| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032541.1 pol protein [Cucumis melo var. makuwa] | 3.8e-16 | 43.95 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG R GR GRG GR PE PP P V+ P + ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| KAA0036881.1 gag protease polyprotein [Cucumis melo var. makuwa] | 8.4e-16 | 43.95 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG R GR GRG GR PE PP P V+ P ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| KAA0045430.1 gag protease polyprotein [Cucumis melo var. makuwa] | 9.9e-17 | 44.59 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG GR GR GRG GR PE PP P V+ P ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| KAA0051357.1 pol protein [Cucumis melo var. makuwa] | 6.4e-16 | 43.06 | Show/hide |
Query: MPPRARG--RGRVRGRGRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQAPQNNEALSREARCLRDFRK
MPPR RG RG GRGRG GR PE+ P P PA PV A++ A Q + LS EA+ LRDFRK
Subjt: MPPRARG--RGRVRGRGRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQAPQNNEALSREARCLRDFRK
Query: WDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVVHL
++P FDG+ DPT A++WLSS+ET+FR+M CPEDQKV C V +
Subjt: WDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVVHL
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| KAA0055932.1 pol protein [Cucumis melo var. makuwa] | 1.1e-15 | 43.95 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG R GR GRG GR PE PP P V+ P ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SSL3 Reverse transcriptase | 1.8e-16 | 43.95 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG R GR GRG GR PE PP P V+ P + ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| A0A5A7T5M7 Gag protease polyprotein | 4.1e-16 | 43.95 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG R GR GRG GR PE PP P V+ P ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| A0A5A7TQJ4 Gag protease polyprotein | 4.8e-17 | 44.59 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG GR GR GRG GR PE PP P V+ P ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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| A0A5A7UAA8 Reverse transcriptase | 3.1e-16 | 43.06 | Show/hide |
Query: MPPRARG--RGRVRGRGRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQAPQNNEALSREARCLRDFRK
MPPR RG RG GRGRG GR PE+ P P PA PV A++ A Q + LS EA+ LRDFRK
Subjt: MPPRARG--RGRVRGRGRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQAPQNNEALSREARCLRDFRK
Query: WDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVVHL
++P FDG+ DPT A++WLSS+ET+FR+M CPEDQKV C V +
Subjt: WDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVVHL
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| A0A5A7UJ81 Reverse transcriptase | 5.3e-16 | 43.95 | Show/hide |
Query: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
MPPR RG R GR GRG GR PE PP P V+ P ++ Q +QAA+A LA +Q QA P EA
Subjt: MPPRARGRGRVRGR-GRGRGRTTPEQVVPPMGHGENPPENPQVEQPGPAVGPVTVDIQAIIQTAVQAAVAGVLAGRQAQA----------PQNNEA----
Query: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
LS EA+ LRDFRK++P FDG+ +PT A++WL+SIET+FR+M CPEDQKV C V
Subjt: --LSREARCLRDFRKWDPCPFDGASRDPTVAELWLSSIETVFRHMNCPEDQKVYCVV
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