINLPLMSREGQQSYYGYDNYAKIFVFSCLLHYFSVTIGNQSSIHLASNTNFYLCKAVLESQRIEIREDHTLFAVASRISKLIEESSKDRVAVKDNP
LFESVIPTSK