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Spg034928 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034928
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold3:26104182..26106613
RNA-Seq ExpressionSpg034928
SyntenySpg034928
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]1.9e-0441.51Show/hide
Query:  LDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLR
        L  EA+ W+ +IK ++MPT HD T+S   ++L+YCI++ I +D+ +I+CD ++
Subjt:  LDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLR

MCH80834.1 hypothetical protein [Trifolium medium]3.3e-0430.59Show/hide
Query:  VLPVVARPGVQWDGRGSVR--TLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGR
        V+  +  PG +W  + +V    +K   L  E   W   +K+ I+PTTH+ T++   +VL++CI++ I I++G+I+C  +   + R
Subjt:  VLPVVARPGVQWDGRGSVR--TLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGR

QHO34775.1 uncharacterized protein DS421_9g269870 [Arachis hypogaea]1.1e-0425.77Show/hide
Query:  VLPVVARPGVQW--DGRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGRNPPTVTKNLREIHLA
        +L  +   G  W  D +G+   LK   L  EA  W   ++  I  T + +T+ +   +LVYCI+ G +IDL QI+ D++++ A  N     ++  ++ + 
Subjt:  VLPVVARPGVQW--DGRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGRNPPTVTKNLREIHLA

Query:  Q---ENPVCALNQQHQQPQANPTAGNVHDRSDPILDLDSVHIFAELRQMINEIVEPLCQQQEE
        +   +  +  +N++  Q +      N   R +      S    +E+R+ I EI + L Q Q+E
Subjt:  Q---ENPVCALNQQHQQPQANPTAGNVHDRSDPILDLDSVHIFAELRQMINEIVEPLCQQQEE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.7e-0522.43Show/hide
Query:  LTIREPAQQNAAGPSNKRKRASAASKGKEKVVLPVVARPGVQWDGRGS--VRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDI
        L +  PA+ +    S     A     G+E      + + G++WD   +  +RT +A  L   A  W+++I+  + PTTHD+++S+  ++L+YC++ G  I
Subjt:  LTIREPAQQNAAGPSNKRKRASAASKGKEKVVLPVVARPGVQWDGRGS--VRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDI

Query:  DLGQIL------CDSLRQTAGRNPPTVTKNLREIHLAQENPVCALNQQHQQPQANPTA-GNVHDRSDPILDLDSV-HIFAELRQMINEIVEPLCQQQEEL
        ++G+++      C   RQ     P  + K L +  + +      + +  ++   +  A   + +RS+   +L  V     EL +    +++ L +Q+ E+
Subjt:  DLGQIL------CDSLRQTAGRNPPTVTKNLREIHLAQENPVCALNQQHQQPQANPTA-GNVHDRSDPILDLDSV-HIFAELRQMINEIVEPLCQQQEEL

Query:  SQRVNSMMVFLVRR
         +++ +M   L  R
Subjt:  SQRVNSMMVFLVRR

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]2.5e-0434.09Show/hide
Query:  KEKVVLPVVARPGVQWD-GRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGR
        K +  L  + + G QW      ++TL +  L  EA  W++ +K RI+PT+HD T+S   V+  YCI  GI ID+  ++    ++ A R
Subjt:  KEKVVLPVVARPGVQWD-GRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGR

TrEMBL top hitse value%identityAlignment
A0A2P5CPE8 Uncharacterized protein6.1e-0432.43Show/hide
Query:  VLPVVARPGVQWD--GRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGRN------PPTVTK--
        VL  VA  G +W+   +G+   L++  L+  A  W H++K+R++PTTH  T+S   V+L+Y ++ G  I++GQI+   +   A R       P  +T+  
Subjt:  VLPVVARPGVQWD--GRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGRN------PPTVTK--

Query:  -NLREIHLAQE
         N R  +L  E
Subjt:  -NLREIHLAQE

A0A392M2J7 Uncharacterized protein (Fragment)1.6e-0430.59Show/hide
Query:  VLPVVARPGVQWDGRGSVR--TLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGR
        V+  +  PG +W  + +V    +K   L  E   W   +K+ I+PTTH+ T++   +VL++CI++ I I++G+I+C  +   + R
Subjt:  VLPVVARPGVQWDGRGSVR--TLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGR

A0A5A7V6M5 Gag/pol protein3.6e-0436.59Show/hide
Query:  ASKGKEKVVLPVVARPGVQWDGRG-SVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQIL
        ++KG  K  L VVA PG+  + +   +R    P L  +A  WM + KN+I PT +D+T+S+ + V++YCI+    I+L +I+
Subjt:  ASKGKEKVVLPVVARPGVQWDGRG-SVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQIL

A0A5A7V8S5 Uncharacterized protein4.7e-0426.62Show/hide
Query:  LDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGRNPPTVTKNLREIHLAQENPVCALNQQHQQPQANPTAGNVHDR
        L+ EA  W  +IK +IMPT +D+T+S+  ++L+YCII+ I +++G+I+   +     R+   +   L +  L    P C      Q  Q + +  N+   
Subjt:  LDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLRQTAGRNPPTVTKNLREIHLAQENPVCALNQQHQQPQANPTAGNVHDR

Query:  S--DPILDLDSVHIFAELRQMINEIVEPLCQQQEELSQR
        S  DP   +D V     L++  +  + P+   ++E+ ++
Subjt:  S--DPILDLDSVHIFAELRQMINEIVEPLCQQQEELSQR

A0A5D3DVQ6 Uncharacterized protein9.4e-0541.51Show/hide
Query:  LDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLR
        L  EA+ W+ +IK ++MPT HD T+S   ++L+YCI++ I +D+ +I+CD ++
Subjt:  LDFEATAWMHWIKNRIMPTTHDATLSIPWVVLVYCIIKGIDIDLGQILCDSLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAAAGATCGCAAGACTCTGAAGATCATCTTCAGCTGACTCAGCGCCGCAACATTCAATCCACCGCGCTGACGATCAGGGAGCCAGCACAACAGAATGCGGCAGG
CCCAAGCAACAAGAGAAAGAGGGCCTCTGCCGCATCGAAAGGAAAAGAAAAAGTAGTCCTACCTGTGGTAGCTCGACCAGGCGTCCAATGGGATGGGCGTGGCTCTGTGC
GGACCCTCAAAGCTCCGATGCTGGACTTCGAGGCCACCGCATGGATGCATTGGATTAAGAATCGTATCATGCCCACAACGCATGATGCAACCCTTAGCATCCCGTGGGTC
GTCCTCGTATATTGCATAATCAAGGGGATCGATATTGACCTGGGCCAAATCCTATGCGACTCGCTGCGCCAGACAGCTGGCCGCAACCCTCCAACCGTGACAAAGAATTT
GCGTGAAATCCATCTGGCGCAGGAAAATCCTGTCTGCGCCCTTAATCAGCAACACCAGCAGCCGCAAGCAAATCCTACTGCCGGTAATGTCCATGACCGATCAGATCCAA
TCCTTGATTTGGACTCAGTGCACATATTCGCAGAGCTGCGGCAGATGATCAATGAGATTGTGGAGCCCCTGTGCCAACAGCAGGAAGAACTTTCCCAGCGCGTAAATTCA
ATGATGGTTTTCCTAGTGCGCAGGACGAACTCGTTTGGCAAGCTCCCCGTTGCGCCCGAGCTTTTTGTGTGCCCCCAAGGGCAACCTCGTCTTGATGGCGCTCGTCCCTC
GCAAGTCCGCCCTCCAATGGCCCCGCCGCATCCAAGAAATCCCCCGCCGCCGCCGCATTGCTTTGTTGCCCAAGTTTTCTTCAGCGCAAGCGCAGATCCTAGAGCAGTTC
GTATGATGAAAGCTGGAAGAGATGATCGCACTGACGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAAAGATCGCAAGACTCTGAAGATCATCTTCAGCTGACTCAGCGCCGCAACATTCAATCCACCGCGCTGACGATCAGGGAGCCAGCACAACAGAATGCGGCAGG
CCCAAGCAACAAGAGAAAGAGGGCCTCTGCCGCATCGAAAGGAAAAGAAAAAGTAGTCCTACCTGTGGTAGCTCGACCAGGCGTCCAATGGGATGGGCGTGGCTCTGTGC
GGACCCTCAAAGCTCCGATGCTGGACTTCGAGGCCACCGCATGGATGCATTGGATTAAGAATCGTATCATGCCCACAACGCATGATGCAACCCTTAGCATCCCGTGGGTC
GTCCTCGTATATTGCATAATCAAGGGGATCGATATTGACCTGGGCCAAATCCTATGCGACTCGCTGCGCCAGACAGCTGGCCGCAACCCTCCAACCGTGACAAAGAATTT
GCGTGAAATCCATCTGGCGCAGGAAAATCCTGTCTGCGCCCTTAATCAGCAACACCAGCAGCCGCAAGCAAATCCTACTGCCGGTAATGTCCATGACCGATCAGATCCAA
TCCTTGATTTGGACTCAGTGCACATATTCGCAGAGCTGCGGCAGATGATCAATGAGATTGTGGAGCCCCTGTGCCAACAGCAGGAAGAACTTTCCCAGCGCGTAAATTCA
ATGATGGTTTTCCTAGTGCGCAGGACGAACTCGTTTGGCAAGCTCCCCGTTGCGCCCGAGCTTTTTGTGTGCCCCCAAGGGCAACCTCGTCTTGATGGCGCTCGTCCCTC
GCAAGTCCGCCCTCCAATGGCCCCGCCGCATCCAAGAAATCCCCCGCCGCCGCCGCATTGCTTTGTTGCCCAAGTTTTCTTCAGCGCAAGCGCAGATCCTAGAGCAGTTC
GTATGATGAAAGCTGGAAGAGATGATCGCACTGACGTGTGA
Protein sequenceShow/hide protein sequence
MSQRSQDSEDHLQLTQRRNIQSTALTIREPAQQNAAGPSNKRKRASAASKGKEKVVLPVVARPGVQWDGRGSVRTLKAPMLDFEATAWMHWIKNRIMPTTHDATLSIPWV
VLVYCIIKGIDIDLGQILCDSLRQTAGRNPPTVTKNLREIHLAQENPVCALNQQHQQPQANPTAGNVHDRSDPILDLDSVHIFAELRQMINEIVEPLCQQQEELSQRVNS
MMVFLVRRTNSFGKLPVAPELFVCPQGQPRLDGARPSQVRPPMAPPHPRNPPPPPHCFVAQVFFSASADPRAVRMMKAGRDDRTDV