| GenBank top hits | e value | %identity | Alignment |
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| KAA0032751.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.9e-33 | 30.85 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
SQEK IE+++EGWT+V RKK+K + +KESR +R+ + +Q K KKKTR+ K V EE +DF +TLA++FP FL D Q E V C
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
Query: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDA-------------------------------------------------------
++ +++ +P E DLS F++ LLSLPQE K++LI+A
Subjt: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDA-------------------------------------------------------
Query: ---------------------LMESNEPQAD------------------ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKG
L + P+A A +E + + + +K E STS K ++ +K S +LRYV LSR KKG
Subjt: ---------------------LMESNEPQAD------------------ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKG
Query: KSPFTKCPKSIK--------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYK
KSPF K P +K KKLL+EGH +P +RKGL YK
Subjt: KSPFTKCPKSIK--------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYK
Query: SPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQR
SPE +RITR+G KV D NHITVKEVD +EKE +QRTS F I VA A VF R
Subjt: SPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQR
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| KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.4e-35 | 30.35 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGE---------
SQEK IE+++EGWT+V RKK+K + +KESRL+ + ++ K+Q+ K KKKTR+ K V E+ +DF + +TLA++FP FL D Q E
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGE---------
Query: -------AFE-TVTCHIVDVVEDDDVPASS---------------------SETVTGPGDLSSFSIKDLLSLPQEAKS--VLIDALMESNEPQADAR---
+E T C +D ++D + S + + + +++ L L +E + ++I + ++ DA+
Subjt: -------AFE-TVTCHIVDVVEDDDVPASS---------------------SETVTGPGDLSSFSIKDLLSLPQEAKS--VLIDALMESNEPQADAR---
Query: -----------------------------KETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK----------
+E+ + + K E STS K +V DEK S +LRYVPLSR KKG+SPF + P+ +K
Subjt: -----------------------------KETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK----------
Query: -------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKA
KKLL+EGH +P +RKGLGYK PEP+RITR+GK
Subjt: -------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKA
Query: KVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTL
KV D NHITVKEVD +EKE +QRTS F + VA A VF+RL + E E + Q T+S R F+RL+M E+ +L
Subjt: KVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTL
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| TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 5.5e-40 | 29.18 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
SQEK IE+++E WT+V RKK+K + +KE R +R+ ++ K+Q+ K KKKTR+ K + +E +DF + ITLA++FP FL D Q E V CH
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
Query: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMES-----------------------------------NEP-------------
++ E++ +P S E DLS F++ DLLSLPQE K++LI+AL+ S N P
Subjt: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMES-----------------------------------NEP-------------
Query: ----------------------------------------------------QAD---------------------------------------------
+AD
Subjt: ----------------------------------------------------QAD---------------------------------------------
Query: ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK-------------------------------------
A KE + + +K E STS K ++ DEK S +LRYVPLSR KKG+SPF + P+ +K
Subjt: ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK-------------------------------------
Query: ----------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTS
KKLL+EGH +P +RKGLGYK PEP+RITR+GK K+ D NHITVKEVD KEKE +QRTS
Subjt: ----------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTS
Query: VFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDL
F I VA A VF+RL V E E + Q T++ R F RLS+ + T P + L
Subjt: VFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDL
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| XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus] | 1.7e-33 | 26.43 | Show/hide |
Query: IEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHIVDVVEDD
IE+++EGW +V RKK++ ++ESR +++ ++ K+Q+ K KKKT + K V E +F P + +TLA++ P+ FL D Q E E V CH ++ E++
Subjt: IEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHIVDVVEDD
Query: DVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMESNEPQADARKETVE---------------------------------------------
+P S E DLS F+++DLLSLPQE K++LIDAL+ S + T E
Subjt: DVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMESNEPQADARKETVE---------------------------------------------
Query: -------------------------------------------------DVKAS----------------------------------------------
D+KAS
Subjt: -------------------------------------------------DVKAS----------------------------------------------
Query: -----------------------------------------------------------NLKKGETSTSLVKPKVVKDEKC--SLVLRYVPLSRHKKGKS
N KGE TS K ++KDE + VLRYVPLSR KKG+S
Subjt: -----------------------------------------------------------NLKKGETSTSLVKPKVVKDEKC--SLVLRYVPLSRHKKGKS
Query: PFTKCPKSIK-----------------------------------------------------------------------------KKLLKEGHGLPTT
PF + PK +K KKLL+EGH +P +
Subjt: PFTKCPKSIK-----------------------------------------------------------------------------KKLLKEGHGLPTT
Query: RKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEEST
RKGLGYKSPEP+RIT++GK KV DINHIT++E D+ KE NQR SVF IR VA VF+RL + E E E Q S R VFRRL+ +EEST
Subjt: RKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEEST
Query: LSTPDVTDLQFFE
T FE
Subjt: LSTPDVTDLQFFE
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| XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus] | 3.8e-33 | 26.26 | Show/hide |
Query: IEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHIVDVVEDD
IE+++EGW +V RKK++ ++ESR +++ ++ K+Q+ K KKKT + K V E +F P + +TLA++ P+ FL D Q E E V CH ++ E++
Subjt: IEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHIVDVVEDD
Query: DVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMESNEPQADARKETVE---------------------------------------------
+P S E DLS F+++DLLSLPQE K++LIDAL+ S + T E
Subjt: DVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMESNEPQADARKETVE---------------------------------------------
Query: -------------------------------------------------DVKAS----------------------------------------------
D+KAS
Subjt: -------------------------------------------------DVKAS----------------------------------------------
Query: -----------------------------------------------------------NLKKGETSTSLVKPKVVKDEKC--SLVLRYVPLSRHKKGKS
N KGE TS K ++KDE + VLRYVPLSR KKG+S
Subjt: -----------------------------------------------------------NLKKGETSTSLVKPKVVKDEKC--SLVLRYVPLSRHKKGKS
Query: PFTKCPKSIK-----------------------------------------------------------------------------KKLLKEGHGLPTT
PF + PK +K KKLL+EGH +P +
Subjt: PFTKCPKSIK-----------------------------------------------------------------------------KKLLKEGHGLPTT
Query: RKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEEST
RKGLGYKSPEP+RIT++GK KV DINHIT++E D+ KE NQR SVF IR VA VF+RL + E E E Q + R VFRRL+ +EEST
Subjt: RKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEEST
Query: LSTPDVTDLQFFE
T FE
Subjt: LSTPDVTDLQFFE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TPR5 RNase H domain-containing protein | 4.6e-32 | 45.05 | Show/hide |
Query: ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK-------------KKLLKEGHGLPTTRKGLGYKSPEP
A KE + + + +KGE STS K ++ DEK S L+LRYVPLSR +KG+SPF K P+ +K KKLL+EGH +P +RKG GYKSPEP
Subjt: ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK-------------KKLLKEGHGLPTTRKGLGYKSPEP
Query: VRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDLQF
+ I R+ K KV D NHITV EVD +EKE +QR S F IR V +VF+RL V +TE + Q T+S + +RL+M +E+ T T
Subjt: VRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDLQF
Query: FE
FE
Subjt: FE
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| A0A5D3BG93 Ty3-gypsy retrotransposon protein | 1.4e-33 | 30.85 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
SQEK IE+++EGWT+V RKK+K + +KESR +R+ + +Q K KKKTR+ K V EE +DF +TLA++FP FL D Q E V C
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
Query: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDA-------------------------------------------------------
++ +++ +P E DLS F++ LLSLPQE K++LI+A
Subjt: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDA-------------------------------------------------------
Query: ---------------------LMESNEPQAD------------------ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKG
L + P+A A +E + + + +K E STS K ++ +K S +LRYV LSR KKG
Subjt: ---------------------LMESNEPQAD------------------ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKG
Query: KSPFTKCPKSIK--------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYK
KSPF K P +K KKLL+EGH +P +RKGL YK
Subjt: KSPFTKCPKSIK--------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYK
Query: SPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQR
SPE +RITR+G KV D NHITVKEVD +EKE +QRTS F I VA A VF R
Subjt: SPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQR
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| A0A5D3BSG5 Uncharacterized protein | 1.7e-31 | 26.38 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
SQEK IE+++EGWT+V RKK+K + +KE R +R+ +K K+Q+ K KKKTR+ K + EE +DF + +TLA++FP FL D Q E V CH
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
Query: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMESNEPQADARKETVE--------------------------------------
++ +E++++P S E DLS F++ DLLSLPQE K +LI+AL+ S + A T E
Subjt: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMESNEPQADARKETVE--------------------------------------
Query: --------------------------------------------------------DVKASNL-------------------------------------
D+K S L
Subjt: --------------------------------------------------------DVKASNL-------------------------------------
Query: ---KKGETSTSL----------VKPKVVKDEKCSLVLRYVPL------------------------------------SRHKKGKSPFTKCPKSIK----
KK E ++ K + D V VPL + KKG+SPF + P+ +K
Subjt: ---KKGETSTSL----------VKPKVVKDEKCSLVLRYVPL------------------------------------SRHKKGKSPFTKCPKSIK----
Query: -------------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRI
KKLL+EGH +P +RKGLGYKSPEP+RI
Subjt: -------------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRI
Query: TRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDLQFFE
TR+GK KV D NHITVKEVD +E E +QRTS F I VA VF+RL + E E + Q T++ R VF+RL++ EE+ T T FE
Subjt: TRRGKAKVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDLQFFE
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| A0A5D3BY54 Ty3-gypsy retrotransposon protein | 1.2e-35 | 30.35 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGE---------
SQEK IE+++EGWT+V RKK+K + +KESRL+ + ++ K+Q+ K KKKTR+ K V E+ +DF + +TLA++FP FL D Q E
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGE---------
Query: -------AFE-TVTCHIVDVVEDDDVPASS---------------------SETVTGPGDLSSFSIKDLLSLPQEAKS--VLIDALMESNEPQADAR---
+E T C +D ++D + S + + + +++ L L +E + ++I + ++ DA+
Subjt: -------AFE-TVTCHIVDVVEDDDVPASS---------------------SETVTGPGDLSSFSIKDLLSLPQEAKS--VLIDALMESNEPQADAR---
Query: -----------------------------KETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK----------
+E+ + + K E STS K +V DEK S +LRYVPLSR KKG+SPF + P+ +K
Subjt: -----------------------------KETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK----------
Query: -------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKA
KKLL+EGH +P +RKGLGYK PEP+RITR+GK
Subjt: -------------------------------------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKA
Query: KVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTL
KV D NHITVKEVD +EKE +QRTS F + VA A VF+RL + E E + Q T+S R F+RL+M E+ +L
Subjt: KVADINHITVKEVDDPKEKESVNQRTSVFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTL
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| A0A5D3C0W6 Ty3-gypsy retrotransposon protein | 2.7e-40 | 29.18 | Show/hide |
Query: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
SQEK IE+++E WT+V RKK+K + +KE R +R+ ++ K+Q+ K KKKTR+ K + +E +DF + ITLA++FP FL D Q E V CH
Subjt: SQEKYDSIEDENEGWTLVVCRKKQKQSYARKESRLFRDSKKKVKSQRKKGKKKTRRSKPVVEESEDFFCPPQPITLAEYFPRCFLDDSQGEAFETVTCHI
Query: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMES-----------------------------------NEP-------------
++ E++ +P S E DLS F++ DLLSLPQE K++LI+AL+ S N P
Subjt: VDVVEDDDVPASSSETVTGPGDLSSFSIKDLLSLPQEAKSVLIDALMES-----------------------------------NEP-------------
Query: ----------------------------------------------------QAD---------------------------------------------
+AD
Subjt: ----------------------------------------------------QAD---------------------------------------------
Query: ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK-------------------------------------
A KE + + +K E STS K ++ DEK S +LRYVPLSR KKG+SPF + P+ +K
Subjt: ARKETVEDVKASNLKKGETSTSLVKPKVVKDEKCS--LVLRYVPLSRHKKGKSPFTKCPKSIK-------------------------------------
Query: ----------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTS
KKLL+EGH +P +RKGLGYK PEP+RITR+GK K+ D NHITVKEVD KEKE +QRTS
Subjt: ----------------------------------------KKLLKEGHGLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVKEVDDPKEKESVNQRTS
Query: VFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDL
F I VA A VF+RL V E E + Q T++ R F RLS+ + T P + L
Subjt: VFRLIRQPVAHASVFQRLIVNETEEESAQPTNSSTRSLVFRRLSMLIGEEESTLSTPDVTDL
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