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Spg034663 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034663
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold7:46476976..46478938
RNA-Seq ExpressionSpg034663
SyntenySpg034663
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]8.6e-0458.82Show/hide
Query:  IGWESRFHSFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS
        I + + F +  PR NR S QT +L KTVEIELPVPDTLPTS + S S+SS+
Subjt:  IGWESRFHSFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS

TrEMBL top hitse value%identityAlignment
A0A5A7UAH6 CCHC-type domain-containing protein7.1e-0465.12Show/hide
Query:  SFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS
        S  PR NR +L T +L KTVEIELPVPDTLPTS + S+S+SS+
Subjt:  SFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS

A0A5A7V2F2 Uncharacterized protein9.2e-0467.5Show/hide
Query:  PRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS
        PR NR SLQ  +L KTVEIELP+PDTLPTS++ S+S+SS+
Subjt:  PRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS

A0A5D3BET3 Uncharacterized protein4.1e-0458.82Show/hide
Query:  IGWESRFHSFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS
        I + + F +  PR NR S QT +L KTVEIELPVPDTLPTS + S S+SS+
Subjt:  IGWESRFHSFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSRSSSSS

A0A5D3CAC6 Uncharacterized protein7.1e-0438.61Show/hide
Query:  HLRERVKEEEEEDFRGFEVEEDRKSSCKASHSRIWDQPVNLWRKIKGSREPRICVVCVRGNSGRIGWE-----SRFHSFRPRENRSSLQTRELAKTVEIE
        H  ERVKEEEEE FRG  +++  KSSCKA+H RIW    +   +        + ++ V+ ++ ++ W+     S      PR NRSSLQT +L K +EI 
Subjt:  HLRERVKEEEEEDFRGFEVEEDRKSSCKASHSRIWDQPVNLWRKIKGSREPRICVVCVRGNSGRIGWE-----SRFHSFRPRENRSSLQTRELAKTVEIE

Query:  L
        +
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTGAGGGAGAGAGTGAAGGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGATCA
ACCTGTCAACCTCTGGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCAATTCTGGACGAATTGGTTGGGAATCTCGTTTTCATTCCT
TCAGGCCAAGAGAAAATAGGTCGAGTCTACAGACCAGGGAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACGAAAGGTTCCAGA
TCAAGCTCCAGTTCTACGTTTCAGGAAGGTCAACGG
mRNA sequenceShow/hide mRNA sequence
CACTTGAGGGAGAGAGTGAAGGAGGAAGAAGAAGAAGATTTTCGTGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGATCA
ACCTGTCAACCTCTGGAGAAAGATAAAGGGTAGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGGGGCAATTCTGGACGAATTGGTTGGGAATCTCGTTTTCATTCCT
TCAGGCCAAGAGAAAATAGGTCGAGTCTACAGACCAGGGAACTAGCTAAGACTGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTACGAAAGGTTCCAGA
TCAAGCTCCAGTTCTACGTTTCAGGAAGGTCAACGG
Protein sequenceShow/hide protein sequence
HLRERVKEEEEEDFRGFEVEEDRKSSCKASHSRIWDQPVNLWRKIKGSREPRICVVCVRGNSGRIGWESRFHSFRPRENRSSLQTRELAKTVEIELPVPDTLPTSTKGSR
SSSSSTFQEGQR