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Spg034703 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034703
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnucleolar protein 58-like
Genome locationscaffold7:44373054..44375558
RNA-Seq ExpressionSpg034703
SyntenySpg034703
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]2.2e-0540.96Show/hide
Query:  TGLIGVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVATSPKDVILLDKRIINTPNFPRLQ
        T +  V++DR +L++AI+   SIDVGK+IS+ I +  R K   + FP+ IT LC+RAGV  S K+ +   K  I      RL+
Subjt:  TGLIGVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVATSPKDVILLDKRIINTPNFPRLQ

MBA0756372.1 hypothetical protein [Gossypium gossypioides]1.7e-0550Show/hide
Query:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGV
        +S  R+LL++ I+   SI+VGKII  +IY+C RKK G ++FP+ +T LC RA V
Subjt:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGV

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.2e-0532.39Show/hide
Query:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVLTGLI-----------------------------GVSRDRVLLVF
        VRGV V WS+ AIN++F L D    H+ F E +           VA +  + N    G                                VS+DR+LL+ 
Subjt:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVLTGLI-----------------------------GVSRDRVLLVF

Query:  AILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA
        ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A
Subjt:  AILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.3e-0532.17Show/hide
Query:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMVVAPS-----------------------------------------NDQLNAVLTGLIGVSRDRVLLV
        VRGV V WS+ AIN++F L D    H+ F E +  P                                            +L     G I VS+DR+LL+
Subjt:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMVVAPS-----------------------------------------NDQLNAVLTGLIGVSRDRVLLV

Query:  FAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA
         ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A
Subjt:  FAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]1.5e-0653.57Show/hide
Query:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVAT
        +S +R+LL++AIL   SI+VGKII  EI+NC +KK G ++FP+ IT LC +A V T
Subjt:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVAT

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein1.1e-0540.96Show/hide
Query:  TGLIGVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVATSPKDVILLDKRIINTPNFPRLQ
        T +  V++DR +L++AI+   SIDVGK+IS+ I +  R K   + FP+ IT LC+RAGV  S K+ +   K  I      RL+
Subjt:  TGLIGVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVATSPKDVILLDKRIINTPNFPRLQ

A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-0532.39Show/hide
Query:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVLTGLI-----------------------------GVSRDRVLLVF
        VRGV V WS+ AIN++F L D    H+ F E +           VA +  + N    G                                VS+DR+LL+ 
Subjt:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVLTGLI-----------------------------GVSRDRVLLVF

Query:  AILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA
        ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A
Subjt:  AILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA

A0A2P5DXM3 Uncharacterized protein6.2e-0632.17Show/hide
Query:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMVVAPS-----------------------------------------NDQLNAVLTGLIGVSRDRVLLV
        VRGV V WS+ AIN++F L D    H+ F E +  P                                            +L     G I VS+DR+LL+
Subjt:  VRGVAVDWSQGAINSLFNLQD--FPHAGFNEMVVAPS-----------------------------------------NDQLNAVLTGLIGVSRDRVLLV

Query:  FAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA
         ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A
Subjt:  FAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRA

A0A5D2MA47 Uncharacterized protein7.3e-0753.57Show/hide
Query:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVAT
        +S +R+LL++AIL   SI+VGKII  EI+NC +KK G ++FP+ IT LC +A V T
Subjt:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVAT

A0A7J9D6N4 Uncharacterized protein8.1e-0650Show/hide
Query:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGV
        +S  R+LL++ I+   SI+VGKII  +IY+C RKK G ++FP+ +T LC RA V
Subjt:  VSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGAGGGGTAGCTGTCGATTGGAGCCAAGGAGCGATAAATTCTCTCTTCAACCTTCAAGATTTTCCACATGCCGGATTTAATGAGATGGTGGTGGCACCATCTAA
TGATCAATTGAACGCGGTATTGACGGGTCTCATTGGAGTATCCCGAGATAGAGTGCTCCTGGTTTTTGCCATTTTGCGATCCTTGAGTATAGATGTTGGTAAGATTATTT
CCAATGAAATCTACAATTGCTGGCGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGCTGTGCAGCAGGGCAGGAGTGGCCACGAGTCCAAAGGATGTT
ATTCTACTTGATAAGAGGATTATAAACACGCCCAATTTCCCTCGACTTCAGCGCACACAGGAGGCACGCCAAGCAACAGTGCTTTGTTTTGCAGAATGCTCAGAATATAA
TGCTGAGCGATTTGAGGGAGCAAAATCTGTGATCCAGCAAAGTAGGGAGAAAAATTGCCACGTGCGTCGCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGAGGGGTAGCTGTCGATTGGAGCCAAGGAGCGATAAATTCTCTCTTCAACCTTCAAGATTTTCCACATGCCGGATTTAATGAGATGGTGGTGGCACCATCTAA
TGATCAATTGAACGCGGTATTGACGGGTCTCATTGGAGTATCCCGAGATAGAGTGCTCCTGGTTTTTGCCATTTTGCGATCCTTGAGTATAGATGTTGGTAAGATTATTT
CCAATGAAATCTACAATTGCTGGCGTAAGAAGGTGGGAAAGTTGTTCTTCCCAAACACAATTACCATGCTGTGCAGCAGGGCAGGAGTGGCCACGAGTCCAAAGGATGTT
ATTCTACTTGATAAGAGGATTATAAACACGCCCAATTTCCCTCGACTTCAGCGCACACAGGAGGCACGCCAAGCAACAGTGCTTTGTTTTGCAGAATGCTCAGAATATAA
TGCTGAGCGATTTGAGGGAGCAAAATCTGTGATCCAGCAAAGTAGGGAGAAAAATTGCCACGTGCGTCGCACGTGA
Protein sequenceShow/hide protein sequence
MVRGVAVDWSQGAINSLFNLQDFPHAGFNEMVVAPSNDQLNAVLTGLIGVSRDRVLLVFAILRSLSIDVGKIISNEIYNCWRKKVGKLFFPNTITMLCSRAGVATSPKDV
ILLDKRIINTPNFPRLQRTQEARQATVLCFAECSEYNAERFEGAKSVIQQSREKNCHVRRT