; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034891 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034891
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA polymerase epsilon subunit
Genome locationscaffold3:26969692..26982347
RNA-Seq ExpressionSpg034891
SyntenySpg034891
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0019752 - carboxylic acid metabolic process (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0016831 - carboxy-lyase activity (molecular function)
InterPro domainsIPR007185 - DNA polymerase alpha/delta/epsilon, subunit B
IPR016266 - DNA polymerase epsilon, subunit B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036041.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]5.8e-15172.22Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL+NAISFTG F+   ITTGLFTENTI+VAEGEMLVEGIFQV+TCGFPPLE+R
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGGVL KEET+                    LEK+AVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFV MGNFCS PCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        +AFNSFSSLRLQFG+LGKMIAAHPRL +HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

TYJ98844.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]9.6e-15472.73Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL+NAISFTG F+ HKITTGLFTENTI+VAEGEMLVEGIFQV+TCGFPPLE+R
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGGVL KEET+                    LEK+AVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFV MGNFCS PCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        +AFNSFSSLRLQFG+LGKMIAAHPRL +HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

XP_022949454.1 DNA polymerase epsilon subunit B [Cucurbita moschata]6.0e-14871.72Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHF+LED TASVEINL++A          KITTGLFTENTIVVAEGEMLVEGIF+VITCGFPPLEDR
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGG L+KEET+                    LEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVE+VPSLFV MGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        LAFNS+SSLRLQFG+LGKMIAA PRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

XP_023525784.1 DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo]2.1e-14871.97Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL++A          KITTGLFTENTIVVAEGEMLVEGIF+VITCGFPPLEDR
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGG L+KEET+                    LEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVE+VPSLFV MGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        LAFNS+SSLRLQFG+LGKMIAA PRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

XP_038894268.1 DNA polymerase epsilon subunit B [Benincasa hispida]4.6e-14871.72Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL+NA          KITTGLFTENTIVVAEGEMLVEGIFQV+TCGFPPLE+R
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGG LSKEET+                    LEK+AVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFV MGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        LAFNSFSSLRLQFG+LG+MIAAHPRL EHSKFLFIPGPDDAGPSTVLPRCALPK+LTEELQMHVPNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVL DRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

TrEMBL top hitse value%identityAlignment
A0A1S4DTQ5 DNA polymerase epsilon subunit4.2e-14770.71Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL+NA          KITTGLFTENTI+VAEGEMLVEGIFQV+TCGFPPLE+R
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGGVL KEET+                    LEK+AVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFV MGNFCS PCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        +AFNSFSSLRLQFG+LGKMIAAHPRL +HSKF FIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

A0A5A7T342 Glutamate decarboxylase2.8e-15172.22Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL+NAISFTG F+   ITTGLFTENTI+VAEGEMLVEGIFQV+TCGFPPLE+R
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGGVL KEET+                    LEK+AVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFV MGNFCS PCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        +AFNSFSSLRLQFG+LGKMIAAHPRL +HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

A0A5D3BIF9 Glutamate decarboxylase4.6e-15472.73Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL+NAISFTG F+ HKITTGLFTENTI+VAEGEMLVEGIFQV+TCGFPPLE+R
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGGVL KEET+                    LEK+AVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFV MGNFCS PCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        +AFNSFSSLRLQFG+LGKMIAAHPRL +HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQ+HVPNA FSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

A0A6J1GCV3 DNA polymerase epsilon subunit2.9e-14871.72Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHF+LED TASVEINL++A          KITTGLFTENTIVVAEGEMLVEGIF+VITCGFPPLEDR
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGG L+KEET+                    LEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVE+VPSLFV MGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        LAFNS+SSLRLQFG+LGKMIAA PRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

A0A6J1KGF0 DNA polymerase epsilon subunit3.8e-14871.21Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLED TASVEINL++A          KITTGLFTENT+VVAEGEMLVEGIF+VITCGFPPLEDR
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DKSLKLLAGQDFFGGG L+KEET+                    LEKRA+NDMFVILSDIWLDSEEAMGKLETILDGFENVE+VPSLFV MGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        LAFNS+SSLRLQFG+LGKMIA+ PRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                             HL      IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Subjt:  -----ECVDPVSY-----------------------------HLLQKKQ-IVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

SwissProt top hitse value%identityAlignment
A7YWS7 DNA polymerase epsilon subunit 23.5e-3430.66Show/hide
Query:  EISPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSL
        ++  I++L+G T   G   V+G+I+Q+++G F+LED T +++++L+ A          +  +GL+TE+  V+AEG    + +F V   GFPP E    + 
Subjt:  EISPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSL

Query:  KLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFN
              +FFGG          P   ++K    ++      LE    + MFV +SD+WLD  E + KL  +  G+      P+ F+  GNF S P     N
Subjt:  KLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFN

Query:  SFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYF
           +L+     L  +I  +P + + S+F+F+PGP+D G  ++LPR    + +T E +  VP ++F++NPCR  +
Subjt:  SFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYF

P56282 DNA polymerase epsilon subunit 23.5e-3431.75Show/hide
Query:  EISPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSL
        ++  I++L+G T   G   V+G+I+Q+++G F+LED T +V+++L+ A          +  +GL+TE   V+AEG    + +F V   GFPP E    + 
Subjt:  EISPIQSLVGQT---GRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSL

Query:  KLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFN
              +FFGG          P   ++K    ++      LE+   + MFV LSD+WLD  E + KL  +  G+      P+ F+  GNF S P     N
Subjt:  KLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFN

Query:  SFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYF
           +L+     L  +I  +P + + S+F+F+PGP+D G  ++LPR  L + +T E +  VP ++F++NPCR  +
Subjt:  SFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYF

Q500V9 DNA polymerase epsilon subunit B2.5e-12058.59Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLED +ASVEI+L+ A          KITTG FTENTI++AEGEM V GIFQVITCGFPPLEDR
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DK+LK  +  DFFGGG L+KEE +                +   LE++AVND FVILSDIWLD EE M KLET+LDGFE+VE VPSLFVFMGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        L+F S+SSLR QFG+LG+MI  HPRLKE+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  +PNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY--------------------------HLLQ----KKQIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                          H L+       IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Subjt:  -----ECVDPVSY--------------------------HLLQ----KKQIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

Q54Y85 DNA polymerase epsilon subunit 21.9e-3527.15Show/hide
Query:  ISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKLLA
        I+P+ SL+G TGRK V+G ISQ+E+  FY+ED   +V+I+++ A          K   G+ T N+I+ A GE  ++G+F       PP E+R ++LK L 
Subjt:  ISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKLLA

Query:  GQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFNSFSS
          D FG           P  + M+  +          EK   ++  + LSD+WLDSE  M +L+ +  G++  +  P   + MGNF   P  L   +   
Subjt:  GQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFNSFSS

Query:  LRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPS--TVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI-----------------ECV-DP----
        L+  F +L  +I  +P + + ++F+F+PGP D   S   +LP+  +     ++    +P + F++NPCR  +                   C+ +P    
Subjt:  LRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPS--TVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI-----------------ECV-DP----

Query:  -VSYHLLQ-------------------------------KKQIVLGDRSKQ-QAFKYTGITCFNPGSFTNDSTFVAYRPCNQE
         +S HL++                                  +V+GD+S Q +  +  G    NP SF+ D +F  Y P N++
Subjt:  -VSYHLLQ-------------------------------KKQIVLGDRSKQ-QAFKYTGITCFNPGSFTNDSTFVAYRPCNQE

Q5ZKQ6 DNA polymerase epsilon subunit 21.0e-3632.48Show/hide
Query:  EISPIQSLVGQTGR---KWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSL
        ++  +++L+G T +     V+G+I+Q+++G ++LED T  V+++L+ A          +  +GL+TE+  V+AEG    + +F V   GFPP E    + 
Subjt:  EISPIQSLVGQTGR---KWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSL

Query:  KLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFN
              +FFGG          P   ++K    ++      LE    + MFV LSD+WLD  E + KL T+  G+ +    P+ F F GNF S P     N
Subjt:  KLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFN

Query:  SFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYF
           SL+     L  +I  +P + + S+F+F+PGP+D GP +VLPR  L + +T+E +  VP ++F++NPCR  +
Subjt:  SFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYF

Arabidopsis top hitse value%identityAlignment
AT5G22110.1 DNA polymerase epsilon subunit B21.8e-12158.59Show/hide
Query:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR
        MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLED +ASVEI+L+ A          KITTG FTENTI++AEGEM V GIFQVITCGFPPLEDR
Subjt:  MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDR

Query:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN
        DK+LK  +  DFFGGG L+KEE +                +   LE++AVND FVILSDIWLD EE M KLET+LDGFE+VE VPSLFVFMGNFCSRPCN
Subjt:  DKSLKLLAGQDFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCN

Query:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------
        L+F S+SSLR QFG+LG+MI  HPRLKE+S+FLFIPGP+DAGPSTVLPRCALPKYLTEEL+  +PNAIFSSNPCR  F                      
Subjt:  LAFNSFSSLRLQFGRLGKMIAAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFI---------------------

Query:  -----ECVDPVSY--------------------------HLLQ----KKQIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
             E  DP  +                          H L+       IVLGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Subjt:  -----ECVDPVSY--------------------------HLLQ----KKQIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAGTCTCTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTA
CTTGGAGGACTTTACTGCGTCTGTGGAAATAAATTTAACTAATGCTATATCCTTTACTGGCATCTTCTTTTATCACAAGATAACTACAGGTCTATTTACAGAGAACACCA
TTGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTTCAGGTGATTACATGTGGATTTCCTCCATTAGAGGACAGAGACAAGTCTCTTAAATTGCTAGCAGGCCAG
GACTTCTTTGGAGGTGGTGTTCTTTCTAAGGAGGAGACTGTATCCCCTTTCTTTCGAGCTATGAAAGGATTTCTTAATATGCAGTGGAATGAAAAGTGCTATCTTGAAAA
GAGAGCTGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATTCTTGATGGTTTTGAGAATGTGGAAGTGG
TTCCTTCCTTATTTGTTTTCATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTTCTCAAGTCTCAGACTACAATTTGGTAGACTAGGAAAAATGATA
GCAGCTCATCCACGATTAAAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGCCCATCAACCGTTCTACCTAGGTGTGCTTTGCCAAAGTATTTAAC
CGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGACTTACTTTATAGAATGCGTCGATCCTGTCTCATACCACCTTCTACAGAAGAAAC
AAATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCTTTCACAAATGACAGCACTTTTGTGGCATATCGTCCT
TGCAATCAAGAAGTTGAATTATCTGCGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAGTCTCTGGTGGGGCAAACAGGGAGGAAATGGGTCATGGGAGTGATCTCTCAGATGGAGGATGGTCACTTTTA
CTTGGAGGACTTTACTGCGTCTGTGGAAATAAATTTAACTAATGCTATATCCTTTACTGGCATCTTCTTTTATCACAAGATAACTACAGGTCTATTTACAGAGAACACCA
TTGTTGTAGCAGAAGGAGAGATGCTCGTGGAGGGCATTTTTCAGGTGATTACATGTGGATTTCCTCCATTAGAGGACAGAGACAAGTCTCTTAAATTGCTAGCAGGCCAG
GACTTCTTTGGAGGTGGTGTTCTTTCTAAGGAGGAGACTGTATCCCCTTTCTTTCGAGCTATGAAAGGATTTCTTAATATGCAGTGGAATGAAAAGTGCTATCTTGAAAA
GAGAGCTGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATTCTTGATGGTTTTGAGAATGTGGAAGTGG
TTCCTTCCTTATTTGTTTTCATGGGGAATTTTTGTTCCCGTCCATGTAATCTTGCCTTCAATTCTTTCTCAAGTCTCAGACTACAATTTGGTAGACTAGGAAAAATGATA
GCAGCTCATCCACGATTAAAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGCCCATCAACCGTTCTACCTAGGTGTGCTTTGCCAAAGTATTTAAC
CGAAGAGCTTCAGATGCACGTCCCAAATGCCATCTTCTCAAGTAACCCTTGCAGGACTTACTTTATAGAATGCGTCGATCCTGTCTCATACCACCTTCTACAGAAGAAAC
AAATAGTTCTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTCAATCCTGGTTCTTTCACAAATGACAGCACTTTTGTGGCATATCGTCCT
TGCAATCAAGAAGTTGAATTATCTGCGTTGTAA
Protein sequenceShow/hide protein sequence
MSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDFTASVEINLTNAISFTGIFFYHKITTGLFTENTIVVAEGEMLVEGIFQVITCGFPPLEDRDKSLKLLAGQ
DFFGGGVLSKEETVSPFFRAMKGFLNMQWNEKCYLEKRAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVFMGNFCSRPCNLAFNSFSSLRLQFGRLGKMI
AAHPRLKEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRTYFIECVDPVSYHLLQKKQIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRP
CNQEVELSAL