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Spg034839 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034839
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationscaffold3:27522187..27522947
RNA-Seq ExpressionSpg034839
SyntenySpg034839
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009753 - response to jasmonic acid (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588823.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2595Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RDHGGVYEAI GFDWSQEV+GLLAAFS
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

KAG7022587.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-2895.31Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RDHGGVYEAI GFDWSQEV+GLLAAFSGKSL
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL

XP_022927899.1 COP9 signalosome complex subunit 8-like [Cucurbita moschata]1.0e-2595Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RDHGGVYEAI GFDWSQEV+GLLAAFS
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

XP_022989724.1 COP9 signalosome complex subunit 8-like [Cucurbita maxima]2.0e-2491.67Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RD+GGVYEAI GFDW QEV+GLLAAFS
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

XP_023531250.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]4.0e-2593.33Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RDHGGVYEAI GFDW QEV+GLLAAFS
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

TrEMBL top hitse value%identityAlignment
A0A0A0KJG9 CSN8_PSD8_EIF3K domain-containing protein2.3e-2690.62Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL
        NSARFLWK+IPSTIKENRPELVA+WKIGQKLWVRDH GVYEAIH  DW QEVQGLLAAFSGKSL
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL

A0A6J1EJA8 COP9 signalosome complex subunit 8-like5.1e-2695Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RDHGGVYEAI GFDWSQEV+GLLAAFS
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

A0A6J1JQ49 COP9 signalosome complex subunit 8-like9.5e-2591.67Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        NSARFLWKAIPSTIKENRPELVAVWKIGQKLW+RD+GGVYEAI GFDW QEV+GLLAAFS
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

A0A7J6FGG7 CSN8_PSD8_EIF3K domain-containing protein3.6e-2481.25Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL
        NSARFLWK+IP+ IK+N+PEL+A WKIGQKLWVRD+GGV+EAI GFDWSQ+VQGL+AAFSGKSL
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL

A0A7J6FZS2 Uncharacterized protein3.6e-2481.25Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL
        NSARFLWK+IP+ IK+N+PEL+A WKIGQKLWVRD+GGV+EAI GFDWSQ+VQGL+AAFSGKSL
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL

SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 82.0e-1960Show/hide
Query:  VIGSFF----NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        ++G F+    +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI G+DWSQE + ++AAFS
Subjt:  VIGSFF----NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS

Q6GQA6 COP9 signalosome complex subunit 81.1e-1246.55Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA
        N+AR+LWK IPS IK +  EL  +W++GQK+W RD  G+Y +I  + WS+ +Q ++ A
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA

Q7ZUZ0 COP9 signalosome complex subunit 84.0e-1244.83Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA
        N+AR+LWK IP  IK   PE+ A+W +GQ++W RD  G+Y AI  + WS+ +  ++ A
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA

Q8VBV7 COP9 signalosome complex subunit 85.8e-1144.83Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA
        N+AR+LWK IP  IK    EL  +W +GQ++W RD  G+Y  I+   WS+ VQ ++ A
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA

Q99627 COP9 signalosome complex subunit 85.8e-1144.83Show/hide
Query:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA
        N+AR+LWK IP  IK    EL  +W +GQ++W RD  G+Y  I+   WS+ VQ ++ A
Subjt:  NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAA

Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN81.4e-2060Show/hide
Query:  VIGSFF----NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS
        ++G F+    +SARFLWK IP+ IKE +PE+VA W IGQKLW  D+ GVYEAI G+DWSQE + ++AAFS
Subjt:  VIGSFF----NSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATTCTCAACCAATTTAGGGCTAGTGTTACGTTGGAATTTGTTTCGAAATACATTGGTTTTCATTTGGTCATCGGCTCTTTTTTCAATAGTGCTCGATTTCTCTG
GAAAGCAATACCTTCCACTATAAAAGAGAACCGACCAGAACTTGTTGCAGTTTGGAAAATTGGCCAAAAGCTATGGGTTCGGGACCATGGGGGTGTTTATGAGGCTATTC
ATGGTTTTGATTGGTCCCAAGAAGTTCAAGGCCTATTAGCTGCATTTTCAGGCAAGTCTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATTCTCAACCAATTTAGGGCTAGTGTTACGTTGGAATTTGTTTCGAAATACATTGGTTTTCATTTGGTCATCGGCTCTTTTTTCAATAGTGCTCGATTTCTCTG
GAAAGCAATACCTTCCACTATAAAAGAGAACCGACCAGAACTTGTTGCAGTTTGGAAAATTGGCCAAAAGCTATGGGTTCGGGACCATGGGGGTGTTTATGAGGCTATTC
ATGGTTTTGATTGGTCCCAAGAAGTTCAAGGCCTATTAGCTGCATTTTCAGGCAAGTCTCTTTAA
Protein sequenceShow/hide protein sequence
MKILNQFRASVTLEFVSKYIGFHLVIGSFFNSARFLWKAIPSTIKENRPELVAVWKIGQKLWVRDHGGVYEAIHGFDWSQEVQGLLAAFSGKSL