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Spg034604 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034604
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold4:14708233..14709613
RNA-Seq ExpressionSpg034604
SyntenySpg034604
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4128712.1 hypothetical protein ERO13_D09G037250v2 [Gossypium hirsutum]1.1e-0927.63Show/hide
Query:  ERGFS------CTLPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV
        E+GF         +P T+  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L DV + +   ++N ++ DFL  +
Subjt:  ERGFS------CTLPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV

Query:  LLTVARPGAKWDDHG-AARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSL
        L  V  PG++W      + + + + L   A  W ++++   MP +H +T+S+
Subjt:  LLTVARPGAKWDDHG-AARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-0932.24Show/hide
Query:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV
        E+GF     +TM         I+Q  W+  C +P      LV +FY        + V VRG  V++S   IN V+ L D +D     + N  + D +  V
Subjt:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV

Query:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
        L TVA  GA+W+    GA   +++ L    A  W H++K+ ++PTTH  T+S
Subjt:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.3e-1133.55Show/hide
Query:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV
        E+GF     +TM         I+Q  W+  C +P      LV +FY      E + V VRG  V++S   IN V+ L D +D     + N    D +  V
Subjt:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV

Query:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
        L TVA  GA+W+    GA   +++ L    A  W H++K+R++PTTH  T+S
Subjt:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]9.5e-1134.06Show/hide
Query:  PQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWD--
        P  + D I Q  W+  C +P      LV +FY      + D V +RG  V  S   IN ++ L D +D E +  +  +    L +VL TVA  GA+W+  
Subjt:  PQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWD--

Query:  DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
          GA   L++  L+  A  W H++K+R++PTTH  T+S
Subjt:  DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.8e-1836.23Show/hide
Query:  LPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWD-
        LP  +T  I +  W+T  + P    P +VHDFYR    E  D V  +G TV FS+  IN +Y++RD  DA GN +++   ++ +   L  +A+PG +W  
Subjt:  LPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWD-

Query:  DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
             RTL+++ L  +   W++ VK +++PTTHD T+S
Subjt:  DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.1e-1032.24Show/hide
Query:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV
        E+GF     +TM         I+Q  W+  C +P      LV +FY        + V VRG  V++S   IN V+ L D +D     + N  + D +  V
Subjt:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV

Query:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
        L TVA  GA+W+    GA   +++ L    A  W H++K+ ++PTTH  T+S
Subjt:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1133.55Show/hide
Query:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV
        E+GF     +TM         I+Q  W+  C +P      LV +FY      E + V VRG  V++S   IN V+ L D +D     + N    D +  V
Subjt:  ERGFSCTLPQTM------TDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVV

Query:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
        L TVA  GA+W+    GA   +++ L    A  W H++K+R++PTTH  T+S
Subjt:  LLTVARPGAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

A0A2P5DAQ2 Uncharacterized protein4.6e-1134.06Show/hide
Query:  PQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWD--
        P  + D I Q  W+  C +P      LV +FY      + D V +RG  V  S   IN ++ L D +D E +  +  +    L +VL TVA  GA+W+  
Subjt:  PQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWD--

Query:  DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS
          GA   L++  L+  A  W H++K+R++PTTH  T+S
Subjt:  DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLS

A0A5D2D4Q7 Uncharacterized protein1.9e-0928.78Show/hide
Query:  LPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWDD
        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  INN++ L DV + E   ++  ++ DFL  VL  V   G++W  
Subjt:  LPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWDD

Query:  HG-AARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSL
              + + + L   A  W+++V+   MP +H +T+S+
Subjt:  HG-AARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSL

A0A5J5SYF7 Uncharacterized protein9.6e-0928.07Show/hide
Query:  EKVGREKEKGGEHKGKYQEERGFS------CTLPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVL
        EKV    +   +H+     E+GF+        +P  +  +I+  KWE  C+        LV +FY +   ++  EV+VR   V  +S  IN+++ L DV 
Subjt:  EKVGREKEKGGEHKGKYQEERGFS------CTLPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVL

Query:  DAEGNALLNCLDDDFLNVVLLTVARPGAKWDDHG-AARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSL
        + E   ++N ++ DFL  VL  V  PG++W      + + + + L   A  W ++V    MP +H +T+S+
Subjt:  DAEGNALLNCLDDDFLNVVLLTVARPGAKWDDHG-AARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGACTCACAAAACCTCTCCGTCACCGGTTACGCTGACGATGCACCTCCATCTTCACCGGAGGTGGAAGGACCTCATAGGGATGTCATCATCTCCTCTGACGAAGA
TGATGACAACCAGCATAACAATGACCGCATGGAGGAAGACGAATCGGAAGTCATCGACGGAGAACAGCCCATCGACAACACAGAAACTCAGCCCGCCATCGCACCATCCA
CCACCAGCGCAAATGTCACTGAGGCGAAAAAGGCGACGCAATTCGCCAGAGAGAGGAGCAAGAAAAGGCTGCCGCAGAAGAAAACTGCGCGCAAGATTGCCGCAGATGAA
GAAGCGGCCAGAGAAAGAGATCACGCCAGCAAGCTGGCACAAGACCAAATAGTCGCAGAAGTCGCCGCAGCAAACCTAGCCATCATTGAAGTGGCTCTGGACTTTGAGTC
CACCGATTCGGAGGATGAGCTTCCCCTAACTCATCGACGCAACATCTTGTCCACTGGGGTAGTCATCCAAGAACCATCCGAAAGGCCTGCGGCGGCCCCAAGCAAGAAAA
GAAAAGCGCCCATCACATCCAAAGGAAAAGGCAAAGAAAAGGTGGGCAGAGAAAAAGAAAAAGGCGGCGAGCACAAGGGCAAGTACCAAGAAGAGAGGGGTTTCAGCTGC
ACCCTCCCGCAGACGATGACAGATCAGATTTCCCAACGCAAATGGGAAACGGTTTGCGAAAACCCTCGCACCTACGCCCCTGCGTTAGTCCACGACTTCTACAGAGCGCA
ATGGCAGGAAGAAGTCGACGAAGTTTTGGTGCGGGGCCACACAGTCGCCTTTTCCTCTGCGTACATCAACAACGTTTACGAGCTGCGAGACGTACTTGACGCAGAGGGGA
ATGCGCTACTCAACTGCCTCGACGACGATTTCCTGAACGTAGTGCTACTTACGGTGGCCAGACCTGGGGCCAAGTGGGACGACCATGGAGCTGCGAGGACCCTGAAAGCG
CAATTACTGGACTTTGAGGCTACTTGCTGGATGCACTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGACTCACAAAACCTCTCCGTCACCGGTTACGCTGACGATGCACCTCCATCTTCACCGGAGGTGGAAGGACCTCATAGGGATGTCATCATCTCCTCTGACGAAGA
TGATGACAACCAGCATAACAATGACCGCATGGAGGAAGACGAATCGGAAGTCATCGACGGAGAACAGCCCATCGACAACACAGAAACTCAGCCCGCCATCGCACCATCCA
CCACCAGCGCAAATGTCACTGAGGCGAAAAAGGCGACGCAATTCGCCAGAGAGAGGAGCAAGAAAAGGCTGCCGCAGAAGAAAACTGCGCGCAAGATTGCCGCAGATGAA
GAAGCGGCCAGAGAAAGAGATCACGCCAGCAAGCTGGCACAAGACCAAATAGTCGCAGAAGTCGCCGCAGCAAACCTAGCCATCATTGAAGTGGCTCTGGACTTTGAGTC
CACCGATTCGGAGGATGAGCTTCCCCTAACTCATCGACGCAACATCTTGTCCACTGGGGTAGTCATCCAAGAACCATCCGAAAGGCCTGCGGCGGCCCCAAGCAAGAAAA
GAAAAGCGCCCATCACATCCAAAGGAAAAGGCAAAGAAAAGGTGGGCAGAGAAAAAGAAAAAGGCGGCGAGCACAAGGGCAAGTACCAAGAAGAGAGGGGTTTCAGCTGC
ACCCTCCCGCAGACGATGACAGATCAGATTTCCCAACGCAAATGGGAAACGGTTTGCGAAAACCCTCGCACCTACGCCCCTGCGTTAGTCCACGACTTCTACAGAGCGCA
ATGGCAGGAAGAAGTCGACGAAGTTTTGGTGCGGGGCCACACAGTCGCCTTTTCCTCTGCGTACATCAACAACGTTTACGAGCTGCGAGACGTACTTGACGCAGAGGGGA
ATGCGCTACTCAACTGCCTCGACGACGATTTCCTGAACGTAGTGCTACTTACGGTGGCCAGACCTGGGGCCAAGTGGGACGACCATGGAGCTGCGAGGACCCTGAAAGCG
CAATTACTGGACTTTGAGGCTACTTGCTGGATGCACTGGGTGAAGAATCGCATCATGCCCACAACGCATGATGCCACATTGAGCCTTTAA
Protein sequenceShow/hide protein sequence
MSDSQNLSVTGYADDAPPSSPEVEGPHRDVIISSDEDDDNQHNNDRMEEDESEVIDGEQPIDNTETQPAIAPSTTSANVTEAKKATQFARERSKKRLPQKKTARKIAADE
EAARERDHASKLAQDQIVAEVAAANLAIIEVALDFESTDSEDELPLTHRRNILSTGVVIQEPSERPAAAPSKKRKAPITSKGKGKEKVGREKEKGGEHKGKYQEERGFSC
TLPQTMTDQISQRKWETVCENPRTYAPALVHDFYRAQWQEEVDEVLVRGHTVAFSSAYINNVYELRDVLDAEGNALLNCLDDDFLNVVLLTVARPGAKWDDHGAARTLKA
QLLDFEATCWMHWVKNRIMPTTHDATLSL