; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034584 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034584
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold4:11922379..11931934
RNA-Seq ExpressionSpg034584
SyntenySpg034584
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]4.1e-0935.54Show/hide
Query:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK
        TS  NT + +S    R    SRS+E Q  +   P  +A  +  ++++  +  I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RMAE+EK
Subjt:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK

Query:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV
        K++ML+K VEE+D EIA L+N +ESRD AES            +++N ++G  ++   + Q   S+
Subjt:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV

KAA0055891.1 uncharacterized protein E6C27_scaffold438G00090 [Cucumis melo var. makuwa]1.4e-6247.47Show/hide
Query:  EDIPEIVACHVVNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSKAPKEE-------ASSNAPILRYVPLSRHKKGESPFTECSEILKVGD
        ED+ EI++  V  T  +G   +       K+S  + DA   Q    S    K +AP+ E         SN P+L Y+  SRHKKGESPF ECS+ L V +
Subjt:  EDIPEIVACHVVNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSKAPKEE-------ASSNAPILRYVPLSRHKKGESPFTECSEILKVGD

Query:  VEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPP

Query:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------
        +PVRIT  RK KVA+  HIT+EE  D E+ KND SQ+ SVFDRI       SV Q +  S  +   Q  T +  R S F RL+ + +KKV   S      
Subjt:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------

Query:  RSVFDRL--QATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE
        +S F RL    T GQ K  +  L   +S  + ++ E  S  PSRMKRK  V +NTE
Subjt:  RSVFDRL--QATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.9e-6334.66Show/hide
Query:  VVSHSVTRISRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKIVEEKD
        VV+ +  + S+ KE + E      IA+ ML ++ E   +++   +          S+Q      P+        +   E+     E    ++L++  EK 
Subjt:  VVSHSVTRISRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKIVEEKD

Query:  QEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVT
         ++          D+ E  +  D  Q++   +E +DEGW +VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VT
Subjt:  QEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVT

Query:  LKDFFPKNFLNDDHEDIPEIVA-----------------CHVVNTLEEG----------------------------DSSSS------------------
        L DFFP  FL D  ++ P +VA                 C  ++  +E                             D+ S+                  
Subjt:  LKDFFPKNFLNDDHEDIPEIVA-----------------CHVVNTLEEG----------------------------DSSSS------------------

Query:  --------------------------------------PSQN----------AKKESIEEVDACEVQSKEASAHPAKSKAPKEEASSNAPILRYVPLSRH
                                              P  N          A +ES +          EAS   AKS    +E +SN PILRYVPLSR 
Subjt:  --------------------------------------PSQN----------AKKESIEEVDACEVQSKEASAHPAKSKAPKEEASSNAPILRYVPLSRH

Query:  KKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQ
        KKGESPF E  + LKVGD+E+LKE+FTTPLT ITKQEI   K D  + +LP+RRTK GFDP AYK + KAGYDFTTHTEFKSLKI + + +LS TQKKL 
Subjt:  KKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQ

Query:  KEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRL
        +EG+ IP SR GLGY PP+P+RITRK   KV D++HIT++E+   E+K+  DSQ+ S FDR+        V + L     E++    TS+  RRS F RL
Subjt:  KEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRL

Query:  SVS
        +++
Subjt:  SVS

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]2.5e-6245.87Show/hide
Query:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI
        ED+ EI++  V     T +      +  +++K +++      E+ ++     P   K A  ++  SN P+LRY+PLSR KKGESPFTECS+ L V + EI
Subjt:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI

Query:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV
        LKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY IP+SRAG+GY   +PV
Subjt:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI       SV Q +  S  +   Q  T +  R S F RL+ S +KKV   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE
        F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NTE
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]3.0e-0733.73Show/hide
Query:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK
        TS  NT + +S    R    SRS+E Q  +   P  +A  + +++++  +  I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RM  +EK
Subjt:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK

Query:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV
        K++M +K VEE+D EIA L+N +ESRD AES            +++N ++G  ++   + Q   S+
Subjt:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]2.5e-6245.87Show/hide
Query:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI
        ED+ EI++  V     T +      +  +++K +++      E+ ++     P   K A  ++  SN P+LRY+PLSR KKGESPFTECS+ L V + EI
Subjt:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI

Query:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV
        LKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY IP+SRAG+GY   +PV
Subjt:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI       SV Q +  S  +   Q  T +  R S F RL+ S +KKV   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE
        F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NTE
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.1e-6532.97Show/hide
Query:  QDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHV
        Q++   +E +DE W +VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+ +E++DF  ++  +TL DFFP  FL D  ++ P +VACH 
Subjt:  QDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHV

Query:  VNTLEEG---------------------------------------------------------------------------------------------
        +N  EE                                                                                              
Subjt:  VNTLEEG---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------DSSSSPSQNA-----------KKESIEEVDACEV--------------
                                                            ++ S+P   A           K +S  EV + EV              
Subjt:  ----------------------------------------------------DSSSSPSQNA-----------KKESIEEVDACEV--------------

Query:  --------------QSKEASAHPAKSKAPKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPE
                      +  EAS   AKS    +E +SN  ILRYVPLSR KKGESPF E  + LKVGD+E+LKE+FTTPLT ITKQEI   K D T+ +LP+
Subjt:  --------------QSKEASAHPAKSKAPKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPE

Query:  RRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDD
        RRTK  FDP AYKL+ KAGYDFTTHTEFKSLKI + + +LS TQKKL +EG+ IP SR GLGY  P+P+RITRK   K+ D++HIT++E+ D   +K  D
Subjt:  RRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDD

Query:  SQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPSRSVFDRL-------------------QATYGQCKGKLKSL
        SQ+ S FDRI        V + L  +  E++    TS   RRS F RLS++  K    P   + +RL                     +      ++K +
Subjt:  SQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPSRSVFDRL-------------------QATYGQCKGKLKSL

Query:  ETEESD------EMNDNNEFSSTVPSRMKRKPFVLIN
          E         E+    E  S VPSRMKRK FV +N
Subjt:  ETEESD------EMNDNNEFSSTVPSRMKRKPFVLIN

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H1.2e-6245.87Show/hide
Query:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI
        ED+ EI++  V     T +      +  +++K +++      E+ ++     P   K A  ++  SN P+LRY+PLSR KKGESPFTECS+ L V + EI
Subjt:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI

Query:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV
        LKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY IP+SRAG+GY   +PV
Subjt:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI       SV Q +  S  +   Q  T +  R S F RL+ S +KKV   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE
        F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NTE
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE

A0A5A7TZU9 Ribonuclease H2.0e-0935.54Show/hide
Query:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK
        TS  NT + +S    R    SRS+E Q  +   P  +A  +  ++++  +  I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RMAE+EK
Subjt:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK

Query:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV
        K++ML+K VEE+D EIA L+N +ESRD AES            +++N ++G  ++   + Q   S+
Subjt:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV

A0A5A7TZU9 Ribonuclease H1.2e-6245.87Show/hide
Query:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI
        ED+ EI++  V     T +      +  +++K +++      E+ ++     P   K A  ++  SN P+LRY+PLSR KKGESPFTECS+ L V + EI
Subjt:  EDIPEIVACHV---VNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSK-APKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEI

Query:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV
        LKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY IP+SRAG+GY   +PV
Subjt:  LKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI       SV Q +  S  +   Q  T +  R S F RL+ S +KKV   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE
        F RL  +  + + K     + +S  +  + E  S  PSRMKRK FV +NTE
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE

A0A5A7UQP2 Integrase catalytic domain-containing protein7.0e-6347.47Show/hide
Query:  EDIPEIVACHVVNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSKAPKEE-------ASSNAPILRYVPLSRHKKGESPFTECSEILKVGD
        ED+ EI++  V  T  +G   +       K+S  + DA   Q    S    K +AP+ E         SN P+L Y+  SRHKKGESPF ECS+ L V +
Subjt:  EDIPEIVACHVVNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEASAHPAKSKAPKEE-------ASSNAPILRYVPLSRHKKGESPFTECSEILKVGD

Query:  VEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPP
         EILKENFT PLT I K E ++ +    +  LPERRT  GFDP AYKL+ KAGYDFTT TE KS+KIFD R ELSPTQKKLQK+GY IP+SRAG+GY   
Subjt:  VEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPP

Query:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------
        +PVRIT  RK KVA+  HIT+EE  D E+ KND SQ+ SVFDRI       SV Q +  S  +   Q  T +  R S F RL+ + +KKV   S      
Subjt:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPS------

Query:  RSVFDRL--QATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE
        +S F RL    T GQ K  +  L   +S  + ++ E  S  PSRMKRK  V +NTE
Subjt:  RSVFDRL--QATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTE

A0A5D3BIH8 Uncharacterized protein1.4e-0733.73Show/hide
Query:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK
        TS  NT + +S    R    SRS+E Q  +   P  +A  + +++++  +  I   E+  + +  S S++ N E   P++MSVM+TD  TSE+RM  +EK
Subjt:  TSVPNTKRVVSHSVTR---ISRSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPN-ETSSPDVMSVMMTDAGTSEERMAEVEK

Query:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV
        K++M +K VEE+D EIA L+N +ESRD AES            +++N ++G  ++   + Q   S+
Subjt:  KISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSV

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.4e-6334.66Show/hide
Query:  VVSHSVTRISRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKIVEEKD
        VV+ +  + S+ KE + E      IA+ ML ++ E   +++   +          S+Q      P+        +   E+     E    ++L++  EK 
Subjt:  VVSHSVTRISRSKETQHEDSQTPVIANKMLRRMTESAQLEIATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKIVEEKD

Query:  QEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVT
         ++          D+ E  +  D  Q++   +E +DEGW +VTRRKK+K   +Q+E  ++ NYRR N +QK K+K K +RK KLV E+++DF  ++  VT
Subjt:  QEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVT

Query:  LKDFFPKNFLNDDHEDIPEIVA-----------------CHVVNTLEEG----------------------------DSSSS------------------
        L DFFP  FL D  ++ P +VA                 C  ++  +E                             D+ S+                  
Subjt:  LKDFFPKNFLNDDHEDIPEIVA-----------------CHVVNTLEEG----------------------------DSSSS------------------

Query:  --------------------------------------PSQN----------AKKESIEEVDACEVQSKEASAHPAKSKAPKEEASSNAPILRYVPLSRH
                                              P  N          A +ES +          EAS   AKS    +E +SN PILRYVPLSR 
Subjt:  --------------------------------------PSQN----------AKKESIEEVDACEVQSKEASAHPAKSKAPKEEASSNAPILRYVPLSRH

Query:  KKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQ
        KKGESPF E  + LKVGD+E+LKE+FTTPLT ITKQEI   K D  + +LP+RRTK GFDP AYK + KAGYDFTTHTEFKSLKI + + +LS TQKKL 
Subjt:  KKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQ

Query:  KEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRL
        +EG+ IP SR GLGY PP+P+RITRK   KV D++HIT++E+   E+K+  DSQ+ S FDR+        V + L     E++    TS+  RRS F RL
Subjt:  KEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRL

Query:  SVS
        +++
Subjt:  SVS

A0A5D3C0W6 Ty3-gypsy retrotransposon protein2.0e-6532.97Show/hide
Query:  QDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHV
        Q++   +E +DE W +VTRRKK+K   +Q+E   +RNYRR N +QK K+K K +RK KL+ +E++DF  ++  +TL DFFP  FL D  ++ P +VACH 
Subjt:  QDQLESVENEDEGWNLVTRRKKQKKHSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHV

Query:  VNTLEEG---------------------------------------------------------------------------------------------
        +N  EE                                                                                              
Subjt:  VNTLEEG---------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------DSSSSPSQNA-----------KKESIEEVDACEV--------------
                                                            ++ S+P   A           K +S  EV + EV              
Subjt:  ----------------------------------------------------DSSSSPSQNA-----------KKESIEEVDACEV--------------

Query:  --------------QSKEASAHPAKSKAPKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPE
                      +  EAS   AKS    +E +SN  ILRYVPLSR KKGESPF E  + LKVGD+E+LKE+FTTPLT ITKQEI   K D T+ +LP+
Subjt:  --------------QSKEASAHPAKSKAPKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPE

Query:  RRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDD
        RRTK  FDP AYKL+ KAGYDFTTHTEFKSLKI + + +LS TQKKL +EG+ IP SR GLGY  P+P+RITRK   K+ D++HIT++E+ D   +K  D
Subjt:  RRTKAGFDPNAYKLLEKAGYDFTTHTEFKSLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDD

Query:  SQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPSRSVFDRL-------------------QATYGQCKGKLKSL
        SQ+ S FDRI        V + L  +  E++    TS   RRS F RLS++  K    P   + +RL                     +      ++K +
Subjt:  SQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPARRSVFHRLSVSTSKKVDEPSRSVFDRL-------------------QATYGQCKGKLKSL

Query:  ETEESD------EMNDNNEFSSTVPSRMKRKPFVLIN
          E         E+    E  S VPSRMKRK FV +N
Subjt:  ETEESD------EMNDNNEFSSTVPSRMKRKPFVLIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGGCTCATTGAGTCGGCGTACTGGTCATTCTCACCCATACAAATCAAAGGACAATCCTTCGTCAACAGGAGTCCATAATCCACTCAGGATTCAGACTAAGTTGCC
TAGTTCGGTCTTATGCAAACTCATTGCATATGATACCCCCACTTGCATGTCTACTACATGGACGCTTTGGATCAATACGTCTGTACCAAATACAAAGCGGGTCGTATCAC
ATAGTGTTACCAGGATAAGTCGCTCCAAGGAAACCCAACATGAAGACAGTCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAA
ATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAAC
TAGTGAAGAACGAATGGCTGAAGTAGAGAAGAAAATCAGCATGTTACTGAAGATAGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTTAGGAACCAGATGGAAAGTCGGG
ATGTTGCTGAATCGAAATCTGCAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGAATTTGGTAACTCGTCGAAAGAAGCAAAAGAAA
CATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAGTTGTCGA
AGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGACGATCATGAGGACATCCCTGAGATAGTCGCATGTC
ATGTTGTCAATACACTTGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCA
TCCGCTCACCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCGAACGCCCCTATATTGCGCTACGTTCCTTTATCTCGACACAAGAAAGGGGAATCACCATTCAC
AGAATGTTCAGAAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATC
GTACCAAAGTAACTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAA
AGTCTAAAAATCTTTGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATGTCATACCATCCTCGAGAGCCGGACTAGGGTACAATCCCCC
AAAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCT
CTGTCTTCGATCGCATTAAAGCGCCAACTACTCATCTTTCAGTTCATCAGTGGCTGAAATATTCATCTTTGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTGCCCGA
CGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCAAAGAAAGTAGATGAACCTTCGAGATCCGTGTTCGACCGCCTTCAAGCAACATATGGCCAATGCAAGGGAAAGTT
GAAAAGTCTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGAATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAG
TGAATTATGATGAGAAACAAGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGGCTCATTGAGTCGGCGTACTGGTCATTCTCACCCATACAAATCAAAGGACAATCCTTCGTCAACAGGAGTCCATAATCCACTCAGGATTCAGACTAAGTTGCC
TAGTTCGGTCTTATGCAAACTCATTGCATATGATACCCCCACTTGCATGTCTACTACATGGACGCTTTGGATCAATACGTCTGTACCAAATACAAAGCGGGTCGTATCAC
ATAGTGTTACCAGGATAAGTCGCTCCAAGGAAACCCAACATGAAGACAGTCAAACTCCTGTCATTGCAAACAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAA
ATCGCCACTGCAGAAGATCTGATGCTTGGCAAATTCATCTCTTCTTCTCAGCAACCAAACGAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAAC
TAGTGAAGAACGAATGGCTGAAGTAGAGAAGAAAATCAGCATGTTACTGAAGATAGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTTAGGAACCAGATGGAAAGTCGGG
ATGTTGCTGAATCGAAATCTGCAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGAATTTGGTAACTCGTCGAAAGAAGCAAAAGAAA
CATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCAGAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAGTTGTCGA
AGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGACGATCATGAGGACATCCCTGAGATAGTCGCATGTC
ATGTTGTCAATACACTTGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGAAGAAGGAGTCGATCGAAGAAGTAGATGCTTGTGAAGTTCAATCAAAGGAAGCA
TCCGCTCACCCTGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCGTCGAACGCCCCTATATTGCGCTACGTTCCTTTATCTCGACACAAGAAAGGGGAATCACCATTCAC
AGAATGTTCAGAAATTTTGAAGGTTGGTGATGTGGAGATTCTAAAAGAAAATTTCACCACACCTCTGACAGCAATTACCAAGCAAGAGATTCAGGAATCAAAGACTGATC
GTACCAAAGTAACTTTGCCGGAAAGACGAACGAAGGCTGGATTTGACCCAAATGCATACAAACTCCTAGAAAAGGCAGGATACGACTTTACAACTCATACTGAGTTTAAA
AGTCTAAAAATCTTTGATGGGAGATCTGAGCTTTCTCCGACACAGAAGAAGCTCCAAAAAGAAGGTTATGTCATACCATCCTCGAGAGCCGGACTAGGGTACAATCCCCC
AAAGCCAGTTCGTATAACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCT
CTGTCTTCGATCGCATTAAAGCGCCAACTACTCATCTTTCAGTTCATCAGTGGCTGAAATATTCATCTTTGGAAAAGGAAGGTCAGAGCAAAACTTCTGCTCCTGCCCGA
CGTTCAGTGTTTCATCGTTTGAGTGTGTCTACATCAAAGAAAGTAGATGAACCTTCGAGATCCGTGTTCGACCGCCTTCAAGCAACATATGGCCAATGCAAGGGAAAGTT
GAAAAGTCTTGAAACAGAAGAATCCGACGAGATGAATGACAACAACGAATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAG
TGAATTATGATGAGAAACAAGTCTGA
Protein sequenceShow/hide protein sequence
MVGSLSRRTGHSHPYKSKDNPSSTGVHNPLRIQTKLPSSVLCKLIAYDTPTCMSTTWTLWINTSVPNTKRVVSHSVTRISRSKETQHEDSQTPVIANKMLRRMTESAQLE
IATAEDLMLGKFISSSQQPNETSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKIVEEKDQEIASLRNQMESRDVAESKSARDIFQDQLESVENEDEGWNLVTRRKKQKK
HSVQREPHMFRNYRRKNMSQKQKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHVVNTLEEGDSSSSPSQNAKKESIEEVDACEVQSKEA
SAHPAKSKAPKEEASSNAPILRYVPLSRHKKGESPFTECSEILKVGDVEILKENFTTPLTAITKQEIQESKTDRTKVTLPERRTKAGFDPNAYKLLEKAGYDFTTHTEFK
SLKIFDGRSELSPTQKKLQKEGYVIPSSRAGLGYNPPKPVRITRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTHLSVHQWLKYSSLEKEGQSKTSAPAR
RSVFHRLSVSTSKKVDEPSRSVFDRLQATYGQCKGKLKSLETEESDEMNDNNEFSSTVPSRMKRKPFVLINTEVNYDEKQV