; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg034908 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034908
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAnkyrin repeat protein
Genome locationscaffold3:26479397..26481611
RNA-Seq ExpressionSpg034908
SyntenySpg034908
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046649.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.6e-2742.44Show/hide
Query:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE
        T+GFKLFHT+FL+F+WQCC KV ATF+DVTG++ L +NH++SF AFGS G G+    VG   +  VD++ P +AP   +V  G E  ++T N   S   E
Subjt:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE

Query:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---
           +  H +  K   + A         VVS G  +G   +SN  +SHGL+T  S   KA SFG+E +K+   S GL+ HT K  + VSHG  I++K    
Subjt:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---

Query:  -GEFG
         G+FG
Subjt:  -GEFG

KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]6.3e-2141.12Show/hide
Query:  MTRGFKLFHTVFLVFAWQ-CCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLEI
        MTRGFKLF T+ LVFAW+ CC +V ATF D TGVV+  LNHQFSF AFG    G P V  ++  +V  Q   +AP GIA VGL+T ++   KA S+ L+I
Subjt:  MTRGFKLFHTVFLVFAWQ-CCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLEI

Query:  KKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHG--LKTPMSS-TKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINL
         K               + L  G +   SHG  V      +V  S G  +   MS+   K  SFG++ KK    S GL+ H  K  + VS+G  I++
Subjt:  KKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHG--LKTPMSS-TKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINL

KAA0048678.1 Ankyrin repeat protein [Cucumis melo var. makuwa]8.7e-2340.91Show/hide
Query:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSF-CAFGSHGSGI-PKVGDSVAPS-VDMQNPTKA--PGIALVGLETPMSTGNKALSFGL
        T+GFKLFH +FLV A  CC KV ATF+DVTG++ L ++H++SF    GS G G+    G S   S VD ++PT+A  P IA  GLET  +  N       
Subjt:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSF-CAFGSHGSGI-PKVGDSVAPS-VDMQNPTKA--PGIALVGLETPMSTGNKALSFGL

Query:  EIKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGA-TKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLK
          K   +H     +   R   L +G   +V++G  +G  + +SN  +SHGL+T +S   KA SFG+E +K+   S GL+ HT K  + VSHG  I++K
Subjt:  EIKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGA-TKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLK

KAE8646351.1 hypothetical protein Csa_023818, partial [Cucumis sativus]8.2e-2142.02Show/hide
Query:  ATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLE-IKKASLHPLVSKFPRARATLLLKGR
        ATFNDVTGVV+LDLNH FSF  FG    G P    S+A +V+  N  +AP GIA VGL+TP++ G+K  +FGLE IK+     +VSK        L  G 
Subjt:  ATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLE-IKKASLHPLVSKFPRARATLLLKGR

Query:  DNVVSHG-------------------VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLK
        +  +SHG                    G   S NV++SHG +T MS   K  SFG+E KK    S GL+    K    VSHG  I++K
Subjt:  DNVVSHG-------------------VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLK

TYK18187.1 Ankyrin repeat protein [Cucumis melo var. makuwa]2.0e-2742.44Show/hide
Query:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE
        T+GFKLFHT+FL+F+WQCC KV ATF+DVTG++ L +NH++SF AFGS G G+    VG   +  VD+++P +AP   +V  G E  ++T N   S   E
Subjt:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE

Query:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---
           +  H +  K   + A         VVS G  +G   +SN  +SHGL+T  S   KA SFG+E +K+   S GL+ HT K  + VSHG  I++K    
Subjt:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---

Query:  -GEFG
         G+FG
Subjt:  -GEFG

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein3.8e-3245.75Show/hide
Query:  MTRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLE-I
        M RGFKLF T+FLVFAWQ C KV ATFNDVTGVV+LDLNH FSF  FG    G P    S+A +V+  N  +AP GIA VGL+TP++ G+K  +FGLE I
Subjt:  MTRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLE-I

Query:  KKASLHPLVSKFPRARATLLLKGRDNVVSHG-------------------VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGG
        K+     +VSK        L  G +  +SHG                    G   S NV++SHG +T MS   K  SFG+E KK    S GL+    K  
Subjt:  KKASLHPLVSKFPRARATLLLKGRDNVVSHG-------------------VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGG

Query:  IVVSHGHGINLK
          VSHG  I++K
Subjt:  IVVSHGHGINLK

A0A0A0K7W7 Uncharacterized protein9.4e-2339.25Show/hide
Query:  MTRGFKLFHTVFLVFAWQ-CCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLEI
        M RGFKLF T+ LVFAW+ CC +V ATF+D TGVV+  LNHQFSF AFG    G P V  S+  +V  Q   +AP GIA VGLET ++  +K  S+ L+I
Subjt:  MTRGFKLFHTVFLVFAWQ-CCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAP-GIALVGLETPMSTGNKALSFGLEI

Query:  KKASLHPLVSKFPRARATLLLKGRDNVVSHGVGATKSS--NVVISHGLKTPMSS--------------------TKKAFSFGLETKKSIALSHGLRTHTS
         K                  +KG   VVSH   +  +S  N+  SHG K  + S                      K  SFG+E KK    + GL+ H  
Subjt:  KKASLHPLVSKFPRARATLLLKGRDNVVSHGVGATKSS--NVVISHGLKTPMSS--------------------TKKAFSFGLETKKSIALSHGLRTHTS

Query:  KGGIVVSHGHGINL
        K  + VSHG  I++
Subjt:  KGGIVVSHGHGINL

A0A5A7TZJ9 Ankyrin repeat protein1.3e-2742.44Show/hide
Query:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE
        T+GFKLFHT+FL+F+WQCC KV ATF+DVTG++ L +NH++SF AFGS G G+    VG   +  VD++ P +AP   +V  G E  ++T N   S   E
Subjt:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE

Query:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---
           +  H +  K   + A         VVS G  +G   +SN  +SHGL+T  S   KA SFG+E +K+   S GL+ HT K  + VSHG  I++K    
Subjt:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---

Query:  -GEFG
         G+FG
Subjt:  -GEFG

A0A5A7U0F0 Ankyrin repeat protein4.2e-2340.91Show/hide
Query:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSF-CAFGSHGSGI-PKVGDSVAPS-VDMQNPTKA--PGIALVGLETPMSTGNKALSFGL
        T+GFKLFH +FLV A  CC KV ATF+DVTG++ L ++H++SF    GS G G+    G S   S VD ++PT+A  P IA  GLET  +  N       
Subjt:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSF-CAFGSHGSGI-PKVGDSVAPS-VDMQNPTKA--PGIALVGLETPMSTGNKALSFGL

Query:  EIKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGA-TKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLK
          K   +H     +   R   L +G   +V++G  +G  + +SN  +SHGL+T +S   KA SFG+E +K+   S GL+ HT K  + VSHG  I++K
Subjt:  EIKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGA-TKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLK

A0A5D3D2N3 Ankyrin repeat protein9.7e-2842.44Show/hide
Query:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE
        T+GFKLFHT+FL+F+WQCC KV ATF+DVTG++ L +NH++SF AFGS G G+    VG   +  VD+++P +AP   +V  G E  ++T N   S   E
Subjt:  TRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGI--PKVGDSVAPSVDMQNPTKAPGIALV--GLETPMSTGNKALSFGLE

Query:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---
           +  H +  K   + A         VVS G  +G   +SN  +SHGL+T  S   KA SFG+E +K+   S GL+ HT K  + VSHG  I++K    
Subjt:  IKKASLHPLVSKFPRARATLLLKGRDNVVSHG--VGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKN---

Query:  -GEFG
         G+FG
Subjt:  -GEFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGAGGTTTTAAGCTTTTTCACACTGTTTTCTTAGTGTTTGCTTGGCAATGTTGTCCAAAGGTAACTGCCACTTTCAATGATGTCACTGGTGTTGTCGATCTCGA
CCTCAATCATCAATTTTCCTTCTGTGCATTTGGATCACATGGTTCTGGGATCCCAAAAGTTGGCGATAGTGTTGCACCAAGTGTAGACATGCAAAATCCTACAAAAGCAC
CGGGGATTGCTCTAGTTGGGCTTGAAACTCCAATGAGCACAGGCAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGCCTCACTGCATCCCTTGGTCTCGAAATTC
CCAAGAGCAAGGGCAACATTGCTTTTGAAGGGCAGAGACAATGTTGTTTCTCATGGTGTTGGAGCTACAAAGAGCAGCAATGTTGTTATTTCTCATGGTCTTAAAACTCC
AATGAGTAGCACCAAAAAAGCCTTTTCTTTTGGTCTTGAAACAAAGAAGAGCATAGCTTTATCTCATGGTCTCAGAACTCACACAAGTAAAGGTGGCATTGTTGTTTCTC
ATGGTCATGGAATTAATCTGAAGAATGGAGAGTTTGGTGTCCCTGCAGATTTAAGACACTTAAAGCATGACAATATTGCAAGAGGTTTTAAGCTCTTTCACACCCTTCTC
TTAGTGTTTGCTTGGGAGTGTTGTGTGAAGATGGATGTCACCAGTTTTGTAAGTCTCGGCCTCAACCATCGGTTTTCTTTTCGTGTGTTTGGATCATATCATATCAAAAC
TCCTACAAGCAGCTATAACATTGTATCAAGTGTCAATGGCATCAAGAATCCTGAGAAAGCCGGAGGATTGCCCCTGTTGTGCTTGAAACTCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGAGGTTTTAAGCTTTTTCACACTGTTTTCTTAGTGTTTGCTTGGCAATGTTGTCCAAAGGTAACTGCCACTTTCAATGATGTCACTGGTGTTGTCGATCTCGA
CCTCAATCATCAATTTTCCTTCTGTGCATTTGGATCACATGGTTCTGGGATCCCAAAAGTTGGCGATAGTGTTGCACCAAGTGTAGACATGCAAAATCCTACAAAAGCAC
CGGGGATTGCTCTAGTTGGGCTTGAAACTCCAATGAGCACAGGCAATAAAGCTTTGTCTTTTGGTCTTGAAATTAAGAAGGCCTCACTGCATCCCTTGGTCTCGAAATTC
CCAAGAGCAAGGGCAACATTGCTTTTGAAGGGCAGAGACAATGTTGTTTCTCATGGTGTTGGAGCTACAAAGAGCAGCAATGTTGTTATTTCTCATGGTCTTAAAACTCC
AATGAGTAGCACCAAAAAAGCCTTTTCTTTTGGTCTTGAAACAAAGAAGAGCATAGCTTTATCTCATGGTCTCAGAACTCACACAAGTAAAGGTGGCATTGTTGTTTCTC
ATGGTCATGGAATTAATCTGAAGAATGGAGAGTTTGGTGTCCCTGCAGATTTAAGACACTTAAAGCATGACAATATTGCAAGAGGTTTTAAGCTCTTTCACACCCTTCTC
TTAGTGTTTGCTTGGGAGTGTTGTGTGAAGATGGATGTCACCAGTTTTGTAAGTCTCGGCCTCAACCATCGGTTTTCTTTTCGTGTGTTTGGATCATATCATATCAAAAC
TCCTACAAGCAGCTATAACATTGTATCAAGTGTCAATGGCATCAAGAATCCTGAGAAAGCCGGAGGATTGCCCCTGTTGTGCTTGAAACTCCAATGA
Protein sequenceShow/hide protein sequence
MTRGFKLFHTVFLVFAWQCCPKVTATFNDVTGVVDLDLNHQFSFCAFGSHGSGIPKVGDSVAPSVDMQNPTKAPGIALVGLETPMSTGNKALSFGLEIKKASLHPLVSKF
PRARATLLLKGRDNVVSHGVGATKSSNVVISHGLKTPMSSTKKAFSFGLETKKSIALSHGLRTHTSKGGIVVSHGHGINLKNGEFGVPADLRHLKHDNIARGFKLFHTLL
LVFAWECCVKMDVTSFVSLGLNHRFSFRVFGSYHIKTPTSSYNIVSSVNGIKNPEKAGGLPLLCLKLQ