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Spg034742 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034742
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold7:45814085..45815479
RNA-Seq ExpressionSpg034742
SyntenySpg034742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065306.1 retrotransposon protein [Cucumis melo var. makuwa]4.6e-0446.43Show/hide
Query:  MESKRHKELYTELQFIPVISMED--DIAGPLLAELTMLNHLMDFPPEWKFDYCMQV
        +ES  HK LYTELQ IP + ++D   +A  LL + TML+  +D+P EWK+  CM++
Subjt:  MESKRHKELYTELQFIPVISMED--DIAGPLLAELTMLNHLMDFPPEWKFDYCMQV
TrEMBL top hitse value%identityAlignment
A0A5A7VG45 Retrotransposon protein2.2e-0446.43Show/hide
Query:  MESKRHKELYTELQFIPVISMED--DIAGPLLAELTMLNHLMDFPPEWKFDYCMQV
        +ES  HK LYTELQ IP + ++D   +A  LL + TML+  +D+P EWK+  CM++
Subjt:  MESKRHKELYTELQFIPVISMED--DIAGPLLAELTMLNHLMDFPPEWKFDYCMQV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAAGCGTCACAAGGAGTTGTATACAGAGCTGCAATTCATACCAGTAATTTCGATGGAGGACGACATCGCAGGGCCATTACTTGCTGAGTTGACCATGCTGAA
TCACCTCATGGACTTTCCTCCAGAGTGGAAGTTTGACTATTGCATGCAGGTAACTAAGCTTCATGCATTCACAAATGACTGGGAGAAAATCAGGCTAGGATGTGAAACAT
GCGTTGAAATCATGAATTTGCAATATGGAACACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCGAAGCGTCACAAGGAGTTGTATACAGAGCTGCAATTCATACCAGTAATTTCGATGGAGGACGACATCGCAGGGCCATTACTTGCTGAGTTGACCATGCTGAA
TCACCTCATGGACTTTCCTCCAGAGTGGAAGTTTGACTATTGCATGCAGGTAACTAAGCTTCATGCATTCACAAATGACTGGGAGAAAATCAGGCTAGGATGTGAAACAT
GCGTTGAAATCATGAATTTGCAATATGGAACACTTTAG
Protein sequenceShow/hide protein sequence
MESKRHKELYTELQFIPVISMEDDIAGPLLAELTMLNHLMDFPPEWKFDYCMQVTKLHAFTNDWEKIRLGCETCVEIMNLQYGTL