CuGenDBv2

Gene ID	Spg034609
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Vesicle transport protein SEC20
Genome location	scaffold4:14435504..14442963
RNA-Seq Expression	Spg034609
Synteny	Spg034609
Gene Ontology terms	GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process) GO:0016020 - membrane (cellular component) GO:0005484 - SNAP receptor activity (molecular function)
InterPro domains	IPR005606 - Sec20

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7025339.1 Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-75

70.75

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                       +ESTGVLKKAESEYKGHRSL+ RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQANQIPRD   GRNPVQAN+DLIH+VA+PQER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

XP_022157044.1 uncharacterized protein LOC111023863 [Momordica charantia]

1.9e-75

68.77

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERERLLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTA+TIETF                       +ESTGVLKKAE+EYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQA+ IPRDI HGRNP+Q N+DL++KV   QERH   E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

XP_022960516.1 uncharacterized protein LOC111461229 [Cucurbita moschata]

6.4e-76

71.15

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                       +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQANQIPRD   GRNPVQAN+DLIH+VA+PQER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

XP_023005057.1 uncharacterized protein LOC111498164 [Cucurbita maxima]

4.9e-76

71.54

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                        ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQAN IPRD   GRNPVQAN+DLIH+VADPQER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

XP_038875148.1 uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida]

7.6e-77

69.96

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+ +LDLL PQLLSDSEVEAAQSLL+SWKNQS+NLRSSLRNAN+QAKANMRKAAQEERERLLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTA+TIETF                       +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGM KQAN IP DI+HGRNPVQAN+DLIH++ADPQER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TE96 Putative vesicle transporter Sec20

1.6e-72

68.63

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSE+EAAQSLLESWKNQS NLRSSLRNAN+QAKANMRKAAQEERERLLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                       +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRD-IEHGRNPVQA-NDDLIHKVADPQERHCLKE
           RMAT AIKAGM KQANQIP D I HGRNPVQA  +DL+H++ D QER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRD-IEHGRNPVQA-NDDLIHKVADPQERHCLKE

A0A6J1DTI9 uncharacterized protein LOC111023863

9.0e-76

68.77

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSEVEAAQSL+ESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERERLLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTA+TIETF                       +ESTGVLKKAE+EYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQA+ IPRDI HGRNP+Q N+DL++KV   QERH   E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

A0A6J1H7T9 uncharacterized protein LOC111461229

3.1e-76

71.15

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                       +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQANQIPRD   GRNPVQAN+DLIH+VA+PQER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

A0A6J1KS49 uncharacterized protein LOC111498164

2.4e-76

71.54

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNAN+QAKANMRKAAQEERE+LLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                        ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE
           RMAT AIKAGMVKQAN IPRD   GRNPVQAN+DLIH+VADPQER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKE

E5GCN4 Vesicle transport protein SEC20

1.6e-72

68.63

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        L+  LDLL PQLLSDSE+EAAQSLLESWKNQS NLRSSLRNAN+QAKANMRKAAQEERERLLGGGEESTIRRRNLQTKA MTSAAESI ESLRRTRQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------
        QEVERTASTIETF                       +ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDVMD                          
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMD--------------------------

Query:  ---RMATPAIKAGMVKQANQIPRD-IEHGRNPVQA-NDDLIHKVADPQERHCLKE
           RMAT AIKAGM KQANQIP D I HGRNPVQA  +DL+H++ D QER    E
Subjt:  ---RMATPAIKAGMVKQANQIPRD-IEHGRNPVQA-NDDLIHKVADPQERHCLKE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G24315.1 Sec20 family protein

3.5e-48

64.2

Show/hide

Query:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV
        LQ +LDLL PQL SD +V++ QSLLE+WKNQ H+LR +LR+AN+QAK NMRKAAQEERE LLGGG EST+ RR  Q  A +TS AESI ESLRR+RQLMV
Subjt:  LQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLRSSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMV

Query:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMDRM
        QEVER+ +T+  F                        ESTGVLKKAESEYKGHRSLL RTRNLLSTMQRQDV+DR+
Subjt:  QEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKAESEYKGHRSLLMRTRNLLSTMQRQDVMDRM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTATGGATTTTACACTCCGGTGAATTTCGCGTCGGCGTCGAGACGCCAGGGCAGCGTCTTGACGCCATCCCTGATCCGTGCCTACTGTTTTATTTCTCGGTTTATTC
TCGTTTCATCTCGGTATGGGGCTTAATTCTTCGGCTCTTGGTGTCATACTTCAGGCCTGCTTCAATACAACTGGGTCTTTTCACCTCCTTGTCGTCCAAGACATCGAGAT
GGCTCCAAAACTCCCTCGATCTTCTTGTGCCCCAGTTGCTCTCTGATTCTGAAGTCGAGGCTGCTCAATCGTTGCTTGAATCCTGGAAAAACCAATCCCACAATTTGCGA
TCGAGTCTGAGAAATGCTAATGTGCAAGCAAAGGCCAACATGAGAAAAGCTGCTCAGGAGGAGAGAGAACGCCTTCTAGGTGGAGGAGAAGAGTCCACTATTCGAAGACG
AAATTTACAAACTAAGGCTAGAATGACATCTGCTGCAGAAAGCATCATAGAGAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTGGAAAGAACTGCAAGCACAA
TTGAGACTTTCGGTCACCTTGATCCTAAGAGCTGCAAAGGATTCCCCTTTCTTGTCTACCTACAGCTTGGACATTCTTGCAAGGAATCAACTGGAGTGTTAAAGAAGGCT
GAGAGTGAATATAAGGGGCATCGCTCATTGTTAATGCGAACCAGGAACTTACTTTCCACTATGCAACGGCAAGATGTAATGGACAGGATGGCCACCCCTGCCATCAAAGC
AGGGATGGTCAAACAAGCAAATCAAATTCCTAGAGATATTGAGCATGGTAGGAATCCAGTTCAAGCCAACGACGATTTAATTCACAAAGTTGCAGATCCACAGGAACGGC
ATTGCTTGAAGGAGAGCACTCCCACTTTAGGGGACAAGGCGGTTGTGGCCTCCAAAATGTTAACCTTAGAGATGATCGACTCTTCTTCGTTCATCAACATTGAGCTTCCA
AGTGCTTGGCAGAGGAGGATTCCAAGAGTCGTGACTCAAGTGTTTTTCGTCTCTGATGATATCGACTGGATTCCATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLWILHSGEFRVGVETPGQRLDAIPDPCLLFYFSVYSRFISVWGLILRLLVSYFRPASIQLGLFTSLSSKTSRWLQNSLDLLVPQLLSDSEVEAAQSLLESWKNQSHNLR
SSLRNANVQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKARMTSAAESIIESLRRTRQLMVQEVERTASTIETFGHLDPKSCKGFPFLVYLQLGHSCKESTGVLKKA
ESEYKGHRSLLMRTRNLLSTMQRQDVMDRMATPAIKAGMVKQANQIPRDIEHGRNPVQANDDLIHKVADPQERHCLKESTPTLGDKAVVASKMLTLEMIDSSSFINIELP
SAWQRRIPRVVTQVFFVSDDIDWIP

Spg034609 (gene) of Sponge gourd (cylindrica) v1 genome