; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034631 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034631
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold4:12412131..12413496
RNA-Seq ExpressionSpg034631
SyntenySpg034631
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]8.6e-2331.17Show/hide
Query:  FINNLARAKYIKMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQ--
        F++  A+  Y  +  R   FE GF        +L   +   +  H W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P AIN  F LQ  
Subjt:  FINNLARAKYIKMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQ--

Query:  ------------DFPHAGFNEMVVAP----SNDQLNATVREAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCW
                       + G  E +  P    +  QL     +   L      W  F+K +L+PT+H++TVS   +LL  +IL   +ID+GKII    + C 
Subjt:  ------------DFPHAGFNEMVVAP----SNDQLNATVREAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCW

Query:  RKKVGKLFFPNTITMLCQRAGVPESEDDVTL
        +++   L FPN IT LC++  V E   D  L
Subjt:  RKKVGKLFFPNTITMLCQRAGVPESEDDVTL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.4e-2836.69Show/hide
Query:  RFINNLARAKYIKMLK-RDFLFERGFGDD-------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNL
        +F    A  +Y   ++ R    E+GF  D       LP F+   I  H W QFC+ PE     +VREFYAN+ D       VRGV + WS  AIN++F L
Subjt:  RFINNLARAKYIKMLK-RDFLFERGFGDD-------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNL

Query:  QD--FPHAGFNEMV-----------VAPSNDQLNATVREA-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIY
         D    H+ F E +           VA +  + N + + A     + L   A  W  F+K  LLPTTH  TVS+D +LL  ++L   SI+VG++I SEI 
Subjt:  QD--FPHAGFNEMV-----------VAPSNDQLNATVREA-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIY

Query:  DCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGIIDTPNLARL
         C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  DCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGIIDTPNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.8e-2939.23Show/hide
Query:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNATVRE
        F+   I  H W QFC+ PE     +VREFYAN+ D E     VRGV + WS  AIN++F L D    H+ F + +           VA +  + N + + 
Subjt:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNATVRE

Query:  A-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGI
        A     + L   A  W  F+K RLLPTTH  TVS+D +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G 
Subjt:  A-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGI

Query:  IDTPNLARL
        ID   +AR+
Subjt:  IDTPNLARL

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]7.8e-2432.38Show/hide
Query:  KGIAEASAETGNLDAEEPRLPYNRFINN--LARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVR
        K +A  +++    D++E ++ +   I +  L   K   +   + + +       P F+   IA H    FC+ PE     +VREFYAN+ D E     V 
Subjt:  KGIAEASAETGNLDAEEPRLPYNRFINN--LARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVR

Query:  GVPLDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNATVREAAYLKSEANT-------------------WMGFIKLRLLPTTHDSTVSRDWVLLAFA
        GV +  S  AIN++F L D P    +E V A +  +L   ++  A  ++E+N                    W  F++ RLLPTTH   VS+  VLL ++
Subjt:  GVPLDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNATVREAAYLKSEANT-------------------WMGFIKLRLLPTTHDSTVSRDWVLLAFA

Query:  ILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVP
        IL   SI+VG+II  EIY    ++ G LFFP+++T LCQ A  P
Subjt:  ILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVP

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.5e-2430.28Show/hide
Query:  IAEASAETGNLDAEEPRLPYNRFINNLARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPL
        +A  +++    +++   + Y   I N   +     ++++F+++     + P F+   I  H W  FC+ PE     +VREFY N+ + +     +RGV +
Subjt:  IAEASAETGNLDAEEPRLPYNRFINNLARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPL

Query:  DWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNATV----------REAAY------LKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSM
          S  AIN++F+L D    H+ F E +  P    +  TV           + AY      L   A  W  F+K RLLPTTH  TVS++ V L +++L   
Subjt:  DWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNATV----------REAAY------LKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSM

Query:  SIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKG
        SI+VG++I  EI  C  +K G LFFP+ IT +C+    P   ++  L + G
Subjt:  SIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)6.6e-2936.69Show/hide
Query:  RFINNLARAKYIKMLK-RDFLFERGFGDD-------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNL
        +F    A  +Y   ++ R    E+GF  D       LP F+   I  H W QFC+ PE     +VREFYAN+ D       VRGV + WS  AIN++F L
Subjt:  RFINNLARAKYIKMLK-RDFLFERGFGDD-------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNL

Query:  QD--FPHAGFNEMV-----------VAPSNDQLNATVREA-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIY
         D    H+ F E +           VA +  + N + + A     + L   A  W  F+K  LLPTTH  TVS+D +LL  ++L   SI+VG++I SEI 
Subjt:  QD--FPHAGFNEMV-----------VAPSNDQLNATVREA-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIY

Query:  DCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGIIDTPNLARL
         C  +K G LFFP+ IT LC+ A  P   ++  L + G ID   +AR+
Subjt:  DCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGIIDTPNLARL

A0A2P5BCG4 Uncharacterized protein (Fragment)1.3e-2939.23Show/hide
Query:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNATVRE
        F+   I  H W QFC+ PE     +VREFYAN+ D E     VRGV + WS  AIN++F L D    H+ F + +           VA +  + N + + 
Subjt:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNATVRE

Query:  A-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGI
        A     + L   A  W  F+K RLLPTTH  TVS+D +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   ++  L + G 
Subjt:  A-----AYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKGI

Query:  IDTPNLARL
        ID   +AR+
Subjt:  IDTPNLARL

A0A2P5BCT7 Uncharacterized protein (Fragment)3.8e-2432.38Show/hide
Query:  KGIAEASAETGNLDAEEPRLPYNRFINN--LARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVR
        K +A  +++    D++E ++ +   I +  L   K   +   + + +       P F+   IA H    FC+ PE     +VREFYAN+ D E     V 
Subjt:  KGIAEASAETGNLDAEEPRLPYNRFINN--LARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVR

Query:  GVPLDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNATVREAAYLKSEANT-------------------WMGFIKLRLLPTTHDSTVSRDWVLLAFA
        GV +  S  AIN++F L D P    +E V A +  +L   ++  A  ++E+N                    W  F++ RLLPTTH   VS+  VLL ++
Subjt:  GVPLDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNATVREAAYLKSEANT-------------------WMGFIKLRLLPTTHDSTVSRDWVLLAFA

Query:  ILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVP
        IL   SI+VG+II  EIY    ++ G LFFP+++T LCQ A  P
Subjt:  ILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVP

A0A2P5DAQ2 Uncharacterized protein1.7e-2430.28Show/hide
Query:  IAEASAETGNLDAEEPRLPYNRFINNLARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPL
        +A  +++    +++   + Y   I N   +     ++++F+++     + P F+   I  H W  FC+ PE     +VREFY N+ + +     +RGV +
Subjt:  IAEASAETGNLDAEEPRLPYNRFINNLARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPL

Query:  DWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNATV----------REAAY------LKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSM
          S  AIN++F+L D    H+ F E +  P    +  TV           + AY      L   A  W  F+K RLLPTTH  TVS++ V L +++L   
Subjt:  DWSPGAINSLFNLQD--FPHAGFNEMVVAPSNDQLNATV----------REAAY------LKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSM

Query:  SIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKG
        SI+VG++I  EI  C  +K G LFFP+ IT +C+    P   ++  L + G
Subjt:  SIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRAGVPESEDDVTLMDKG

A0A6A2ZUE4 Uncharacterized protein4.2e-2331.17Show/hide
Query:  FINNLARAKYIKMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQ--
        F++  A+  Y  +  R   FE GF        +L   +   +  H W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P AIN  F LQ  
Subjt:  FINNLARAKYIKMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPLDWSPGAINSLFNLQ--

Query:  ------------DFPHAGFNEMVVAP----SNDQLNATVREAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCW
                       + G  E +  P    +  QL     +   L      W  F+K +L+PT+H++TVS   +LL  +IL   +ID+GKII    + C 
Subjt:  ------------DFPHAGFNEMVVAP----SNDQLNATVREAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCW

Query:  RKKVGKLFFPNTITMLCQRAGVPESEDDVTL
        +++   L FPN IT LC++  V E   D  L
Subjt:  RKKVGKLFFPNTITMLCQRAGVPESEDDVTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGACGAGAGCAAGAAAAGAGCGAGACAATGAGGAAGAGGAGGTACCTGTTACCCCCGAAGTACCGAAAACAAAGGTAAAGAAAAAGAAAACACCAGAAGAGAA
AGAAGCTAAGAGGAGAAGAAGACAGCAACGAACTGAGGATCAGAAAGTCGTACAGAAGATAGTGGAAGATATTGCCACTGAGGTGATTAAAGAAGGAAATGTAAAGGAAC
CTGCAGGCCAGAACCCTGAGCATACTAACCCGATAGTTGAGGATACGCAAGAAGTTCAAGAAAAACAGACAGAGGATGTGCCGGAAAAAGGCAATGAGCAGGTGGAACAA
GAGCAGGAGGCTCGAGTAGAGGTTATCATGCCGGAGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGGCCGAGACTGGAAATCTTGATGCTGAGGAGCCAAGATTGCC
GTACAACCGCTTCATCAATAATCTTGCTAGGGCAAAATACATAAAAATGCTGAAACGAGACTTTCTGTTCGAACGAGGTTTTGGCGATGATCTGCCACGGTTCTTGAGGA
CTGGAATAGCGAACCATGGCTGGAGTCAGTTCTGTTCGAAGCCGGAGCCAGTCAATTCCAACATTGTTCGAGAGTTTTATGCCAATATTGACGATCAAGAGGGATTTCAA
GCTATCGTTCGAGGAGTACCCCTTGACTGGAGCCCAGGAGCTATCAACTCTTTATTCAATCTCCAGGACTTTCCGCACGCAGGCTTCAATGAGATGGTGGTGGCACCATC
GAACGATCAATTAAATGCGACTGTCCGAGAGGCTGCTTATCTAAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTACTGCCAACGACTCACGACTCAA
CGGTGTCTCGCGACTGGGTACTGCTTGCCTTTGCTATTCTTCGCTCGATGAGCATTGATGTGGGAAAAATAATTTCTTCTGAGATTTATGATTGCTGGCGGAAAAAGGTT
GGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCAAAGGGCAGGGGTTCCAGAGAGTGAAGATGATGTGACTTTAATGGACAAGGGAATAATCGACACGCCAAA
CCTTGCTAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGACGAGAGCAAGAAAAGAGCGAGACAATGAGGAAGAGGAGGTACCTGTTACCCCCGAAGTACCGAAAACAAAGGTAAAGAAAAAGAAAACACCAGAAGAGAA
AGAAGCTAAGAGGAGAAGAAGACAGCAACGAACTGAGGATCAGAAAGTCGTACAGAAGATAGTGGAAGATATTGCCACTGAGGTGATTAAAGAAGGAAATGTAAAGGAAC
CTGCAGGCCAGAACCCTGAGCATACTAACCCGATAGTTGAGGATACGCAAGAAGTTCAAGAAAAACAGACAGAGGATGTGCCGGAAAAAGGCAATGAGCAGGTGGAACAA
GAGCAGGAGGCTCGAGTAGAGGTTATCATGCCGGAGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGGCCGAGACTGGAAATCTTGATGCTGAGGAGCCAAGATTGCC
GTACAACCGCTTCATCAATAATCTTGCTAGGGCAAAATACATAAAAATGCTGAAACGAGACTTTCTGTTCGAACGAGGTTTTGGCGATGATCTGCCACGGTTCTTGAGGA
CTGGAATAGCGAACCATGGCTGGAGTCAGTTCTGTTCGAAGCCGGAGCCAGTCAATTCCAACATTGTTCGAGAGTTTTATGCCAATATTGACGATCAAGAGGGATTTCAA
GCTATCGTTCGAGGAGTACCCCTTGACTGGAGCCCAGGAGCTATCAACTCTTTATTCAATCTCCAGGACTTTCCGCACGCAGGCTTCAATGAGATGGTGGTGGCACCATC
GAACGATCAATTAAATGCGACTGTCCGAGAGGCTGCTTATCTAAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCTGCGCTTACTGCCAACGACTCACGACTCAA
CGGTGTCTCGCGACTGGGTACTGCTTGCCTTTGCTATTCTTCGCTCGATGAGCATTGATGTGGGAAAAATAATTTCTTCTGAGATTTATGATTGCTGGCGGAAAAAGGTT
GGGAAGCTGTTTTTCCCCAACACTATCACGATGCTATGCCAAAGGGCAGGGGTTCCAGAGAGTGAAGATGATGTGACTTTAATGGACAAGGGAATAATCGACACGCCAAA
CCTTGCTAGGCTTTAG
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPEVPKTKVKKKKTPEEKEAKRRRRQQRTEDQKVVQKIVEDIATEVIKEGNVKEPAGQNPEHTNPIVEDTQEVQEKQTEDVPEKGNEQVEQ
EQEARVEVIMPEEDKGKGIAEASAETGNLDAEEPRLPYNRFINNLARAKYIKMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQ
AIVRGVPLDWSPGAINSLFNLQDFPHAGFNEMVVAPSNDQLNATVREAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDWVLLAFAILRSMSIDVGKIISSEIYDCWRKKV
GKLFFPNTITMLCQRAGVPESEDDVTLMDKGIIDTPNLARL