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Spg034890 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034890
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnucleolar protein 58-like
Genome locationscaffold3:23913399..23915375
RNA-Seq ExpressionSpg034890
SyntenySpg034890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN01433.1 hypothetical protein CDL12_26059 [Handroanthus impetiginosus]6.6e-0533.01Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSVS
        R LL + I+   + DVGKII+D I          L+FP+ IT LC RAGV  +E + ++F +  ID   + R+        GG    +   +  L   +S
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSVS

Query:  RQE
         QE
Subjt:  RQE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-0444.87Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  L NE    L + G ID   +AR+  TQE
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]1.9e-0442.68Show/hide
Query:  VLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL-QRTQEARQG
        +LL +AIL   SI+VGKII  EI  C KKK    +FP+ IT LC +A V         + +G I   +L RL +R  E  QG
Subjt:  VLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL-QRTQEARQG

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]4.3e-0456Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGV
        R+LL +AIL   SI+VGKII  EI  C KKK G ++FP+ IT LC +A V
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGV

XP_016721754.1 nucleolar protein 58-like [Gossypium hirsutum]1.5e-0432.05Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        R+ L  +I++   IDVG I+  EIS C  +++G L FP+ + +LC++ G++  +G+ +L +K  I+   + R+ R ++
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE

TrEMBL top hitse value%identityAlignment
A0A1U8M891 nucleolar protein 58-like7.2e-0532.05Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        R+ L  +I++   IDVG I+  EIS C  +++G L FP+ + +LC++ G++  +G+ +L +K  I+   + R+ R ++
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE

A0A2G9G807 Uncharacterized protein3.2e-0533.01Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSVS
        R LL + I+   + DVGKII+D I          L+FP+ IT LC RAGV  +E + ++F +  ID   + R+        GG    +   +  L   +S
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSVS

Query:  RQE
         QE
Subjt:  RQE

A0A2P5DXM3 Uncharacterized protein5.5e-0544.87Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        R+LL  ++L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  L NE    L + G ID   +AR+  TQE
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQE

A0A5D2B8V0 Uncharacterized protein9.3e-0542.68Show/hide
Query:  VLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL-QRTQEARQG
        +LL +AIL   SI+VGKII  EI  C KKK    +FP+ IT LC +A V         + +G I   +L RL +R  E  QG
Subjt:  VLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARL-QRTQEARQG

A0A5D2MA47 Uncharacterized protein2.1e-0456Show/hide
Query:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGV
        R+LL +AIL   SI+VGKII  EI  C KKK G ++FP+ IT LC +A V
Subjt:  RVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGAATTATTACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCCGGTTGTTGGAAGAAGAAAGTGGG
GAAGCTGTTTTTCCCGAATACTATTACCATGCTTTGCAAGCGAGCAGGGGTTCTAGAGAATGAAGGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACT
TGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTGGTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGTCAGCAGGCAGGAGTTTGCCGAG
AGCTTGGACTGGCTAAGCTTAATTAGATCAAGCCTAGTTGGTGATAAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCGTGCTTAAGAGCTTATGACTG
TAGGGCTGCTTTAAGTCTGAAAAACAAAAATATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAA
TGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAAATCTGTGCTG
CAGCAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGAATTATTACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCCGGTTGTTGGAAGAAGAAAGTGGG
GAAGCTGTTTTTCCCGAATACTATTACCATGCTTTGCAAGCGAGCAGGGGTTCTAGAGAATGAAGGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACT
TGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTGGTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGTCAGCAGGCAGGAGTTTGCCGAG
AGCTTGGACTGGCTAAGCTTAATTAGATCAAGCCTAGTTGGTGATAAGTTTGAGGCAAGGGTATACTGCACCATAAAGTGGGTCATCCCGTGCTTAAGAGCTTATGACTG
TAGGGCTGCTTTAAGTCTGAAAAACAAAAATATAAACCCCTTGAAAATGTGTTTTGATATGTCTGATAATAGAGCTAAGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAA
TGGTGATTATTTGTCCATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAGTGCTCAGAATCTGTTGCTGGGCGACTTGAGGGAGCAAAATCTGTGCTG
CAGCAAAGCTGGGAGCAAAACTGCCACGTCACAGCTCGTTAG
Protein sequenceShow/hide protein sequence
KELLRVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSVSRQEFAE
SLDWLSLIRSSLVGDKFEARVYCTIKWVIPCLRAYDCRAALSLKNKNINPLKMCFDMSDNRAKLWQVLRIELKMVIICPCRKNYFAAAELGFAECSESVAGRLEGAKSVL
QQSWEQNCHVTAR