; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034800 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034800
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAnkyrin repeat protein
Genome locationscaffold3:26300957..26307397
RNA-Seq ExpressionSpg034800
SyntenySpg034800
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.6e-2245.05Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDG----SVDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  NVDG    +V  Q  A+AP+ IAPVGL+T   K+ KA S+ L+I K           +IKG   + SN +E NL +G
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDG----SVDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDDIASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSGS
         NIA SHGGK+S KSKG V  S+GGKI   + +I++   SFG++IKKD+V SLGLK               GH+  K N     V +S+GG I++   GS
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDDIASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSGS

Query:  II
        ++
Subjt:  II

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]7.1e-2045.1Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAP-SIAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  NVDGS    V  Q  A+AP  IAPVGLETP  K +K  S   +I K           +IKG   V SN +E  L SG
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAP-SIAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDD--IASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSS
         NIA S+ GK+S KSK  V  S+GGKI   +  I++  ++  FG+EIKKD+V SLG+K+    KG+     S G K +K       V +SHGG I++   
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDD--IASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSS

Query:  GSII
        GS++
Subjt:  GSII

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]3.4e-3046.49Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGSV--DIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSGSN
        V+LDLNH FSF  FGW RIGT  N DGS+   + + A+AP+ IAPVGL+TP  K +K S+FGLEI K                 VV+S  +EINLKSG N
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGSV--DIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSGSN

Query:  IALSHGGKISPKSKG--RVISNGGKIGLKSIDDI---------------ASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLS
        IALSHGGKIS K KG   V  NGGK GLKS  ++                 SFG+EIKKD+V SLGLK +PK K                        +S
Subjt:  IALSHGGKISPKSKG--RVISNGGKIGLKSIDDI---------------ASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLS

Query:  HGGKINLKSSGSIISNGGNFGSKSNGNV
        HGG I++K  GSI+S GG  G KS+  V
Subjt:  HGGKINLKSSGSIISNGGNFGSKSNGNV

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]1.3e-2151.85Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  NVDGS    V+ Q  A+AP+ IAPVGLET   K++K  S+ L+I K           +IKG   V+S+ +E NL SG
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKI-GLK-SIDDIAS-SFGLEIKKDNVVSLGLKSSPKK
         NIA SHGGK+S KSKG V  S+GG+I GLK  I +    SFG+EIKKD+  +LGLK+   K
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKI-GLK-SIDDIAS-SFGLEIKKDNVVSLGLKSSPKK

TYK18189.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.1e-1636.32Show/hide
Query:  LDLNHQFSFH-AFGWHRIGTSNNVDGS-----VDIQSPAKAPS--IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDS---VVLSNGNEIN
        L +N  +SFH   G   +G  +N  GS     VDI+SP +AP+  IAP GLET                           P IK        +S  ++I+
Subjt:  LDLNHQFSFH-AFGWHRIGTSNNVDGS-----VDIQSPAKAPS--IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDS---VVLSNGNEIN

Query:  LKSGSNIALSHGGKISPKSKGRVISNGGKIGLKSIDDI--------------ASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRV
         KSGSNIALS GG         V+S+GG+IG+KS  +               A SFG+EI+K+NV SLGLK+  +K                       V
Subjt:  LKSGSNIALSHGGKISPKSKGRVISNGGKIGLKSIDDI--------------ASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRV

Query:  SLSHGGKINLKSSGSIISNGGNFGSKSNGNVVGA
         +SHGG I++K SGSI+SN G FG KSN NVV +
Subjt:  SLSHGGKINLKSSGSIISNGGNFGSKSNGNVVGA

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein1.6e-3046.49Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGSV--DIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSGSN
        V+LDLNH FSF  FGW RIGT  N DGS+   + + A+AP+ IAPVGL+TP  K +K S+FGLEI K                 VV+S  +EINLKSG N
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGSV--DIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSGSN

Query:  IALSHGGKISPKSKG--RVISNGGKIGLKSIDDI---------------ASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLS
        IALSHGGKIS K KG   V  NGGK GLKS  ++                 SFG+EIKKD+V SLGLK +PK K                        +S
Subjt:  IALSHGGKISPKSKG--RVISNGGKIGLKSIDDI---------------ASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLS

Query:  HGGKINLKSSGSIISNGGNFGSKSNGNV
        HGG I++K  GSI+S GG  G KS+  V
Subjt:  HGGKINLKSSGSIISNGGNFGSKSNGNV

A0A0A0K7W7 Uncharacterized protein7.4e-2346.31Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  +VDGS    V  Q  A+AP+ IAPVGLET   K++K  S+ L+I K           +IKG   V+S+ +E NL SG
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKI-GLK-SIDDIAS-SFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSG
         NIA SHGGK+S KSKG V  S+GG+I GLK  I +    SFG+EIKKD+  +LGLK+    KG V                   V +SHGG I++   G
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKI-GLK-SIDDIAS-SFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSG

Query:  SII
        SI+
Subjt:  SII

A0A0A0KAZ8 Uncharacterized protein2.5e-2347.03Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  NVDGS    V+ Q  A+AP+ IAPVGLET   K++K  S+ L+I K           +IKG   V+S+ +E NL SG
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKI-GLK-SIDDIAS-SFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSG
         NIA SHGGK+S KSKG V  S+GG+I GLK  I +    SFG+EIKKD+  +LGLK+    KG V                   V +SHGG I++   G
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKI-GLK-SIDDIAS-SFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSG

Query:  SI
        SI
Subjt:  SI

A0A5A7U057 Ankyrin repeat protein1.3e-2245.05Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDG----SVDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  NVDG    +V  Q  A+AP+ IAPVGL+T   K+ KA S+ L+I K           +IKG   + SN +E NL +G
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDG----SVDIQSPAKAPS-IAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDDIASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSGS
         NIA SHGGK+S KSKG V  S+GGKI   + +I++   SFG++IKKD+V SLGLK               GH+  K N     V +S+GG I++   GS
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDDIASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSGS

Query:  II
        ++
Subjt:  II

A0A5A7U318 Ankyrin repeat protein3.4e-2045.1Show/hide
Query:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAP-SIAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG
        V+  LNHQFSF AFGW  IGT  NVDGS    V  Q  A+AP  IAPVGLETP  K +K  S   +I K           +IKG   V SN +E  L SG
Subjt:  VDLDLNHQFSFHAFGWHRIGTSNNVDGS----VDIQSPAKAP-SIAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSG

Query:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDD--IASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSS
         NIA S+ GK+S KSK  V  S+GGKI   +  I++  ++  FG+EIKKD+V SLG+K+    KG+     S G K +K       V +SHGG I++   
Subjt:  SNIALSHGGKISPKSKGRVI-SNGGKIG--LKSIDD--IASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSS

Query:  GSII
        GS++
Subjt:  GSII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTGGTCAAGTCGAGTTGATCTCGACCTCAATCATCAGTTTTCTTTCCACGCTTTTGGATGGCATCGGATTGGAACCTCGAATAATGTCGATGGTAGCGTAGACAT
CCAAAGTCCTGCGAAAGCACCAAGTATTGCCCCTGTTGGGCTTGAAACTCCAAGGTGGAAAGACAACAAAGCTTCTTCTTTTGGGCTCGAAATTAAAAAGAGCAGTGCAG
TGTCTCTTGATCTCGAAACTCCAAAGATCAAGGGCGACAGTGTCGTTCTTTCTAATGGTAATGAAATCAATTTGAAGAGTGGCAGCAACATTGCTCTTTCTCATGGTGGA
AAAATTAGTCCGAAGAGCAAAGGTCGCGTCATTTCAAATGGTGGAAAAATTGGTTTGAAGAGCATCGACGACATTGCTTCGTCTTTTGGTCTCGAAATTAAGAAGGACAA
CGTTGTTTCTCTTGGTCTCAAAAGTAGTCCCAAGAAAAAGGGCAGTGTTATTGTTGTGGATTCTCAGGGTCACAAAATGAATAAAAAGAATGGCATTGGCAACCGTGTTT
CTCTTTCTCATGGTGGAAAAATCAATCTGAAGAGCAGCGGTAGCATTATTTCAAATGGTGGAAATTTTGGCTCGAAGAGTAATGGCAACGTTGTTGGGGCCGTTTGGTGT
GCCGGAATTGAATGGGTTTGGAATGGAATGGAATGGAATCTGATGCCCATGGGAATGTTTTGTTGGAATGTGGATTCCTGGGAATGCAGATGCCTGTGTTTGGTTTGCTG
GATTTGGGCTGGAATCAACCTGATGCCTGTGTTTGGTTCACTGGATTTGGGCTGGAATCATGCTGATGCCTGTGTTTGGAGTGCAAGGGAATGGGTTGGCATCCACAAGG
GAATGGGCTGGAATCCCATTCCAAACCCATTGGAATCCAGCCAATTCCAAACCCATCTCATTTCAGGGCTCCCAAACATGGTGATCCATTTCCATTCCAATCCAATCCAA
TCCAAACCCATGAAACAAACAGCTCTTAGGCCCAAGGGTTTGGAATGGTTTGGAATGGATTGGAAAGGGATGCCCATGTTTGGTTGTCCTGGAATGATGTGGTTAGTACT
AAGTAGCGACAGTGTTATTGTTGCTCATGGTGGCAAGGCTGGTCTGAACAGTGGCGGAGGCAGTGTTGTTGTTTCTAGTGCTCGTGAAATGAGTGTGAAGAGTAGCAGCA
ATGCTGTTGTTTCTCATGGTCATAAAGCTACTAAGAATAGTGGTGATGCTCTTGTATCTCATGGCCTTGAAGCTACTAAGAGCGGTAGTGGTAGCGTTTTCGTTTCTCAT
AATATGGAAGCCACAAAGAGCAGCGTCAGCGCTGATGTTTCTCATGGTCATGGCACTACCAAGAAAAGTGGCGTCGCTTTGTTTTCTCATGGTGTCCAAACTACCTCAAG
CCATAGCAACTCTTTTGTTTCTCACGGAGGTTTTGCTGTTCTACATCACCAAGCTCAACCTGTATTGCCTAATGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTGGTCAAGTCGAGTTGATCTCGACCTCAATCATCAGTTTTCTTTCCACGCTTTTGGATGGCATCGGATTGGAACCTCGAATAATGTCGATGGTAGCGTAGACAT
CCAAAGTCCTGCGAAAGCACCAAGTATTGCCCCTGTTGGGCTTGAAACTCCAAGGTGGAAAGACAACAAAGCTTCTTCTTTTGGGCTCGAAATTAAAAAGAGCAGTGCAG
TGTCTCTTGATCTCGAAACTCCAAAGATCAAGGGCGACAGTGTCGTTCTTTCTAATGGTAATGAAATCAATTTGAAGAGTGGCAGCAACATTGCTCTTTCTCATGGTGGA
AAAATTAGTCCGAAGAGCAAAGGTCGCGTCATTTCAAATGGTGGAAAAATTGGTTTGAAGAGCATCGACGACATTGCTTCGTCTTTTGGTCTCGAAATTAAGAAGGACAA
CGTTGTTTCTCTTGGTCTCAAAAGTAGTCCCAAGAAAAAGGGCAGTGTTATTGTTGTGGATTCTCAGGGTCACAAAATGAATAAAAAGAATGGCATTGGCAACCGTGTTT
CTCTTTCTCATGGTGGAAAAATCAATCTGAAGAGCAGCGGTAGCATTATTTCAAATGGTGGAAATTTTGGCTCGAAGAGTAATGGCAACGTTGTTGGGGCCGTTTGGTGT
GCCGGAATTGAATGGGTTTGGAATGGAATGGAATGGAATCTGATGCCCATGGGAATGTTTTGTTGGAATGTGGATTCCTGGGAATGCAGATGCCTGTGTTTGGTTTGCTG
GATTTGGGCTGGAATCAACCTGATGCCTGTGTTTGGTTCACTGGATTTGGGCTGGAATCATGCTGATGCCTGTGTTTGGAGTGCAAGGGAATGGGTTGGCATCCACAAGG
GAATGGGCTGGAATCCCATTCCAAACCCATTGGAATCCAGCCAATTCCAAACCCATCTCATTTCAGGGCTCCCAAACATGGTGATCCATTTCCATTCCAATCCAATCCAA
TCCAAACCCATGAAACAAACAGCTCTTAGGCCCAAGGGTTTGGAATGGTTTGGAATGGATTGGAAAGGGATGCCCATGTTTGGTTGTCCTGGAATGATGTGGTTAGTACT
AAGTAGCGACAGTGTTATTGTTGCTCATGGTGGCAAGGCTGGTCTGAACAGTGGCGGAGGCAGTGTTGTTGTTTCTAGTGCTCGTGAAATGAGTGTGAAGAGTAGCAGCA
ATGCTGTTGTTTCTCATGGTCATAAAGCTACTAAGAATAGTGGTGATGCTCTTGTATCTCATGGCCTTGAAGCTACTAAGAGCGGTAGTGGTAGCGTTTTCGTTTCTCAT
AATATGGAAGCCACAAAGAGCAGCGTCAGCGCTGATGTTTCTCATGGTCATGGCACTACCAAGAAAAGTGGCGTCGCTTTGTTTTCTCATGGTGTCCAAACTACCTCAAG
CCATAGCAACTCTTTTGTTTCTCACGGAGGTTTTGCTGTTCTACATCACCAAGCTCAACCTGTATTGCCTAATGCCTAA
Protein sequenceShow/hide protein sequence
MFWSSRVDLDLNHQFSFHAFGWHRIGTSNNVDGSVDIQSPAKAPSIAPVGLETPRWKDNKASSFGLEIKKSSAVSLDLETPKIKGDSVVLSNGNEINLKSGSNIALSHGG
KISPKSKGRVISNGGKIGLKSIDDIASSFGLEIKKDNVVSLGLKSSPKKKGSVIVVDSQGHKMNKKNGIGNRVSLSHGGKINLKSSGSIISNGGNFGSKSNGNVVGAVWC
AGIEWVWNGMEWNLMPMGMFCWNVDSWECRCLCLVCWIWAGINLMPVFGSLDLGWNHADACVWSAREWVGIHKGMGWNPIPNPLESSQFQTHLISGLPNMVIHFHSNPIQ
SKPMKQTALRPKGLEWFGMDWKGMPMFGCPGMMWLVLSSDSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSSSNAVVSHGHKATKNSGDALVSHGLEATKSGSGSVFVSH
NMEATKSSVSADVSHGHGTTKKSGVALFSHGVQTTSSHSNSFVSHGGFAVLHHQAQPVLPNA