; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034705 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034705
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold7:46207498..46212746
RNA-Seq ExpressionSpg034705
SyntenySpg034705
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]2.4e-2951.37Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D+NHITV+EVD  +E E   QRTS F RI P VAR  VF+RLS+ E E++  Q T++  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        +RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

KAA0042067.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.4e-2951.32Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+++P +RKGLGYKSP+P+RI R+GK KV D NHITV+EVD  KEKE   QRTS F RI P VAR  VF+RLS+ E E++  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTRPSVFQR
        +RL+M   +E         TRPSAF+RL++   K   T       RP +F R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTRPSVFQR

KAA0042067.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.4e-0538.89Show/hide
Query:  FGTLDPVVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFP
        FGT +PVVV+  +E   + S+ K  SIE+++EGW +V R KK+K +  +KESR YR+ +R  K++K K K+K+++ K   E      C     T  E  P
Subjt:  FGTLDPVVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFP

Query:  RRFLDDSE
         R L++ E
Subjt:  RRFLDDSE

KAA0042067.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.9e-2953.02Show/hide
Query:  DLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVN
        +  S  I D   L   +  KKLL+EG+S+P +RKGLGYKSP+P+RI ++GK KV D NHIT+EE D++  KE  +QR SVF RIRP VAR +VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVN

Query:  ETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNV
        E E+E  Q   S  R SVFRRL+    +E ST      TRPSAF+RL V
Subjt:  ETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNV

KAA0055957.1 uncharacterized protein E6C27_scaffold319G00830 [Cucumis melo var. makuwa]1.8e-2950.68Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D NHITV+EVD  +EKE  +QRTS F RI P VAR  VF+RLS+ E +++  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        +RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

TYK28162.1 uncharacterized protein E5676_scaffold289G00760 [Cucumis melo var. makuwa]2.4e-2947.27Show/hide
Query:  DLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVN
        D  S  I +   L   +  KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VAR  VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVN

Query:  ETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        E E++  Q T++  + S F+RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  ETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]2.7e-1737.97Show/hide
Query:  FGTLDPVVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFP
        FGT +P+VV+  +E + +  QG+   IE+++EGW +V   KK++    ++ESR Y++ +R  K+QK K K+K+ + K    E  +F  P + +TLA++ P
Subjt:  FGTLDPVVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFP

Query:  RRFLDDSEGETLETVMCHIVDVVEDDNALASSSGVVADSGDLSSFSIKDLLSLPQEAK
        + FL D + E  E V CH ++  E++     S      S DLS F+++DLLSLPQE K
Subjt:  RRFLDDSEGETLETVMCHIVDVVEDDNALASSSGVVADSGDLSSFSIKDLLSLPQEAK

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]6.8e-0838.02Show/hide
Query:  AVASRISKLIEESSKDRVAVKDNPLFESVIPTSKQSKDTLNPDVMSVMMADIDQDERMAEMERKLNLLMKAFGTLDPVVV----RCQREATMKGSQGKCD
        A+A  I K + ES K  + +K+NPL+      S +S    +PDVMSVMMAD+  +  MAEMERK+NLLMK     D  +     + Q   T + SQ    
Subjt:  AVASRISKLIEESSKDRVAVKDNPLFESVIPTSKQSKDTLNPDVMSVMMADIDQDERMAEMERKLNLLMKAFGTLDPVVV----RCQREATMKGSQGKCD

Query:  SIEDENEGWTLVVRHKKQKQS
         ++D  +G  +V  ++ Q+QS
Subjt:  SIEDENEGWTLVVRHKKQKQS

TrEMBL top hitse value%identityAlignment
A0A5A7TJZ7 Retrotransposon gag protein1.2e-2951.32Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+++P +RKGLGYKSP+P+RI R+GK KV D NHITV+EVD  KEKE   QRTS F RI P VAR  VF+RLS+ E E++  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTRPSVFQR
        +RL+M   +E         TRPSAF+RL++   K   T       RP +F R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTRPSVFQR

A0A5A7TJZ7 Retrotransposon gag protein1.2e-0538.89Show/hide
Query:  FGTLDPVVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFP
        FGT +PVVV+  +E   + S+ K  SIE+++EGW +V R KK+K +  +KESR YR+ +R  K++K K K+K+++ K   E      C     T  E  P
Subjt:  FGTLDPVVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFP

Query:  RRFLDDSE
         R L++ E
Subjt:  RRFLDDSE

A0A5A7TJZ7 Retrotransposon gag protein1.2e-2947.27Show/hide
Query:  DLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVN
        D  S  I +   L   +  KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D+NHITV+EVD  +EKE  +QRTS F RI P VAR  VF+RLS+ 
Subjt:  DLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVN

Query:  ETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        E E++  Q T++  + S F+RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  ETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

A0A5A7UD46 Uncharacterized protein5.7e-2949.32Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D+NHIT++E D  +EKE   QRTS F RI P VAR  VF++LS+ E E++  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        +RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

A0A5A7UMY2 Reverse transcriptase domain-containing protein8.9e-3050.68Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D NHITV+EVD  +EKE  +QRTS F RI P VAR  VF+RLS+ E +++  Q T++  R S F
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        +RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

A0A5D3BSG5 Uncharacterized protein1.2e-2951.37Show/hide
Query:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF
        KKLL+EG+ +P +RKGLGYKSP+P+RI R+GK KV D+NHITV+EVD  +E E   QRTS F RI P VAR  VF+RLS+ E E++  Q T++  R SVF
Subjt:  KKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARVLVFQRLSVNETEKESTQPTNSSTRPSVF

Query:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR
        +RL++   EE     T   T+PSAF+RL++   K   T   P + R
Subjt:  RRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAGCAGGTTGTTGATCGATCCTTCTGGATCATTGGAGACTTGGGCCTGGGCTTCTTGGATAGGAATTGAGATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAG
CAGGATCTCAAAGTTGATCGAGGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCGCTATTCGAATCTGTCATTCCAACATCTAAGCAGTCAAAGGATACACTAA
ATCCTGATGTGATGTCCGTCATGATGGCTGATATAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTTAACCTCTTAATGAAGGCATTCGGGACCCTTGATCCC
GTAGTGGTTCGATGCCAAAGAGAAGCCACAATGAAGGGATCCCAAGGAAAATGTGATTCCATTGAAGATGAAAATGAAGGTTGGACCCTTGTCGTGCGCCACAAAAAGCA
AAAACAAAGTTACGCACGGAAAGAGTCCCGCCTATATCGAGACAGTAAAAGAAAGGCCAAGTCTCAAAAGAAGAAAGGAAAAAGGAAGTCAAGGAGGTCAAAGCCTGCCG
TGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTGAAGGGGAGACACTTGAAACTGTCATG
TGTCACATTGTGGATGTGGTGGAAGATGATAACGCCCTCGCTAGCTCCTCAGGAGTGGTGGCAGATTCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTATTGTCACT
TCCTCAGGAAGCTAAAAACAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACAAGAAAAGGGCTTGGGTATAAGTCGCCAGATCCGGTTCGCATAATAAGAAGAG
GGAAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCG
CCAGTTGCTCGTGTTTTAGTCTTTCAGAGATTAAGTGTCAATGAGACGGAAAAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAG
TATGCCCATTGGGGAAGAGGGTAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGGTTAAATGTGCCCGTTGGGAAAGAAGAGAGTACATTTTCAA
CTCCGGATGTGACTCGGCCATCAGTTTTTCAGAGATGCGATGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAGCAGGTTGTTGATCGATCCTTCTGGATCATTGGAGACTTGGGCCTGGGCTTCTTGGATAGGAATTGAGATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAG
CAGGATCTCAAAGTTGATCGAGGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCGCTATTCGAATCTGTCATTCCAACATCTAAGCAGTCAAAGGATACACTAA
ATCCTGATGTGATGTCCGTCATGATGGCTGATATAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTTAACCTCTTAATGAAGGCATTCGGGACCCTTGATCCC
GTAGTGGTTCGATGCCAAAGAGAAGCCACAATGAAGGGATCCCAAGGAAAATGTGATTCCATTGAAGATGAAAATGAAGGTTGGACCCTTGTCGTGCGCCACAAAAAGCA
AAAACAAAGTTACGCACGGAAAGAGTCCCGCCTATATCGAGACAGTAAAAGAAAGGCCAAGTCTCAAAAGAAGAAAGGAAAAAGGAAGTCAAGGAGGTCAAAGCCTGCCG
TGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCAGAATACTTCCCAAGGCGCTTTCTCGATGATAGTGAAGGGGAGACACTTGAAACTGTCATG
TGTCACATTGTGGATGTGGTGGAAGATGATAACGCCCTCGCTAGCTCCTCAGGAGTGGTGGCAGATTCAGGAGACTTATCCTCCTTCAGCATAAAGGACTTATTGTCACT
TCCTCAGGAAGCTAAAAACAAGAAGCTTCTAAAGGAAGGTTATAGTCTGCCAACAACAAGAAAAGGGCTTGGGTATAAGTCGCCAGATCCGGTTCGCATAATAAGAAGAG
GGAAGGCGAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTTGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAGGCGCATCAGGCCG
CCAGTTGCTCGTGTTTTAGTCTTTCAGAGATTAAGTGTCAATGAGACGGAAAAAGAAAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTTTTCGAAGGTTAAG
TATGCCCATTGGGGAAGAGGGTAGTACATTTTCAACTCCGAATGTCACTCGACCTTCAGCTTTTCAAAGGTTAAATGTGCCCGTTGGGAAAGAAGAGAGTACATTTTCAA
CTCCGGATGTGACTCGGCCATCAGTTTTTCAGAGATGCGATGAAAAGTGA
Protein sequenceShow/hide protein sequence
MISRLLIDPSGSLETWAWASWIGIEIREDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVIPTSKQSKDTLNPDVMSVMMADIDQDERMAEMERKLNLLMKAFGTLDP
VVVRCQREATMKGSQGKCDSIEDENEGWTLVVRHKKQKQSYARKESRLYRDSKRKAKSQKKKGKRKSRRSKPAVEESEDFFCPPQPITLAEYFPRRFLDDSEGETLETVM
CHIVDVVEDDNALASSSGVVADSGDLSSFSIKDLLSLPQEAKNKKLLKEGYSLPTTRKGLGYKSPDPVRIIRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRP
PVARVLVFQRLSVNETEKESTQPTNSSTRPSVFRRLSMPIGEEGSTFSTPNVTRPSAFQRLNVPVGKEESTFSTPDVTRPSVFQRCDEK