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Spg034827 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034827
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:24293036..24298623
RNA-Seq ExpressionSpg034827
SyntenySpg034827
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036865.1 uncharacterized protein E6C27_scaffold20G001750 [Cucumis melo var. makuwa]6.6e-0646.58Show/hide
Query:  VLPLKLHLVPKV------PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVL
        +L  K H  P++      PT  L+NNWF V P+NL P G  +   P V   +S LKG T LLS  WVGVN VL
Subjt:  VLPLKLHLVPKV------PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVL

KAA0037579.1 hypothetical protein E6C27_scaffold277G002120 [Cucumis melo var. makuwa]1.5e-0547.06Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLIP
        PT  L+NNWF V P+N  P       +P V   +S LKG T LLS  WVGVNSVL    L+ +H ++P
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLIP

KAA0038227.1 hypothetical protein E6C27_scaffold270G00670 [Cucumis melo var. makuwa]1.0e-0652Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL
        PT  L+NNWF V P+NL P        P V   +S LKG T LLS  WVGVNSVL    L SYL GL  ++ GLL
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL

KAA0045295.1 hypothetical protein E6C27_scaffold316G00550 [Cucumis melo var. makuwa]1.5e-0549.25Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLI
        PT  L+NNWF V P+NL P        PFV   +S LKG T LLS  WVGVNSVL    L+ +H ++
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLI

TYK30622.1 hypothetical protein E5676_scaffold84664G00370 [Cucumis melo var. makuwa]1.0e-0652Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL
        PT  L+NNWF V P+NL P        P V   +S LKG T LLS  WVGVNSVL    L SYL GL  ++ GLL
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL

TrEMBL top hitse value%identityAlignment
A0A5A7T8F7 Uncharacterized protein7.1e-0647.06Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLIP
        PT  L+NNWF V P+N  P       +P V   +S LKG T LLS  WVGVNSVL    L+ +H ++P
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLIP

A0A5A7T9D5 Uncharacterized protein5.0e-0752Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL
        PT  L+NNWF V P+NL P        P V   +S LKG T LLS  WVGVNSVL    L SYL GL  ++ GLL
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL

A0A5A7TV85 Uncharacterized protein7.1e-0649.25Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLI
        PT  L+NNWF V P+NL P        PFV   +S LKG T LLS  WVGVNSVL    L+ +H ++
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLI

A0A5D3B9X4 Uncharacterized protein3.2e-0646.58Show/hide
Query:  VLPLKLHLVPKV------PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVL
        +L  K H  P++      PT  L+NNWF V P+NL P G  +   P V   +S LKG T LLS  WVGVN VL
Subjt:  VLPLKLHLVPKV------PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVL

A0A5D3E3Z2 Uncharacterized protein5.0e-0752Show/hide
Query:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL
        PT  L+NNWF V P+NL P        P V   +S LKG T LLS  WVGVNSVL    L SYL GL  ++ GLL
Subjt:  PTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVL-SYLHGLIPKLVGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTTTTACCCCTAAAGTTACATCTTGTTCCTAAAGTCCCCACTAAGTCCCTAATGAACAATTGGTTTGTGGTCCCACCACTGAACCTAATACCTCTCGGGCCAAT
GAGAGGACGGGATCCCTTTGTTCACGTCCCAGAGTCAGCACTTAAGGGAAAAACCTCTCTACTATCCCTGAATTGGGTAGGAGTGAATTCCGTCTTGCAGGACTATGTCC
TCAGCTATCTACATGGTCTTATCCCCAAATTGGTAGGCCTATTAATTTCAAGCGAATTCGAGCACTTTCATTTGCCATCAGCAAGCTTTTGGGTTCAAAGTGGGCTTTTG
GTGACTGCAACTCGAACAGCCTTGGGATTGAATGCCCATAGGCTAGGAGTTTGGGCTCAATACGGATTCCGGACAGCACGTATTCAAGGAATTTACATGCTGATCGGCAA
ATTCCAGCAAGCTGTTGGTTCGCTTAGCGCAGTCTGTATCGTGGTTGTATTGACCTTATTTCCCTTTACCCCTCAACCAACAGATTATGCAGGTTACGAAGACTGTTACG
AACCCGGTGATGTAGAGGAGGAGGCTTATGAGAAAGGACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCGTTTTACCCCTAAAGTTACATCTTGTTCCTAAAGTCCCCACTAAGTCCCTAATGAACAATTGGTTTGTGGTCCCACCACTGAACCTAATACCTCTCGGGCCAAT
GAGAGGACGGGATCCCTTTGTTCACGTCCCAGAGTCAGCACTTAAGGGAAAAACCTCTCTACTATCCCTGAATTGGGTAGGAGTGAATTCCGTCTTGCAGGACTATGTCC
TCAGCTATCTACATGGTCTTATCCCCAAATTGGTAGGCCTATTAATTTCAAGCGAATTCGAGCACTTTCATTTGCCATCAGCAAGCTTTTGGGTTCAAAGTGGGCTTTTG
GTGACTGCAACTCGAACAGCCTTGGGATTGAATGCCCATAGGCTAGGAGTTTGGGCTCAATACGGATTCCGGACAGCACGTATTCAAGGAATTTACATGCTGATCGGCAA
ATTCCAGCAAGCTGTTGGTTCGCTTAGCGCAGTCTGTATCGTGGTTGTATTGACCTTATTTCCCTTTACCCCTCAACCAACAGATTATGCAGGTTACGAAGACTGTTACG
AACCCGGTGATGTAGAGGAGGAGGCTTATGAGAAAGGACCATAG
Protein sequenceShow/hide protein sequence
MFVLPLKLHLVPKVPTKSLMNNWFVVPPLNLIPLGPMRGRDPFVHVPESALKGKTSLLSLNWVGVNSVLQDYVLSYLHGLIPKLVGLLISSEFEHFHLPSASFWVQSGLL
VTATRTALGLNAHRLGVWAQYGFRTARIQGIYMLIGKFQQAVGSLSAVCIVVVLTLFPFTPQPTDYAGYEDCYEPGDVEEEAYEKGP