| GenBank top hits | e value | %identity | Alignment |
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| KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.5e-16 | 33.9 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKA--------
++A+L+Q KVAK +LD G++P ++E +K++M E+A+S+I+L+L LW++ +K K+D++
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKA--------
Query: ---LLDPELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+ +L N GE++ +Q +ILLN L +Y E+KAA+KY +D+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: ---LLDPELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| KAA0050719.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 1.4e-16 | 35.03 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQEMKALLIQQKVDKALLDP------------------
++A+L+Q KVAK +LD +LP ++E +K++M E+A+S+I+L+L LW++ L + ++K +
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQEMKALLIQQKVDKALLDP------------------
Query: -------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+L N GE++ +QAVILLN L +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: -------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| KAA0067607.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 3.2e-16 | 36.42 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ----------EMKALLIQQKVDKAL-----LDP---
++ +L+Q KVAK +LD +LP ++E +K++M E+ +S+I+L+L LW++ K + K+D++ LD
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ----------EMKALLIQQKVDKAL-----LDP---
Query: ---ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+L+N GE++ +QAVILLN L +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: ---ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| TXG70425.1 hypothetical protein EZV62_005360 [Acer yangbiense] | 1.9e-16 | 44.44 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIIL----HLFGLWRQEMKALLIQQKVDKALLDPELAN--SGEEVKGVDQAVILLNFLHVSY
MKA+L+QQK AK+L + LP +LS ++KQ++ E A+++IIL +LFG + K+ L D L+ ELAN S E + +QAVI+LNFL SY
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIIL----HLFGLWRQEMKALLIQQKVDKALLDPELAN--SGEEVKGVDQAVILLNFLHVSY
Query: NEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKK
++KAA+KY RD+L+++ VL AL+ +E+E + EK+
Subjt: NEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKK
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 3.2e-16 | 36.72 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKAL-----LD
++A+L+Q KVAK +LD +LP ++E +K++M E+A+S+I+L+L LW++ +K K+D++ LD
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKAL-----LD
Query: P------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+L N GE++ +QAVILLN L +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: P------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UB25 Putative gag-pol polyprotein | 6.9e-17 | 35.03 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQEMKALLIQQKVDKALLDP------------------
++A+L+Q KVAK +LD +LP ++E +K++M E+A+S+I+L+L LW++ L + ++K +
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQEMKALLIQQKVDKALLDP------------------
Query: -------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+L N GE++ +QAVILLN L +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: -------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| A0A5A7VKC2 Retrotransposon protein, putative, Ty1-copia subclass | 1.5e-16 | 36.42 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ----------EMKALLIQQKVDKAL-----LDP---
++ +L+Q KVAK +LD +LP ++E +K++M E+ +S+I+L+L LW++ K + K+D++ LD
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ----------EMKALLIQQKVDKAL-----LDP---
Query: ---ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+L+N GE++ +QAVILLN L +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: ---ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| A0A5C7IML8 gag_pre-integrs domain-containing protein | 9.1e-17 | 44.44 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIIL----HLFGLWRQEMKALLIQQKVDKALLDPELAN--SGEEVKGVDQAVILLNFLHVSY
MKA+L+QQK AK+L + LP +LS ++KQ++ E A+++IIL +LFG + K+ L D L+ ELAN S E + +QAVI+LNFL SY
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIIL----HLFGLWRQEMKALLIQQKVDKALLDPELAN--SGEEVKGVDQAVILLNFLHVSY
Query: NEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKK
++KAA+KY RD+L+++ VL AL+ +E+E + EK+
Subjt: NEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKK
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| A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.6e-16 | 33.9 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKA--------
++A+L+Q KVAK +LD G++P ++E +K++M E+A+S+I+L+L LW++ +K K+D++
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKA--------
Query: ---LLDPELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+ +L N GE++ +Q +ILLN L +Y E+KAA+KY +D+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: ---LLDPELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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| A0A5D3DNU1 Putative gag-pol polyprotein | 1.5e-16 | 36.72 | Show/hide |
Query: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKAL-----LD
++A+L+Q KVAK +LD +LP ++E +K++M E+A+S+I+L+L LW++ +K K+D++ LD
Subjt: MKALLIQQKVAKALLDPGQLPPTLSEDDKQEMREIAHSSIILHLFG--------------LWRQ--------------EMKALLIQQKVDKAL-----LD
Query: P------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
+L N GE++ +QAVILLN L +Y E+KAA+KY RD+LT+ +VLDALK + LE K E+KDG++L +G
Subjt: P------ELANSGEEVKGVDQAVILLNFLHVSYNEIKAALKYDRDNLTVDMVLDALKKKELEFKIEKKDGDVLFGKG
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