; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034854 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034854
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiondof zinc finger protein DOF3.4-like
Genome locationscaffold3:25883657..25884274
RNA-Seq ExpressionSpg034854
SyntenySpg034854
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003851 - Zinc finger, Dof-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595058.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]7.7e-6885.71Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-------TA
        MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP       T+
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-------TA

Query:  VVSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM
        VVSSSSGSLTNSVS+LDHH LPATP LVPLVGGH GG+QF  GGGGELKAGGNM
Subjt:  VVSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM

XP_022963128.1 dof zinc finger protein DOF3.4-like [Cucurbita moschata]5.9e-6886.27Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAV
        MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP      T+V
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAV

Query:  VSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM
        VSSSSGSLTNSVS+LDHH LPATP LVPLVGGH GG+QF  GGGGELKAGGNM
Subjt:  VSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM

XP_023003604.1 dof zinc finger protein DOF3.4-like [Cucurbita maxima]1.0e-6786.18Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-----TAVV
        MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP     T+VV
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-----TAVV

Query:  SSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM
        SSSSGSLTNSVS+LDHH LPATP LVPLVGGH GG+QF  GGGGELKAGGN+
Subjt:  SSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM

XP_023518495.1 dof zinc finger protein DOF3.4-like [Cucurbita pepo subsp. pepo]3.8e-6785.06Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAV
        MPS+A DH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP      T+V
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAV

Query:  VSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF--CGGGGELKAGGNM
        VSSSSGSLTNSVS+LDHH LPATP LVPLVGGH GG+QF   GGGGELKAGGNM
Subjt:  VSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF--CGGGGELKAGGNM

XP_038883004.1 dof zinc finger protein DOF3.4-like [Benincasa hispida]2.7e-6084.89Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAY-PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP--TAVVSS
        MPS+AGDHRKTATKP GSGG+  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTC+P   AVVSS
Subjt:  MPSNAGDHRKTATKPLGSGGAY-PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP--TAVVSS

Query:  SSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGG
        SSGS TNSVSRLDHH LP TPVLVPL GG GG ++  GG
Subjt:  SSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGG

TrEMBL top hitse value%identityAlignment
A0A0A0KG50 Dof-type domain-containing protein1.2e-5882.86Show/hide
Query:  MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTA---VVS
        MPS+AGDHRK  TKPL SG G  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIPT+   V S
Subjt:  MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTA---VVS

Query:  SSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGG
        SSSGS +NSVSRLDHH LPATPVLVPL GG GG ++  GG
Subjt:  SSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGG

A0A1S3B0L0 dof zinc finger protein DOF3.42.3e-5780.71Show/hide
Query:  MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTA---VVS
        MPS+AGDHRK  TKPL SG G  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP +   V S
Subjt:  MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTA---VVS

Query:  SSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGG
        SSSGS +NS SR+DHH LPATPVLVPL GG GG ++  GG
Subjt:  SSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGG

A0A5D3CLU5 Dof zinc finger protein DOF3.42.3e-5779.19Show/hide
Query:  MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVV----
        MPS+AGDHRK  TKPL SG G  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP +      
Subjt:  MPSNAGDHRKTATKPLGSG-GAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVV----

Query:  SSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGGGGELKAGG
        SSSSGS +NSVSR+DHH LPATPVLVPL    GGGV     GGELK GG
Subjt:  SSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCGGGGELKAGG

A0A6J1HGU9 dof zinc finger protein DOF3.4-like2.9e-6886.27Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAV
        MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP      T+V
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP------TAV

Query:  VSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM
        VSSSSGSLTNSVS+LDHH LPATP LVPLVGGH GG+QF  GGGGELKAGGNM
Subjt:  VSSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM

A0A6J1KTT2 dof zinc finger protein DOF3.4-like4.9e-6886.18Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-----TAVV
        MPS+AGDH KTATKPL SGG  PPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGGGSRKNAKRSRTCIP     T+VV
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIP-----TAVV

Query:  SSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM
        SSSSGSLTNSVS+LDHH LPATP LVPLVGGH GG+QF  GGGGELKAGGN+
Subjt:  SSSSGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQF-CGGGGELKAGGNM

SwissProt top hitse value%identityAlignment
O82155 Dof zinc finger protein DOF1.71.7e-2563.33Show/hide
Query:  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNS--VSRLDHH
        PEQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CR YWT  G LR+IPVGGG+RK+ KRS         SS S +L N     + DHH
Subjt:  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNS--VSRLDHH

Q39088 Dof zinc finger protein DOF3.46.8e-3561.98Show/hide
Query:  SNAGDHRKTATKPLGSGGAYP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGS
        S++G+ R+ A KP  +G   P   +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR YWTH GTLRD+PVGGG+RK+AKRSRTC      +SSS S
Subjt:  SNAGDHRKTATKPLGSGGAYP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGS

Query:  LTNSVSRLDHHLLPATPVLVP
        ++  VS  +   L  TPVL P
Subjt:  LTNSVSRLDHHLLPATPVLVP

Q94AR6 Dof zinc finger protein DOF3.11.7e-2562.35Show/hide
Query:  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLD
        EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCR YWT  G LR++PVGGGSRKNA +  T   ++  S S+ S        D
Subjt:  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLD

Q9FGD6 Dof zinc finger protein DOF5.84.4e-3458.78Show/hide
Query:  MPSNAGDHRKTATKPLGSGG--AYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSS
        MPS   + R+    P G GG  A P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGG SRK++KRSRT          
Subjt:  MPSNAGDHRKTATKPLGSGG--AYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSS

Query:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGG
        S + T SV    +  L ATPVL P    +GG
Subjt:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGG

Q9SX97 Dof zinc finger protein DOF1.65.6e-2948.65Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRK-NAKRSRTCIPTAVVSSS
        MPS     R T  +P  S  AYPPP   E LPCPRC+ST TKFCYYNNYN +QPR++CKSCR YWT  GTLRD+PVGGG+R+ ++KR R+   TA  SSS
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRK-NAKRSRTCIPTAVVSSS

Query:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCG---GGGELKAG
        S S+  + ++       +   +  L+ GHG      G   G G L  G
Subjt:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCG---GGGELKAG

Arabidopsis top hitse value%identityAlignment
AT1G47655.1 Dof-type zinc finger DNA-binding family protein4.0e-3048.65Show/hide
Query:  MPSNAGDHRKTATKPLGSGGAYPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRK-NAKRSRTCIPTAVVSSS
        MPS     R T  +P  S  AYPPP   E LPCPRC+ST TKFCYYNNYN +QPR++CKSCR YWT  GTLRD+PVGGG+R+ ++KR R+   TA  SSS
Subjt:  MPSNAGDHRKTATKPLGSGGAYPPPE-QEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRK-NAKRSRTCIPTAVVSSS

Query:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCG---GGGELKAG
        S S+  + ++       +   +  L+ GHG      G   G G L  G
Subjt:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGGGVQFCG---GGGELKAG

AT1G51700.1 DOF zinc finger protein 11.2e-2663.33Show/hide
Query:  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNS--VSRLDHH
        PEQE L CPRCDS NTKFCYYNNYN SQPRHFCK+CR YWT  G LR+IPVGGG+RK+ KRS         SS S +L N     + DHH
Subjt:  PEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNS--VSRLDHH

AT3G21270.1 DOF zinc finger protein 21.2e-2662.35Show/hide
Query:  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLD
        EQE L CPRCDS NTKFCYYNNYN SQPRHFCKSCR YWT  G LR++PVGGGSRKNA +  T   ++  S S+ S        D
Subjt:  EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLD

AT3G50410.1 OBF binding protein 14.9e-3661.98Show/hide
Query:  SNAGDHRKTATKPLGSGGAYP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGS
        S++G+ R+ A KP  +G   P   +QE LPCPRCDS+NTKFCYYNNYNFSQPRHFCK+CR YWTH GTLRD+PVGGG+RK+AKRSRTC      +SSS S
Subjt:  SNAGDHRKTATKPLGSGGAYP-PPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGS

Query:  LTNSVSRLDHHLLPATPVLVP
        ++  VS  +   L  TPVL P
Subjt:  LTNSVSRLDHHLLPATPVLVP

AT5G66940.1 Dof-type zinc finger DNA-binding family protein3.1e-3558.78Show/hide
Query:  MPSNAGDHRKTATKPLGSGG--AYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSS
        MPS   + R+    P G GG  A P  +QE L CPRC+STNTKFCYYNNYNFSQPRHFCKSCR YWTH GTLRDIPVGG SRK++KRSRT          
Subjt:  MPSNAGDHRKTATKPLGSGG--AYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSS

Query:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGG
        S + T SV    +  L ATPVL P    +GG
Subjt:  SGSLTNSVSRLDHHLLPATPVLVPLVGGHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCCAATGCCGGCGACCACCGCAAGACCGCCACCAAGCCCCTCGGCTCTGGTGGGGCCTACCCTCCACCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTC
TACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCTGTTACTGGACCCACAGTGGGACCCTCCGGGACATTC
CCGTTGGCGGTGGAAGCAGGAAGAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCGGTTGTTTCTTCTTCGTCTGGGTCGTTGACTAATTCTGTTTCTCGGTTGGAT
CATCATCTATTGCCAGCGACTCCGGTGCTGGTGCCGCTCGTCGGTGGCCATGGTGGGGGAGTTCAGTTCTGCGGCGGTGGGGGGGAGTTGAAGGCCGGTGGGAATATGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCCAATGCCGGCGACCACCGCAAGACCGCCACCAAGCCCCTCGGCTCTGGTGGGGCCTACCCTCCACCGGAGCAAGAGCACCTTCCTTGCCCACGATGTGATTC
TACTAATACCAAGTTCTGTTACTACAATAACTATAATTTCTCTCAGCCCAGGCACTTTTGTAAGTCCTGTCGCTGTTACTGGACCCACAGTGGGACCCTCCGGGACATTC
CCGTTGGCGGTGGAAGCAGGAAGAATGCCAAGCGCTCTCGTACTTGCATTCCGACGGCGGTTGTTTCTTCTTCGTCTGGGTCGTTGACTAATTCTGTTTCTCGGTTGGAT
CATCATCTATTGCCAGCGACTCCGGTGCTGGTGCCGCTCGTCGGTGGCCATGGTGGGGGAGTTCAGTTCTGCGGCGGTGGGGGGGAGTTGAAGGCCGGTGGGAATATGTA
A
Protein sequenceShow/hide protein sequence
MPSNAGDHRKTATKPLGSGGAYPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRCYWTHSGTLRDIPVGGGSRKNAKRSRTCIPTAVVSSSSGSLTNSVSRLD
HHLLPATPVLVPLVGGHGGGVQFCGGGGELKAGGNM