CuGenDBv2

Gene ID	Spg034818
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ran-binding protein 1 homolog a-like
Genome location	scaffold3:24035594..24037627
RNA-Seq Expression	Spg034818
Synteny	Spg034818
Gene Ontology terms	GO:0016310 - phosphorylation (biological process) GO:0046907 - intracellular transport (biological process) GO:0000166 - nucleotide binding (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE9463632.1 hypothetical protein C3L33_04482, partial [Rhododendron williamsianum]

1.8e-08

67.24

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYAFSLSPLH
        ++TD + R+ EEA AGEDEDT AQVAP+VKL+EVAVTT EE ED+IL LY+ SLS  H
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYAFSLSPLH

XP_022964855.1 ran-binding protein 1 homolog a-like [Cucurbita moschata]

2.3e-08

76.47

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA
        +S D+ERR+ EEAPAGEDEDT AQVAPIVKLEEV VTT EENED++L L A
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA

XP_022970594.1 ran-binding protein 1 homolog a-like [Cucurbita maxima]

2.3e-08

76.47

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA
        +S D+ERR+ EEAPAGEDEDT AQVAPIVKLEEV VTT EENED++L L A
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA

XP_023519268.1 ran-binding protein 1 homolog a-like [Cucurbita pepo subsp. pepo]

2.3e-08

76.47

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA
        +S D+ERR+ EEAPAGEDEDT AQVAPIVKLEEV VTT EENED++L L A
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA

XP_038894876.1 ran-binding protein 1 homolog a [Benincasa hispida]

4.6e-09

83.67

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Query:  SSTDTERR-NEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        +STDTERR  EEAPAGEDEDT AQVAPIVKLEEV VTT EENED+IL L
Subjt:  SSTDTERR-NEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

TrEMBL top hits

e value

%identity

Alignment

A0A6A4M2K0 RanBD1 domain-containing protein (Fragment)

8.5e-09

67.24

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYAFSLSPLH
        ++TD + R+ EEA AGEDEDT AQVAP+VKL+EVAVTT EE ED+IL LY+ SLS  H
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYAFSLSPLH

A0A6J1HKC3 ran-binding protein 1 homolog a-like

1.5e-08

81.63

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Query:  SSTDTERR-NEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        +S DTERR  EEAPA EDEDT AQVAPIVKLEEVAVTT EENED+IL L
Subjt:  SSTDTERR-NEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

A0A6J1HM04 ran-binding protein 1 homolog a-like

1.1e-08

76.47

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA
        +S D+ERR+ EEAPAGEDEDT AQVAPIVKLEEV VTT EENED++L L A
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA

A0A6J1I4C6 ran-binding protein 1 homolog a-like

1.5e-08

81.63

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Query:  SSTDTERR-NEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        +S DTERR  EEAPA EDEDT AQVAPIVKLEEVAVTT EENED+IL L
Subjt:  SSTDTERR-NEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

A0A6J1I618 ran-binding protein 1 homolog a-like

1.1e-08

76.47

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Query:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA
        +S D+ERR+ EEAPAGEDEDT AQVAPIVKLEEV VTT EENED++L L A
Subjt:  SSTDTERRN-EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYA

SwissProt top hits

e value

%identity

Alignment

P92985 Ran-binding protein 1 homolog c

2.6e-07

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Query:  SSTDTERRN--EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        +ST+ ER N  +E    EDEDT AQVAPIV+LEEVAVTT EE+ED++L L
Subjt:  SSTDTERRN--EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

Q8RWG8 Ran-binding protein 1 homolog b

2.0e-07

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Query:  STDTERRN---EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        S + ER N   EE  A EDEDT AQVAPIV+LEEVAVTT EE+ED+IL L
Subjt:  STDTERRN---EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

Q9LMK7 Ran-binding protein 1 homolog a

1.5e-07

73.81

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Query:  RRNEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        R  EEA A EDEDT AQVAPIV+LEEVAVTT EE+ED++L L
Subjt:  RRNEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

Arabidopsis top hits

e value

%identity

Alignment

AT1G07140.1 Pleckstrin homology (PH) domain superfamily protein

1.1e-08

73.81

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Query:  RRNEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        R  EEA A EDEDT AQVAPIV+LEEVAVTT EE+ED++L L
Subjt:  RRNEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

AT2G30060.1 Pleckstrin homology (PH) domain superfamily protein

1.4e-08

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Query:  STDTERRN---EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        S + ER N   EE  A EDEDT AQVAPIV+LEEVAVTT EE+ED+IL L
Subjt:  STDTERRN---EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

AT5G58590.1 RAN binding protein 1

1.9e-08

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Query:  SSTDTERRN--EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL
        +ST+ ER N  +E    EDEDT AQVAPIV+LEEVAVTT EE+ED++L L
Subjt:  SSTDTERRN--EEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYL

Sequences

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CDS sequence

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ATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGGCTGGGGACATGACAACACAAGAAGGAATTCACTCCTTCCCAC
ATCTAGGAGAAGTCCATTAGGTCCCCCTGCTAGCTCCACCGATACCGAACGCCGAAACGAGGAGGCTCCTGCTGGAGAGGATGAAGACACTGCAGCTCAAGTCGCCCCAA
TCGTCAAGTTGGAAGAGGTTGCCGTCACCACCGACGAAGAAAACGAAGACTCTATTCTCTATCTGTATGCCTTTTCTCTTTCCCCTCTTCATCTGATCTGCTCAATCTAG

mRNA sequence

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Protein sequence

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MGESGQYADSICLPFWGQDRVGGWGHDNTRRNSLLPTSRRSPLGPPASSTDTERRNEEAPAGEDEDTAAQVAPIVKLEEVAVTTDEENEDSILYLYAFSLSPLHLICSI

Spg034818 (gene) of Sponge gourd (cylindrica) v1 genome