; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034782 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034782
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA-binding protein 48
Genome locationscaffold3:27444078..27457841
RNA-Seq ExpressionSpg034782
SyntenySpg034782
Gene Ontology termsGO:0005654 - nucleoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR039599 - RNA-binding protein 48


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598220.1 RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia]7.2e-0485.29Show/hide
Query:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV
        DYFAS SMNQTV LVREKLDKIQS SE L+AGPV
Subjt:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV

KAG6598220.1 RNA-binding protein 48, partial [Cucurbita argyrosperma subsp. sororia]3.4e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

XP_022997621.1 RNA-binding protein 48 isoform X1 [Cucurbita maxima]5.5e-0485.29Show/hide
Query:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV
        DYFAS SMNQTV LVREKLDKIQS SE L+AGPV
Subjt:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV

XP_022997622.1 RNA-binding protein 48 isoform X2 [Cucurbita maxima]3.4e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

XP_022997623.1 RNA-binding protein 48 isoform X3 [Cucurbita maxima]3.4e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

XP_023545649.1 RNA-binding protein 48 [Cucurbita pepo subsp. pepo]3.4e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

XP_023545649.1 RNA-binding protein 48 [Cucurbita pepo subsp. pepo]2.1e-0382.35Show/hide
Query:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV
        DYFAS SMNQTV LVREKLDKIQS  E L+AGPV
Subjt:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV

XP_023545649.1 RNA-binding protein 48 [Cucurbita pepo subsp. pepo]3.4e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

TrEMBL top hitse value%identityAlignment
A0A6J1DGJ2 RNA-binding protein 486.2e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYTDE PAVRVYTICDESR     +LIVRNVP+LGCGDDLLKLFSSYGNVE+              CKPMDAEECD+FTDVYFVKFHLV+NARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAPEFESLLDTKEKLEVRRREVLAR DSGRS+GSAV ST TK TNP+HSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

A0A6J1DGJ2 RNA-binding protein 482.9e-0332.74Show/hide
Query:  SVKSALEAIQLNRRFLKEDISVQIWEGSIPQKVKFSLWSTAH-----KSTNTMDRIKSSLQPLLGVPFIKLF-------DYFASVSMNQTVRLVREKLDK
        S+    E +++ RR +   +     +GS  +     L + AH     +  N++++       L+  P +          D+FAS SMN+TV LVREKLDK
Subjt:  SVKSALEAIQLNRRFLKEDISVQIWEGSIPQKVKFSLWSTAH-----KSTNTMDRIKSSLQPLLGVPFIKLF-------DYFASVSMNQTVRLVREKLDK

Query:  IQSTSELLQAGPV
        IQS+SE L+ GP+
Subjt:  IQSTSELLQAGPV

A0A6J1DGJ2 RNA-binding protein 482.4e-6979.55Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR +SGR RGSAV+S  TKFTNPSHSHYTLEQK+S +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

A0A6J1K5M2 RNA-binding protein 481.6e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

A0A6J1K7Z4 RNA-binding protein 481.6e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

A0A6J1K7Z4 RNA-binding protein 482.7e-0485.29Show/hide
Query:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV
        DYFAS SMNQTV LVREKLDKIQS SE L+AGPV
Subjt:  DYFASVSMNQTVRLVREKLDKIQSTSELLQAGPV

A0A6J1K7Z4 RNA-binding protein 481.6e-7080.68Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        MPRYT+EPPAVRVYTICDESR     YLIVRNVP+LGCGD+LLKLFSSYGN+E+              CKPMDAEECD+FTDVYFVKFHLVSNARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        LDEFVF+GNRLQVSYAP+FESLLDTKEKLEVRRREVLAR DSGR RGSAV+S  TKFTNPSHSHYTLEQKNS +KR
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

SwissProt top hitse value%identityAlignment
A4FVJ7 RNA-binding protein 483.1e-1835.29Show/hide
Query:  AVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGN
        AV+VYTI  ESR     YL+V+ VP++G   +L++LF+ YG +E+               +P+D    + FT+VY ++F  +++AR AKR  DE  F G 
Subjt:  AVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGN

Query:  RLQVSYAPEFESLLDTKEKLEVRRREVLARSDSG---RSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR
        +L V YAPE+E++ +TK+KL+ RRR V   S +     S+ + V++ ++  T+   +   + QKN  + R
Subjt:  RLQVSYAPEFESLLDTKEKLEVRRREVLARSDSG---RSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKR

Q561R3 RNA-binding protein 481.2e-1740.48Show/hide
Query:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI
        P AV+VYTI  ES+     YL+++ VP++G   +L++ F+ YG +E  N L              D    +DFT+VY +KF  + +AR AK+K+DE  F 
Subjt:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI

Query:  GNRLQVSYAPEFESLLDTKEKLEVRR
        G  L V YAPEFE++ +T++KLE R+
Subjt:  GNRLQVSYAPEFESLLDTKEKLEVRR

Q5R4U2 RNA-binding protein 481.8e-1839.26Show/hide
Query:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI
        P AV+VYTI  ES+     YL+++ VP++G   +L++ F+ YG +E  N L              D    +DFT+VY +KF  + +AR AKRK+DE  F 
Subjt:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI

Query:  GNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDS
        G  L V YAPEFE++ +T++KL+VR+  V+  +++
Subjt:  GNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDS

Q5RL73 RNA-binding protein 486.9e-1838.52Show/hide
Query:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI
        P AV+VYTI  ES+     YL+++ VP++G   +L++ F+ YG +E  N L              D    +DFT+VY +KF  + +AR AKRK+DE  F 
Subjt:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI

Query:  GNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDS
        G  L V YAPEFE++ +T++KL++R+  V+  +++
Subjt:  GNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDS

Q8K2X2 RNA-binding protein 483.4e-1739.68Show/hide
Query:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI
        P AV+VYTI  ES+     YL+++ VP++G   +L++ F+ YG +E  N L              D    +DFT+VY +KF  + +AR AK+K+DE  F 
Subjt:  PPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFI

Query:  GNRLQVSYAPEFESLLDTKEKLEVRR
        G  L V YAPEFE++ +T++KL+ R+
Subjt:  GNRLQVSYAPEFESLLDTKEKLEVRR

Arabidopsis top hitse value%identityAlignment
AT2G27790.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-4657.76Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        M RY DE PAVRVYT+CDESR     Y+IVRNVP+LGCGDDL++LF +YG VE+              CKPMDAE+C +FTDVY++KF L++NARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS
        LDE  F+GNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR +  + +    +S  TK   P+
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS

AT2G27790.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-4657.76Show/hide
Query:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK
        M RY DE PAVRVYT+CDESR     Y+IVRNVP+LGCGDDL++LF +YG VE+              CKPMDAE+C +FTDVY++KF L++NARFAKRK
Subjt:  MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRK

Query:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS
        LDE  F+GNRLQ+SYAPE+E++ DTK+KLE RR+EVLAR +  + +    +S  TK   P+
Subjt:  LDEFVFIGNRLQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS

AT5G27300.1 pentatricopeptide (PPR) repeat-containing protein1.5e-3653.74Show/hide
Query:  TICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGNRLQVS
        ++CDESR     Y+IVRNVP+LGCGDDL++LF +YG VE+              CKPMDAE+C +FTDVY++KF L++NA    RKLDE  F+GNRLQ+S
Subjt:  TICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGNRLQVS

Query:  YAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS
        YAPE+ES+ DTKEKLE RR+EVLAR +  +++    +S  TK   P+
Subjt:  YAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS

AT5G27300.2 pentatricopeptide (PPR) repeat-containing protein1.5e-3653.74Show/hide
Query:  TICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGNRLQVS
        ++CDESR     Y+IVRNVP+LGCGDDL++LF +YG VE+              CKPMDAE+C +FTDVY++KF L++NA    RKLDE  F+GNRLQ+S
Subjt:  TICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGNRLQVS

Query:  YAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS
        YAPE+ES+ DTKEKLE RR+EVLAR +  +++    +S  TK   P+
Subjt:  YAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCTATACAGACGAGCCCCCCGCGGTTCGCGTCTATACGATTTGCGATGAGTCTAGGTCTACTCCGCCTCTGTATTTGATTGTGAGGAACGTTCCGTCATTGGG
TTGCGGAGATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACGTTGAAGACCTCAATCCTCTGTTTTCTCCTCTGTTTTACGGCTCCCAAAGGTGTAAACCAATGGATG
CAGAAGAATGTGACGACTTCACAGACGTTTATTTTGTGAAATTTCATTTGGTTAGCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCATTGGTAATCGG
CTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTAGAAGTTAGGAGGCGAGAGGTTTTAGCACGATCAGATTCTGGAAGATCAAGAGG
ATCTGCAGTTAGTTCAACCGCCACAAAGTTTACAAATCCGTCTCATTCTCACTATACCCTTGAACAGAAGAACTCTCATAAAAAGAGGTTGGGGATGGTGAGACACTTCA
AAGACTACAGAGAGATGATCCAGGAGTTCCTCTTCCATCCGTCGTTCCGCGATAAGGAGAGGTTTTTATGGTTAGTTGGGGTGTGTGCTGTTTTATTGGGCCTTTGGGGT
GAGAGGAATGACAGGGTATTTCGTGGTCTTGAGAGGAGTCCTTCCGATGTATGGACTCTCACTAGATTCTATGTTTCTCTCTGGGCCTCGATTTCCAAGGCTTTTTGTTC
AGATGACCAGTATGTATCTTTAGTCGAAGGTTCAGATGACCAGGTTGGGGATTTGGTGATCTCAAGTGAGAAGGGCTGGAGAGAGGTGGCTACACCTTGGAGAAATGAGC
ATGATGCATTGGACGTGGTTTTGCATCCAAGTGTAGAGAGAAGAACTTTTGCCGCATCCAAGTGTGGAGAGAAGAATTTTTGGGTGACAGGTGAACAAAACGATGATGGA
GGTGATGGAAACAATACTTTAATAAGTTCTGGTGTTGGATTTAACGAAAAAAGCAATTGTTGGGGTCACTCCATCCCCATTATCTTCTTGCAAAATGGGTGTGGAGGTTT
GAAAAAGAGAAATCTGCTTTGTGGCGTTCAGTGGATTTCGATGGGTAAAGGAATCGTCATAAAAGATTTGTGGAAAGGTAACACCTGGGACCTCTACTTTCGAAGGATTT
TGTTTGACAGGGAGCTGGAGGAGTGGAATAGCTTGGCTTCTCTGATTCATAGCTATAATCCCACGAATAGGGAAGATGTGCTGACCTGGAGGTTGGATAAAACATGGATG
TTCTCAGTCAAGTCAGCTTTGGAAGCGATTCAGTTAAATAGAAGATTTTTGAAGGAAGATATCAGTGTCCAAATCTGGGAAGGTTCTATTCCTCAGAAGGTGAAATTCTC
CCTATGGTCTACGGCTCATAAAAGTACTAATACTATGGATAGAATCAAAAGCAGTTTACAGCCTCTACTTGGAGTACCCTTCATAAAGCTTTTTGATTACTTCGCATCTG
TATCTATGAATCAAACTGTGCGTCTCGTCAGAGAAAAGCTGGATAAGATTCAATCAACCAGCGAACTTTTGCAAGCTGGACCCGTGCTTGTATTACGATCAAATGTATTT
TGTGAACTTCATCTATATTTTGGGCCTTATCTTAATATTAAGTATGAAGTATCCTATCAAAGTGGTATCAGAGCGTTCATCCTGGGGAAAACACGAGCAATGTCGCAGTG
CCAGATAGAGGAAAGGATGAGCGAGTCAGAAAAGAGTGTGGAAGTTCTGAGGGAGAAGGTACCAGAGCTCGAGAGAACAGTGGTCGAGATCAACAAAAACATTGAACGGT
TGTTCATCAGCATGGAAGACCAGAGGTTAGTGACGATGGAAACGCAAAAGGCTCTAACTAACCTGGTAACTCAAAAGTCTTGCAGCGAACAGGGGACCAATACTGAAACT
GGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCTATACAGACGAGCCCCCCGCGGTTCGCGTCTATACGATTTGCGATGAGTCTAGGTCTACTCCGCCTCTGTATTTGATTGTGAGGAACGTTCCGTCATTGGG
TTGCGGAGATGACTTGCTCAAATTGTTCTCCTCCTACGGAAACGTTGAAGACCTCAATCCTCTGTTTTCTCCTCTGTTTTACGGCTCCCAAAGGTGTAAACCAATGGATG
CAGAAGAATGTGACGACTTCACAGACGTTTATTTTGTGAAATTTCATTTGGTTAGCAATGCCAGGTTTGCAAAAAGAAAATTGGATGAGTTTGTTTTCATTGGTAATCGG
CTGCAAGTCTCTTATGCTCCTGAGTTTGAAAGCTTGCTTGATACAAAGGAAAAGCTAGAAGTTAGGAGGCGAGAGGTTTTAGCACGATCAGATTCTGGAAGATCAAGAGG
ATCTGCAGTTAGTTCAACCGCCACAAAGTTTACAAATCCGTCTCATTCTCACTATACCCTTGAACAGAAGAACTCTCATAAAAAGAGGTTGGGGATGGTGAGACACTTCA
AAGACTACAGAGAGATGATCCAGGAGTTCCTCTTCCATCCGTCGTTCCGCGATAAGGAGAGGTTTTTATGGTTAGTTGGGGTGTGTGCTGTTTTATTGGGCCTTTGGGGT
GAGAGGAATGACAGGGTATTTCGTGGTCTTGAGAGGAGTCCTTCCGATGTATGGACTCTCACTAGATTCTATGTTTCTCTCTGGGCCTCGATTTCCAAGGCTTTTTGTTC
AGATGACCAGTATGTATCTTTAGTCGAAGGTTCAGATGACCAGGTTGGGGATTTGGTGATCTCAAGTGAGAAGGGCTGGAGAGAGGTGGCTACACCTTGGAGAAATGAGC
ATGATGCATTGGACGTGGTTTTGCATCCAAGTGTAGAGAGAAGAACTTTTGCCGCATCCAAGTGTGGAGAGAAGAATTTTTGGGTGACAGGTGAACAAAACGATGATGGA
GGTGATGGAAACAATACTTTAATAAGTTCTGGTGTTGGATTTAACGAAAAAAGCAATTGTTGGGGTCACTCCATCCCCATTATCTTCTTGCAAAATGGGTGTGGAGGTTT
GAAAAAGAGAAATCTGCTTTGTGGCGTTCAGTGGATTTCGATGGGTAAAGGAATCGTCATAAAAGATTTGTGGAAAGGTAACACCTGGGACCTCTACTTTCGAAGGATTT
TGTTTGACAGGGAGCTGGAGGAGTGGAATAGCTTGGCTTCTCTGATTCATAGCTATAATCCCACGAATAGGGAAGATGTGCTGACCTGGAGGTTGGATAAAACATGGATG
TTCTCAGTCAAGTCAGCTTTGGAAGCGATTCAGTTAAATAGAAGATTTTTGAAGGAAGATATCAGTGTCCAAATCTGGGAAGGTTCTATTCCTCAGAAGGTGAAATTCTC
CCTATGGTCTACGGCTCATAAAAGTACTAATACTATGGATAGAATCAAAAGCAGTTTACAGCCTCTACTTGGAGTACCCTTCATAAAGCTTTTTGATTACTTCGCATCTG
TATCTATGAATCAAACTGTGCGTCTCGTCAGAGAAAAGCTGGATAAGATTCAATCAACCAGCGAACTTTTGCAAGCTGGACCCGTGCTTGTATTACGATCAAATGTATTT
TGTGAACTTCATCTATATTTTGGGCCTTATCTTAATATTAAGTATGAAGTATCCTATCAAAGTGGTATCAGAGCGTTCATCCTGGGGAAAACACGAGCAATGTCGCAGTG
CCAGATAGAGGAAAGGATGAGCGAGTCAGAAAAGAGTGTGGAAGTTCTGAGGGAGAAGGTACCAGAGCTCGAGAGAACAGTGGTCGAGATCAACAAAAACATTGAACGGT
TGTTCATCAGCATGGAAGACCAGAGGTTAGTGACGATGGAAACGCAAAAGGCTCTAACTAACCTGGTAACTCAAAAGTCTTGCAGCGAACAGGGGACCAATACTGAAACT
GGCTAG
Protein sequenceShow/hide protein sequence
MPRYTDEPPAVRVYTICDESRSTPPLYLIVRNVPSLGCGDDLLKLFSSYGNVEDLNPLFSPLFYGSQRCKPMDAEECDDFTDVYFVKFHLVSNARFAKRKLDEFVFIGNR
LQVSYAPEFESLLDTKEKLEVRRREVLARSDSGRSRGSAVSSTATKFTNPSHSHYTLEQKNSHKKRLGMVRHFKDYREMIQEFLFHPSFRDKERFLWLVGVCAVLLGLWG
ERNDRVFRGLERSPSDVWTLTRFYVSLWASISKAFCSDDQYVSLVEGSDDQVGDLVISSEKGWREVATPWRNEHDALDVVLHPSVERRTFAASKCGEKNFWVTGEQNDDG
GDGNNTLISSGVGFNEKSNCWGHSIPIIFLQNGCGGLKKRNLLCGVQWISMGKGIVIKDLWKGNTWDLYFRRILFDRELEEWNSLASLIHSYNPTNREDVLTWRLDKTWM
FSVKSALEAIQLNRRFLKEDISVQIWEGSIPQKVKFSLWSTAHKSTNTMDRIKSSLQPLLGVPFIKLFDYFASVSMNQTVRLVREKLDKIQSTSELLQAGPVLVLRSNVF
CELHLYFGPYLNIKYEVSYQSGIRAFILGKTRAMSQCQIEERMSESEKSVEVLREKVPELERTVVEINKNIERLFISMEDQRLVTMETQKALTNLVTQKSCSEQGTNTET
G