; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034894 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034894
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiongeneral transcription factor 3C polypeptide 5-like
Genome locationscaffold3:24869542..24874581
RNA-Seq ExpressionSpg034894
SyntenySpg034894
Gene Ontology termsGO:0006384 - transcription initiation from RNA polymerase III promoter (biological process)
GO:0015074 - DNA integration (biological process)
GO:0000127 - transcription factor TFIIIC complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR019136 - Transcription factor IIIC subunit 5, HTH domain
IPR040454 - Transcription factor IIIC subunit Tfc1/Sfc1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142476.1 general transcription factor 3C polypeptide 5 isoform X2 [Cucumis sativus]2.1e-8159.72Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN
        K+ P  L  LKTPA+++ +KKSETV  P    CEVD+EPVLAIDFNIKD                                                   
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN

Query:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI
                                IPKTVIWEKY+PQGSDEWD+QVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  RRLLSRIAYYFSSGPFQRFWI
Subjt:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI

Query:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        KKGYDPRKD +S+IYQRIDFRVP+SLRSYCNSNASN+L  GHA I+AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE  CS
Subjt:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

XP_008465056.1 PREDICTED: general transcription factor 3C polypeptide 5-like isoform X1 [Cucumis melo]2.1e-8160.07Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN
        K+ P  L  LKTP +++ +KKSETV  P    CEVD+EPVLAIDFNIKD                                                   
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN

Query:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI
                                IPKTVIWEKY+PQGSDEWDFQVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  RRLLSRIAYYFSSGPFQRFWI
Subjt:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI

Query:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        KKGYDPRKD +SRIYQRIDFRVP+SLRSYCNS+AS+KL  GHA I AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE SCS
Subjt:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

XP_022927790.1 general transcription factor 3C polypeptide 5-like [Cucurbita moschata]1.3e-8662.37Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN
        K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD                                                       
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN

Query:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY
                            IPKTVIWEKY+PQGS+EWD+QVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLSRIAYYFSSGPFQRFWIKKGY
Subjt:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY

Query:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        DPRKDCDSR YQRIDFRVP SLRSYCNSNASN++S  H +I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Subjt:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

XP_022989615.1 general transcription factor 3C polypeptide 5-like [Cucurbita maxima]6.2e-8662.01Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN
        K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD                                                       
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN

Query:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY
                            IPKTVIWEK++PQGS+EWDFQVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLSRIAYYFSSGPFQRFWIKKGY
Subjt:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY

Query:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        DPRKDCDSR YQRIDFRVP SLRSYCNSNAS+++S  H +I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Subjt:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

XP_023530657.1 general transcription factor 3C polypeptide 5-like [Cucurbita pepo subsp. pepo]5.6e-8762.72Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN
        K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD                                                       
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN

Query:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY
                            IPKTVIWEKY+PQGS+EWDFQVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLSRIAYYFSSGPFQRFWIKKGY
Subjt:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY

Query:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        DPRKDCDSR YQRIDFRVP SLRSYCNSNASN++S  H +I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Subjt:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

TrEMBL top hitse value%identityAlignment
A0A0A0KV91 Uncharacterized protein6.3e-9265.72Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN
        K+ P  L  LKTPA+++ +KKSETV  P    CEVD+EPVLAIDFNIKDIL                                               +N
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN

Query:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI
        LE NLF         LLLDLTFLHIPKTVIWEKY+PQGSDEWD+QVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  RRLLSRIAYYFSSGPFQRFWI
Subjt:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI

Query:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        KKGYDPRKD +S+IYQRIDFRVP+SLRSYCNSNASN+L  GHA I+AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE  CS
Subjt:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

A0A1S3CMW8 general transcription factor 3C polypeptide 5-like isoform X21.0e-8160.07Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN
        K+ P  L  LKTP +++ +KKSETV  P    CEVD+EPVLAIDFNIKD                                                   
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN

Query:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI
                                IPKTVIWEKY+PQGSDEWDFQVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  RRLLSRIAYYFSSGPFQRFWI
Subjt:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI

Query:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        KKGYDPRKD +SRIYQRIDFRVP+SLRSYCNS+AS+KL  GHA I AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE SCS
Subjt:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

A0A1S4E516 general transcription factor 3C polypeptide 5-like isoform X11.0e-8160.07Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN
        K+ P  L  LKTP +++ +KKSETV  P    CEVD+EPVLAIDFNIKD                                                   
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIP----CEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLN

Query:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI
                                IPKTVIWEKY+PQGSDEWDFQVAVSKLFEERPIWPK+SLV+RMLDMGL F HG  RRLLSRIAYYFSSGPFQRFWI
Subjt:  LEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWI

Query:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        KKGYDPRKD +SRIYQRIDFRVP+SLRSYCNS+AS+KL  GHA I AFQVFP KFQTSLQLFEL+DEYIQEEIRKPSEE SCS
Subjt:  KKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

A0A6J1EPX9 general transcription factor 3C polypeptide 5-like6.1e-8762.37Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN
        K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD                                                       
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN

Query:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY
                            IPKTVIWEKY+PQGS+EWD+QVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLSRIAYYFSSGPFQRFWIKKGY
Subjt:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY

Query:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        DPRKDCDSR YQRIDFRVP SLRSYCNSNASN++S  H +I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Subjt:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

A0A6J1JKL2 general transcription factor 3C polypeptide 5-like3.0e-8662.01Show/hide
Query:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN
        K+ P  L  LKTP+MF  +KK ET H PCEVD+EPVLAIDFNIKD                                                       
Subjt:  KETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGSFLWLAGVALSWTGNPSFKGGSFLNLEGN

Query:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY
                            IPKTVIWEK++PQGS+EWDFQVAVS LFEERPIWPKESLVERML MGLVFRHG FRRLLSRIAYYFSSGPFQRFWIKKGY
Subjt:  LFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGY

Query:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        DPRKDCDSR YQRIDFRVP SLRSYCNSNAS+++S  H +I AFQVFPHKFQTSLQLFELEDEYIQEEI+KPSEETSCS
Subjt:  DPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

SwissProt top hitse value%identityAlignment
O14229 Transcription factor tau subunit sfc12.3e-0635.44Show/hide
Query:  AVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLS
        A+  LFE+RP+W + +L+   LD    + H   +  L  ++Y ++SGPF+  + + GYDPRKD ++  YQ + F++ L+
Subjt:  AVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLS

Q54GS8 General transcription factor 3C polypeptide 58.4e-0934.78Show/hide
Query:  LFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGH
        LFE+RPIW   SL++++   G +  H   +R+L  +A+ F  GP+++ W+K G+DPR   ++  YQ IDFR+      Y ++  S   +N +
Subjt:  LFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGH

Q8R2T8 General transcription factor 3C polypeptide 52.9e-0931.96Show/hide
Query:  WEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLR
        W+K      D+   +  + KLF+ RP+W + +     +   +       + LL  +AYY  +GP++  WI+ GYDPRK  D++IYQ +DFR+   ++
Subjt:  WEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLR

Q9Y5Q8 General transcription factor 3C polypeptide 52.2e-0938.46Show/hide
Query:  KLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLR
        KLF+ RPIW + +     +   +       + LL  IAYY  +GP++  WI+ GYDPRK+ D++IYQ +DFR+   ++
Subjt:  KLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLR

Arabidopsis top hitse value%identityAlignment
AT3G49410.1 Transcription factor IIIC, subunit 52.5e-5357.23Show/hide
Query:  LDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQR
        +D +   IPK + WE ++ + S+ W +QVAVS LFEERPIW ++S+V+R+LD GL   H    R L R AYYFSSGPF RFWIK+GYDPR D +SR+YQR
Subjt:  LDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQR

Query:  IDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        ++FRVP  LR YC++NA+N       +I AF++FP K QT LQLFEL+DEYIQ EIRKP ++T+CS
Subjt:  IDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS

AT5G24450.1 Transcription factor IIIC, subunit 53.9e-5457.83Show/hide
Query:  LDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQR
        +D +   IPK + WE YI   S++W +QVAVS LFEERP+W ++S+V+R+LD GL   H    R L R AYYFS GPF RFWIK+GYDPRKD +SR++QR
Subjt:  LDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRIAYYFSSGPFQRFWIKKGYDPRKDCDSRIYQR

Query:  IDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS
        ++FRVP  L+ YC+SNA+NK      +I AF+VFP K QT LQLFEL+DEYIQ+EIRKP ++T+C+
Subjt:  IDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCACAAGAGAACTCTGAAAGCACAACCTATCACCACCTTGGCTTTTCCTTTCAAGTTCCACGCTCTCAGCCCCTCCATGAGCCAATCATCAATTTTCTTGGGAAT
ACAAAAAGAAACTCCCAGCATCTTGGCCAAGTTAAAAACACCTGCCATGTTTGTTCAGAAAAAGAAATCAGAAACTGTACATATTCCTTGCGAGGTGGACGTAGAACCTG
TTCTTGCAATTGATTTTAACATTAAAGATATCCTTGCGAGACCCTTTAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGCCGTTTCGCGATAAGGGGAGT
TTTTTATGGTTAGCTGGGGTTGCATTATCTTGGACTGGCAACCCTTCCTTTAAAGGGGGGTCTTTTTTGAACCTTGAAGGCAATCTTTTTTTTTTAAATTATTTTTGGCA
CTTTCTTCTTTTATTGGACTTAACATTCTTACATATTCCAAAGACGGTAATCTGGGAGAAGTACATACCCCAAGGCTCAGATGAATGGGATTTTCAGGTTGCTGTATCTA
AGTTGTTTGAAGAACGTCCTATATGGCCAAAGGAGTCTCTAGTTGAACGAATGCTTGATATGGGCTTAGTTTTCAGACATGGAACGTTTAGAAGGCTTCTTTCTAGAATT
GCATATTACTTTTCAAGTGGACCTTTTCAAAGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCATATACCAACGAATTGATTTTCGAGTACC
CCTGTCATTACGAAGTTATTGCAATTCCAATGCTTCCAACAAGTTGAGTAATGGACATGCAGAGATAACTGCATTTCAAGTTTTTCCCCACAAGTTTCAAACATCATTGC
AACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAGAAAACCCTCCGAGGAAACATCTTGTTCAGTGAGTTTATCAAGTTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCCACAAGAGAACTCTGAAAGCACAACCTATCACCACCTTGGCTTTTCCTTTCAAGTTCCACGCTCTCAGCCCCTCCATGAGCCAATCATCAATTTTCTTGGGAAT
ACAAAAAGAAACTCCCAGCATCTTGGCCAAGTTAAAAACACCTGCCATGTTTGTTCAGAAAAAGAAATCAGAAACTGTACATATTCCTTGCGAGGTGGACGTAGAACCTG
TTCTTGCAATTGATTTTAACATTAAAGATATCCTTGCGAGACCCTTTAGAGACTACAGGGAGATGATCCAGGAGTTCCTCCTCCATCTGCCGTTTCGCGATAAGGGGAGT
TTTTTATGGTTAGCTGGGGTTGCATTATCTTGGACTGGCAACCCTTCCTTTAAAGGGGGGTCTTTTTTGAACCTTGAAGGCAATCTTTTTTTTTTAAATTATTTTTGGCA
CTTTCTTCTTTTATTGGACTTAACATTCTTACATATTCCAAAGACGGTAATCTGGGAGAAGTACATACCCCAAGGCTCAGATGAATGGGATTTTCAGGTTGCTGTATCTA
AGTTGTTTGAAGAACGTCCTATATGGCCAAAGGAGTCTCTAGTTGAACGAATGCTTGATATGGGCTTAGTTTTCAGACATGGAACGTTTAGAAGGCTTCTTTCTAGAATT
GCATATTACTTTTCAAGTGGACCTTTTCAAAGATTTTGGATAAAAAAGGGTTATGATCCTCGAAAAGATTGTGATTCTCGCATATACCAACGAATTGATTTTCGAGTACC
CCTGTCATTACGAAGTTATTGCAATTCCAATGCTTCCAACAAGTTGAGTAATGGACATGCAGAGATAACTGCATTTCAAGTTTTTCCCCACAAGTTTCAAACATCATTGC
AACTTTTTGAACTTGAAGATGAGTATATTCAAGAAGAGATAAGAAAACCCTCCGAGGAAACATCTTGTTCAGTGAGTTTATCAAGTTATTAA
Protein sequenceShow/hide protein sequence
MCHKRTLKAQPITTLAFPFKFHALSPSMSQSSIFLGIQKETPSILAKLKTPAMFVQKKKSETVHIPCEVDVEPVLAIDFNIKDILARPFRDYREMIQEFLLHLPFRDKGS
FLWLAGVALSWTGNPSFKGGSFLNLEGNLFFLNYFWHFLLLLDLTFLHIPKTVIWEKYIPQGSDEWDFQVAVSKLFEERPIWPKESLVERMLDMGLVFRHGTFRRLLSRI
AYYFSSGPFQRFWIKKGYDPRKDCDSRIYQRIDFRVPLSLRSYCNSNASNKLSNGHAEITAFQVFPHKFQTSLQLFELEDEYIQEEIRKPSEETSCSVSLSSY