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Spg034844 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034844
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAnkyrin repeat protein
Genome locationscaffold3:26649903..26655158
RNA-Seq ExpressionSpg034844
SyntenySpg034844
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]3.1e-1239.56Show/hide
Query:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL--DLQTPKSKG-
        V ATF D TGV + GLN QFSFR FG   +   NVD +I S V  Q   EAP  IAPV L+T ++    KA  + L+I       G +  D ++  + G 
Subjt:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL--DLQTPKSKG-

Query:  GIATSHGGKISLKSSDSV-----------VSNVGKIGLKSKGSVVSHDHEAT------KSSSNVVVCHGHKIGLKKRGSIAF
         IA SHGGK+S+KS  SV           +SN+   GL S G  +  DH A+      +   NV V +G  I + KRGS+ F
Subjt:  GIATSHGGKISLKSSDSV-----------VSNVGKIGLKSKGSVVSHDHEAT------KSSSNVVVCHGHKIGLKKRGSIAF

KAA0048677.1 Ankyrin repeat protein [Cucumis melo var. makuwa]5.4e-1236.79Show/hide
Query:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAP-EIAPVELETPMS---------------YNGHKALCFGLEIPHSSG--
        V ATF+D TGV + GLN QFSFR FG   +   NVD SI+S V  Q   EAP  IAPV LETP++                 G  A+    E   +SG  
Subjt:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAP-EIAPVELETPMS---------------YNGHKALCFGLEIPHSSG--

Query:  ----YLDLQTPKSKGGIATSHGGKIS---LKSSDSVVS----------NVGKIGLKSKGSVVSHDHEATKSSSNVVVCHGHKIGLKKRGSIAF
            Y+   + KSK  +A S GGKI+    K ++  +S          +V  +G+K+     S   +A K   NV V HG  I + KRGS+ F
Subjt:  ----YLDLQTPKSKGGIATSHGGKIS---LKSSDSVVS----------NVGKIGLKSKGSVVSHDHEATKSSSNVVVCHGHKIGLKKRGSIAF

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.2e-1138.95Show/hide
Query:  VVVSATFNDVTGVHDLGLNQQFSFR-TFGSHGLRIL-NVDSSIVSN-VDMQSPTEA--PEIAPVELET-PMSYNGHKALCFGLEIPHSSGYLDLQTPKSK
        V V ATF+DVTG+  LG++ ++SFR T GS G+ +  N   S  S+ VD +SPT+A  P+IAP  LET P   N H  + F +   H   +      KS 
Subjt:  VVVSATFNDVTGVHDLGLNQQFSFR-TFGSHGLRIL-NVDSSIVSN-VDMQSPTEA--PEIAPVELET-PMSYNGHKALCFGLEIPHSSGYLDLQTPKSK

Query:  GGIATSHGGKISLKSSDSVVSNVGKIGLKSKGS--VVSHDHEATKSSSNVVVCHGHKI--------GLK---KRGSIAFSHGGKISLKSR
          IA S GG         +V+N GKIG+KS  S   VSH  E + S +N  +  G +I        GLK   ++  +  SHGG IS+K R
Subjt:  GGIATSHGGKISLKSSDSVVSNVGKIGLKSKGS--VVSHDHEATKSSSNVVVCHGHKI--------GLK---KRGSIAFSHGGKISLKSR

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]2.7e-1945.85Show/hide
Query:  ATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI--PHSSGYLDLQ----TPKSKGGI
        ATFNDVTGV +L LN  FSFR FG   +   N D S+ S V+  +  EAP  IAPV L+TP++  G K   FGLEI     SG +  +      KS G I
Subjt:  ATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI--PHSSGYLDLQ----TPKSKGGI

Query:  ATSHGGKISLKSSD--SVVSNVGKIGLKSKGSV-VSH---------------------DH------EATKSSSNVVVCHGHKIGLKKRGSIAFSHGGKIS
        A SHGGKISLK     SV  N GK GLKS G+V VSH                     DH      +A K   N  V HG  I +KKRGSI  S GGKI 
Subjt:  ATSHGGKISLKSSD--SVVSNVGKIGLKSKGSV-VSH---------------------DH------EATKSSSNVVVCHGHKIGLKKRGSIAFSHGGKIS

Query:  LKSRA
        LKS A
Subjt:  LKSRA

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]1.8e-1238.32Show/hide
Query:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEIPHSSGYLDLQTPKSKGGIATSH
        V ATF+D TGV + GLN QFSFR FG   +   NVD SI S V+ Q   EAP  IAPV LET M     K   + L+I            + KGG     
Subjt:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEIPHSSGYLDLQTPKSKGGIATSH

Query:  GGKISLKSSDSVVSNVGKIGLKSKGSVVSHDHEAT-KSSSNVVVCHGHKIGLKKRGSIAFSHGGKIS
                                G+VVSHDHE+   S  N+   HG K+ +K +GS+A S GG+I+
Subjt:  GGKISLKSSDSVVSNVGKIGLKSKGSVVSHDHEAT-KSSSNVVVCHGHKIGLKKRGSIAFSHGGKIS

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein6.8e-2145.97Show/hide
Query:  HNVVVSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI--PHSSGYLDLQ----TP
        H V V ATFNDVTGV +L LN  FSFR FG   +   N D S+ S V+  +  EAP  IAPV L+TP++  G K   FGLEI     SG +  +      
Subjt:  HNVVVSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI--PHSSGYLDLQ----TP

Query:  KSKGGIATSHGGKISLKSSD--SVVSNVGKIGLKSKGSV-VSH---------------------DH------EATKSSSNVVVCHGHKIGLKKRGSIAFS
        KS G IA SHGGKISLK     SV  N GK GLKS G+V VSH                     DH      +A K   N  V HG  I +KKRGSI  S
Subjt:  KSKGGIATSHGGKISLKSSD--SVVSNVGKIGLKSKGSV-VSH---------------------DH------EATKSSSNVVVCHGHKIGLKKRGSIAFS

Query:  HGGKISLKSRA
         GGKI LKS A
Subjt:  HGGKISLKSRA

A0A0A0K7W7 Uncharacterized protein3.1e-1343.09Show/hide
Query:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL---DLQTPKSKG
        V ATF+D TGV + GLN QFSFR FG   +   +VD SI S V  Q   EAP  IAPV LET M     K   + L+I       G +   D ++  + G
Subjt:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL---DLQTPKSKG

Query:  -GIATSHGGKISLKSSDSVV-SNVGKI-GLKSK---------GSVVSHDHEAT------KSSSNVVVCHGHKIGLKKRGSI
          IA SHGGK+S+KS  SV  S+ G+I GLK K         G  +  DH AT      K   NV V HG  I + KRGSI
Subjt:  -GIATSHGGKISLKSSDSVV-SNVGKI-GLKSK---------GSVVSHDHEAT------KSSSNVVVCHGHKIGLKKRGSI

A0A0A0KAZ8 Uncharacterized protein2.1e-1441.3Show/hide
Query:  VVVSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL---DLQTPKS
        V+ SATF+D TGV + GLN QFSFR FG   +   NVD SI S V+ Q   EAP  IAPV LET M     K   + L+I       G +   D ++  +
Subjt:  VVVSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL---DLQTPKS

Query:  KG-GIATSHGGKISLKSSDSVV-SNVGKI-GLKSKGSVVSHDHEATKSSSNVVVCHGHKIGLKK---RGSIAFSHGGKISLKSR
         G  IA SHGGK+S+KS  SV  S+ G+I GLK K     H+++       +   HG  +GLK    + ++  SHGG IS+  R
Subjt:  KG-GIATSHGGKISLKSSDSVV-SNVGKI-GLKSKGSVVSHDHEATKSSSNVVVCHGHKIGLKK---RGSIAFSHGGKISLKSR

A0A5A7U057 Ankyrin repeat protein1.5e-1239.56Show/hide
Query:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL--DLQTPKSKG-
        V ATF D TGV + GLN QFSFR FG   +   NVD +I S V  Q   EAP  IAPV L+T ++    KA  + L+I       G +  D ++  + G 
Subjt:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPE-IAPVELETPMSYNGHKALCFGLEI---PHSSGYL--DLQTPKSKG-

Query:  GIATSHGGKISLKSSDSV-----------VSNVGKIGLKSKGSVVSHDHEAT------KSSSNVVVCHGHKIGLKKRGSIAF
         IA SHGGK+S+KS  SV           +SN+   GL S G  +  DH A+      +   NV V +G  I + KRGS+ F
Subjt:  GIATSHGGKISLKSSDSV-----------VSNVGKIGLKSKGSVVSHDHEAT------KSSSNVVVCHGHKIGLKKRGSIAF

A0A5A7U318 Ankyrin repeat protein2.6e-1236.79Show/hide
Query:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAP-EIAPVELETPMS---------------YNGHKALCFGLEIPHSSG--
        V ATF+D TGV + GLN QFSFR FG   +   NVD SI+S V  Q   EAP  IAPV LETP++                 G  A+    E   +SG  
Subjt:  VSATFNDVTGVHDLGLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAP-EIAPVELETPMS---------------YNGHKALCFGLEIPHSSG--

Query:  ----YLDLQTPKSKGGIATSHGGKIS---LKSSDSVVS----------NVGKIGLKSKGSVVSHDHEATKSSSNVVVCHGHKIGLKKRGSIAF
            Y+   + KSK  +A S GGKI+    K ++  +S          +V  +G+K+     S   +A K   NV V HG  I + KRGS+ F
Subjt:  ----YLDLQTPKSKGGIATSHGGKIS---LKSSDSVVS----------NVGKIGLKSKGSVVSHDHEATKSSSNVVVCHGHKIGLKKRGSIAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGTTGGACTGCTCAAAACTCGAAGAAAAAGAGATCGCCACTAGTGCCTTACCAGAACTCACGCATACACGCCGAAGGAGGAGATCCCAGTTGTTGCCGCTACGTGC
GCCGGTGGCTGGAGAAGCTGTGGCGTCAACAATGGCCACAAGGGCTGGAGAAGGTGAGAGAGAGAGAGAGGTGACGACGGCGCTTGTCAGGCAGAGATCCGATCCGAGAC
AGCGGAGGGAGGGAGGTGACAACAGCACGAGAGTCGATAATGGCATTGTATCAAATGTCGACATCCAGAGTTCTACAGAAGCCCAAACACTTGCTCCTATTGGACTTGAA
ACTCCAATGAGTAGTGGCAATAACACAGATTTGTCTTTTGGCCATGAAATTGAGAAGAGTAGTGATGCGACTCTTGGTCTTGGAACTCCAAAGATCATGGGCGGCATTTT
TTTTTTCTTATGTAGTGGTGAGATTGGAATTACAAATAACAGTAACAAAGATTTGTCGTTTGATCTGAAAATCAAGAAGAGTAATGATGCATCTCTTGATCTTGAACCTC
CCAAGAGCAAGGGAAATGTTGTTATTTCACATGGTTTTGGCACTAGAAAGAGCAATCACAACGTGGTTGTAAGTGCCACTTTCAACGATGTCACTGGTGTTCACGATCTT
GGCCTCAATCAACAATTTTCCTTTCGGACATTTGGATCACATGGTTTAAGGATCCTGAATGTCGACAGTAGTATCGTGTCAAATGTAGACATGCAAAGTCCCACAGAAGC
ACCGGAGATTGCCCCAGTTGAACTTGAAACTCCAATGAGTTATAATGGCCATAAAGCTTTGTGTTTTGGTCTCGAAATTCCGCACAGCAGCGGATACCTTGATCTCCAAA
CTCCAAAAAGCAAGGGTGGCATTGCTACTTCCCACGGTGGAAAAATTAGTTTGAAGAGCAGTGATAGTGTTGTTTCTAATGTTGGCAAAATTGGCTTGAAGAGCAAAGGT
AGTGTTGTTTCTCATGACCATGAAGCTACAAAGAGCAGCAGCAACGTTGTTGTTTGTCATGGTCATAAAATTGGTCTAAAGAAGAGAGGCAGCATAGCTTTTTCTCATGG
TGGTAAAATTAGTTTAAAGAGTAGAGCTGATGGTGTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGTTGGACTGCTCAAAACTCGAAGAAAAAGAGATCGCCACTAGTGCCTTACCAGAACTCACGCATACACGCCGAAGGAGGAGATCCCAGTTGTTGCCGCTACGTGC
GCCGGTGGCTGGAGAAGCTGTGGCGTCAACAATGGCCACAAGGGCTGGAGAAGGTGAGAGAGAGAGAGAGGTGACGACGGCGCTTGTCAGGCAGAGATCCGATCCGAGAC
AGCGGAGGGAGGGAGGTGACAACAGCACGAGAGTCGATAATGGCATTGTATCAAATGTCGACATCCAGAGTTCTACAGAAGCCCAAACACTTGCTCCTATTGGACTTGAA
ACTCCAATGAGTAGTGGCAATAACACAGATTTGTCTTTTGGCCATGAAATTGAGAAGAGTAGTGATGCGACTCTTGGTCTTGGAACTCCAAAGATCATGGGCGGCATTTT
TTTTTTCTTATGTAGTGGTGAGATTGGAATTACAAATAACAGTAACAAAGATTTGTCGTTTGATCTGAAAATCAAGAAGAGTAATGATGCATCTCTTGATCTTGAACCTC
CCAAGAGCAAGGGAAATGTTGTTATTTCACATGGTTTTGGCACTAGAAAGAGCAATCACAACGTGGTTGTAAGTGCCACTTTCAACGATGTCACTGGTGTTCACGATCTT
GGCCTCAATCAACAATTTTCCTTTCGGACATTTGGATCACATGGTTTAAGGATCCTGAATGTCGACAGTAGTATCGTGTCAAATGTAGACATGCAAAGTCCCACAGAAGC
ACCGGAGATTGCCCCAGTTGAACTTGAAACTCCAATGAGTTATAATGGCCATAAAGCTTTGTGTTTTGGTCTCGAAATTCCGCACAGCAGCGGATACCTTGATCTCCAAA
CTCCAAAAAGCAAGGGTGGCATTGCTACTTCCCACGGTGGAAAAATTAGTTTGAAGAGCAGTGATAGTGTTGTTTCTAATGTTGGCAAAATTGGCTTGAAGAGCAAAGGT
AGTGTTGTTTCTCATGACCATGAAGCTACAAAGAGCAGCAGCAACGTTGTTGTTTGTCATGGTCATAAAATTGGTCTAAAGAAGAGAGGCAGCATAGCTTTTTCTCATGG
TGGTAAAATTAGTTTAAAGAGTAGAGCTGATGGTGTTGTTTAA
Protein sequenceShow/hide protein sequence
MLLDCSKLEEKEIATSALPELTHTRRRRRSQLLPLRAPVAGEAVASTMATRAGEGEREREVTTALVRQRSDPRQRREGGDNSTRVDNGIVSNVDIQSSTEAQTLAPIGLE
TPMSSGNNTDLSFGHEIEKSSDATLGLGTPKIMGGIFFFLCSGEIGITNNSNKDLSFDLKIKKSNDASLDLEPPKSKGNVVISHGFGTRKSNHNVVVSATFNDVTGVHDL
GLNQQFSFRTFGSHGLRILNVDSSIVSNVDMQSPTEAPEIAPVELETPMSYNGHKALCFGLEIPHSSGYLDLQTPKSKGGIATSHGGKISLKSSDSVVSNVGKIGLKSKG
SVVSHDHEATKSSSNVVVCHGHKIGLKKRGSIAFSHGGKISLKSRADGVV