CuGenDBv2

Gene ID	Spg034746
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	mitotic spindle checkpoint protein MAD1
Genome location	scaffold7:45730776..45733728
RNA-Seq Expression	Spg034746
Synteny	Spg034746
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0007094 - mitotic spindle assembly checkpoint (biological process) GO:0010792 - DNA double-strand break processing involved in repair via single-strand annealing (biological process) GO:0051315 - attachment of mitotic spindle microtubules to kinetochore (biological process) GO:0000776 - kinetochore (cellular component) GO:0005635 - nuclear envelope (cellular component) GO:0035861 - site of double-strand break (cellular component) GO:0072686 - mitotic spindle (cellular component) GO:0000403 - Y-form DNA binding (molecular function) GO:0000406 - double-strand/single-strand DNA junction binding (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0003690 - double-stranded DNA binding (molecular function) GO:0003697 - single-stranded DNA binding (molecular function) GO:0070336 - flap-structured DNA binding (molecular function)
InterPro domains	IPR008672 - Spindle assembly checkpoint component Mad1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601670.1 Mitotic spindle checkpoint protein MAD1, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-43

92.93

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDVRALPDSSS GASDLPLVIYEDPLP+VPATTQPE SHEPSE MLCTYQCRQMVK+DFLDALSNAEKQV DYELKLG+LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

XP_022933081.1 mitotic spindle checkpoint protein MAD1 [Cucurbita moschata]

1.6e-43

92.93

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDVRALPDSSS GASDLPLVIYEDPLP+VPATTQPE SHEPSE MLCTYQCRQMVK+DFLDALSNAEKQV DYELKLG+LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

XP_022997454.1 mitotic spindle checkpoint protein MAD1 [Cucurbita maxima]

3.5e-43

92.93

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDVRALPDSSS GASDLPLVIYEDPLP+VPATTQPE SHEPSE MLCTYQCRQMVK+DFLDALSNAEKQV DYELKLG LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

XP_023530274.1 mitotic spindle checkpoint protein MAD1 [Cucurbita pepo subsp. pepo]

4.5e-43

91.92

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRS+VRALPDSSS GASDLPLVIYEDPLP+VPATTQPE SHEPSE MLCTYQCRQMVK+DFLDALSNAEKQV DYELKLG+LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

XP_031741821.1 mitotic spindle checkpoint protein MAD1 isoform X2 [Cucumis sativus]

5.0e-42

89.9

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDV +LPDSS   ASDLPLVIYEDPLPLVPATT+P SSHEPS+HMLCTYQCRQMVKSDFLDALSNAEKQV DYELKLG+LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV95 Uncharacterized protein

2.4e-42

89.9

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDV +LPDSS   ASDLPLVIYEDPLPLVPATT+P SSHEPS+HMLCTYQCRQMVKSDFLDALSNAEKQV DYELKLG+LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

A0A1S3CCD1 mitotic spindle checkpoint protein MAD1

3.2e-42

90.91

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDV +LPDSS   ASDLPLVIYEDPLPLVPATTQP SSH PS+HMLCTYQCRQMVKSDFLDALSNAEKQV DYELKLGMLNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

A0A6J1DQU7 mitotic spindle checkpoint protein MAD1 isoform X2

1.4e-37

84.69

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSK
        MI+RTPP KKQRSDVRALPD+SSG ASDLPLVIYEDPLP +P T+QPE SH  SE MLCTYQCRQMVKSDFLDALSNAEKQV DYELKLG +NENLSK
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSK

A0A6J1EY58 mitotic spindle checkpoint protein MAD1

7.6e-44

92.93

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDVRALPDSSS GASDLPLVIYEDPLP+VPATTQPE SHEPSE MLCTYQCRQMVK+DFLDALSNAEKQV DYELKLG+LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

A0A6J1KBD3 mitotic spindle checkpoint protein MAD1

1.7e-43

92.93

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV
        MIVRTPPPKKQRSDVRALPDSSS GASDLPLVIYEDPLP+VPATTQPE SHEPSE MLCTYQCRQMVK+DFLDALSNAEKQV DYELKLG LNENLSKV
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKV

SwissProt top hits

e value

%identity

Alignment

Q9LTY1 Mitotic spindle checkpoint protein MAD1

2.0e-17

52.53

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Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYED-PLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSK
        MI+RTP PK+ RSD    P  +    S   L+IYED PLP  PA  Q    H   +H LCTYQCRQMVK+D LDALS AEKQV++ + KL  LN N ++
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYED-PLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSK

Arabidopsis top hits

e value

%identity

Alignment

AT5G49880.1 mitotic checkpoint family protein

1.4e-18

52.53

Show/hide

Query:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYED-PLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSK
        MI+RTP PK+ RSD    P  +    S   L+IYED PLP  PA  Q    H   +H LCTYQCRQMVK+D LDALS AEKQV++ + KL  LN N ++
Subjt:  MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYED-PLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSK

Sequences

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CDS sequence

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ATGATTGTGAGGACTCCTCCACCGAAGAAGCAACGATCCGATGTTAGGGCTCTGCCTGATTCCTCATCAGGAGGTGCCTCAGATCTGCCGCTCGTTATCTATGAAGATCC
TCTTCCCTTGGTGCCAGCAACGACCCAACCAGAGTCGTCGCACGAGCCCTCTGAGCACATGCTCTGCACTTACCAATGCCGGCAAATGGTGAAGTCAGACTTTTTAGATG
CATTAAGCAATGCAGAGAAGCAAGTTGATGATTATGAATTGAAGTTAGGCATGTTGAATGAGAACCTCTCCAAAGTTGGTGAGTGA

mRNA sequence

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Protein sequence

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MIVRTPPPKKQRSDVRALPDSSSGGASDLPLVIYEDPLPLVPATTQPESSHEPSEHMLCTYQCRQMVKSDFLDALSNAEKQVDDYELKLGMLNENLSKVGE

Spg034746 (gene) of Sponge gourd (cylindrica) v1 genome