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Spg034589 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034589
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold4:13537879..13539735
RNA-Seq ExpressionSpg034589
SyntenySpg034589
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACU13404.1 unknown [Glycine max]6.4e-0840.62Show/hide
Query:  SNPKARNMEMV-VMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL
        S  K  NM +V +M+G   IN   ++ + L++ R+ DG+LLIK IL L L E+L E+RV++++ RH + L LF+L  N +     WDP E  L  L
Subjt:  SNPKARNMEMV-VMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL

ACU16104.1 unknown [Glycine max]4.9e-0840.7Show/hide
Query:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL
        +VVM+G   IN   ++ + L++ R+ DG+LL+K IL L L ++L E+RV++++ RH++ L LF L  N D     WDP E  L  L
Subjt:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL

KAF7146875.1 hypothetical protein RHSIM_Rhsim03G0213600 [Rhododendron simsii]2.2e-0844.19Show/hide
Query:  SNPKARNMEMVVMEGD--FSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTL
        SN +A+ + +VV+ G    S+NH LD+ +LLDV RN +G+L+IKPIL L  L+QL+++ V++++DR    L L  L P+ + QT L
Subjt:  SNPKARNMEMVVMEGD--FSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTL

KAG4950871.1 hypothetical protein JHK85_044738 [Glycine max]6.4e-0840.62Show/hide
Query:  SNPKARNMEMV-VMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL
        S  K  NM +V +M+G   IN   ++ + L++ R+ DG+LLIK IL L L E+L E+RV++++ RH + L LF+L  N +     WDP E  L  L
Subjt:  SNPKARNMEMV-VMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL

PON81205.1 hypothetical protein TorRG33x02_229450 [Trema orientale]6.4e-0841.77Show/hide
Query:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPF
        M++++    IN  L+  +L+ V RN D +LLI+ +L L  LE+L E+RV+++ +R+N+ L LF  + N  GQT LWD F
Subjt:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPF

TrEMBL top hitse value%identityAlignment
A0A0S3REA9 Uncharacterized protein5.8e-0739.76Show/hide
Query:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPL
        +VV+E    ++  LD  ++LDV R+ DG+ L++P+ V   L+QL EQ V+ +HDR NK L L  L P    QT  W+  +  L
Subjt:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPL

A0A2P5DFD0 Uncharacterized protein9.0e-0840.51Show/hide
Query:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPF
        +++++    IN  L+  +L+ V RN D +LLI+ +L L  LE+L E+RV+++ +R+N+ L LF  + N  GQT LWD F
Subjt:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPF

A0A2P5E6Q8 Uncharacterized protein3.1e-0841.77Show/hide
Query:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPF
        M++++    IN  L+  +L+ V RN D +LLI+ +L L  LE+L E+RV+++ +R+N+ L LF  + N  GQT LWD F
Subjt:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPF

C6SVY1 Uncharacterized protein3.1e-0840.62Show/hide
Query:  SNPKARNMEMV-VMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL
        S  K  NM +V +M+G   IN   ++ + L++ R+ DG+LLIK IL L L E+L E+RV++++ RH + L LF+L  N +     WDP E  L  L
Subjt:  SNPKARNMEMV-VMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL

C6T366 Uncharacterized protein2.4e-0840.7Show/hide
Query:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL
        +VVM+G   IN   ++ + L++ R+ DG+LL+K IL L L ++L E+RV++++ RH++ L LF L  N D     WDP E  L  L
Subjt:  MVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLMPNFDGQTTLWDPFETPLASL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCGTGTGGGCAGAGGTTCATAGGCGTCCTAGGAAGACGAGCACGCTGGGTGGGTGAGCACTGCGCGAGGCTTGCTACAATCACTGTGTGCAGAGCAAGATCAAA
CCCTAAAGCAAGGAACATGGAGATGGTGGTGATGGAAGGAGATTTCTCGATCAATCATGGCTTGGACATACCTAAATTGCTCGACGTGACAAGGAATAGTGATGGTTCCC
TTTTGATCAAACCCATACTCGTCCTCAGCCTCCTTGAGCAGCTGGATGAACAAAGGGTGATTGAAATACATGACAGGCACAACAAATCTCTGTTTCTCTTCACTCTCATG
CCCAACTTTGATGGCCAAACAACCCTTTGGGACCCCTTTGAAACTCCCTTGGCTTCTCTCGCCACTCCCCATTTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCATGCGTGTGGGCAGAGGTTCATAGGCGTCCTAGGAAGACGAGCACGCTGGGTGGGTGAGCACTGCGCGAGGCTTGCTACAATCACTGTGTGCAGAGCAAGATCAAA
CCCTAAAGCAAGGAACATGGAGATGGTGGTGATGGAAGGAGATTTCTCGATCAATCATGGCTTGGACATACCTAAATTGCTCGACGTGACAAGGAATAGTGATGGTTCCC
TTTTGATCAAACCCATACTCGTCCTCAGCCTCCTTGAGCAGCTGGATGAACAAAGGGTGATTGAAATACATGACAGGCACAACAAATCTCTGTTTCTCTTCACTCTCATG
CCCAACTTTGATGGCCAAACAACCCTTTGGGACCCCTTTGAAACTCCCTTGGCTTCTCTCGCCACTCCCCATTTTGTTTAA
Protein sequenceShow/hide protein sequence
MHACGQRFIGVLGRRARWVGEHCARLATITVCRARSNPKARNMEMVVMEGDFSINHGLDIPKLLDVTRNSDGSLLIKPILVLSLLEQLDEQRVIEIHDRHNKSLFLFTLM
PNFDGQTTLWDPFETPLASLATPHFV