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Spg034929 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg034929
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAnkyrin repeat protein
Genome locationscaffold3:26784830..26788915
RNA-Seq ExpressionSpg034929
SyntenySpg034929
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048667.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.0e-0440.5Show/hide
Query:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSSCNAVVS-----------------SAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG
        S S++VA G K G+N GG  V VSS  E+S KS  + V+S                 S +E  VKS+++ VVSHGH A    G A L S G+  +KS S 
Subjt:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSSCNAVVS-----------------SAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG

Query:  -SVFVSHNMEATKSSASTCTS
         S+F SHN++ TK +    TS
Subjt:  -SVFVSHNMEATKSSASTCTS

KAA0048668.1 Ankyrin repeat protein [Cucumis melo var. makuwa]1.8e-0440.5Show/hide
Query:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSS-----------------CNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG
        S S+IVA G K G+N GG  V VSS  E++ KS                   + VVS+ +E  VKS+++ VVSHGH A    G A L S G+  +KS S 
Subjt:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSS-----------------CNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG

Query:  -SVFVSHNMEATKSSASTCTS
         S+F SHN++ TK +    TS
Subjt:  -SVFVSHNMEATKSSASTCTS

KGN44963.1 hypothetical protein Csa_016517 [Cucumis sativus]6.8e-0438.33Show/hide
Query:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKS-----------------SCNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG
        S S+IV+ G K G+N G  +V VS+  E+S KS                 S + VV+S +E  VKS+++ VVSHGH A    G A L SHG+      S 
Subjt:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKS-----------------SCNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG

Query:  SVFVSHNMEATKSSASTCTS
        S F S+N++ TK +    TS
Subjt:  SVFVSHNMEATKSSASTCTS

TrEMBL top hitse value%identityAlignment
A0A0A0K662 Ankyrin repeat protein3.3e-0438.33Show/hide
Query:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKS-----------------SCNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG
        S S+IV+ G K G+N G  +V VS+  E+S KS                 S + VV+S +E  VKS+++ VVSHGH A    G A L SHG+      S 
Subjt:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKS-----------------SCNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG

Query:  SVFVSHNMEATKSSASTCTS
        S F S+N++ TK +    TS
Subjt:  SVFVSHNMEATKSSASTCTS

A0A5A7U0E4 Ankyrin repeat protein8.6e-0540.5Show/hide
Query:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSS-----------------CNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG
        S S+IVA G K G+N GG  V VSS  E++ KS                   + VVS+ +E  VKS+++ VVSHGH A    G A L S G+  +KS S 
Subjt:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSS-----------------CNAVVSSAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG

Query:  -SVFVSHNMEATKSSASTCTS
         S+F SHN++ TK +    TS
Subjt:  -SVFVSHNMEATKSSASTCTS

A0A5A7U312 Ankyrin repeat protein5.1e-0540.5Show/hide
Query:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSSCNAVVS-----------------SAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG
        S S++VA G K G+N GG  V VSS  E+S KS  + V+S                 S +E  VKS+++ VVSHGH A    G A L S G+  +KS S 
Subjt:  SGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSSCNAVVS-----------------SAREMSVKSSSNAVVSHGHKATKNSGDA-LVSHGLEATKSGSG

Query:  -SVFVSHNMEATKSSASTCTS
         S+F SHN++ TK +    TS
Subjt:  -SVFVSHNMEATKSSASTCTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCGTGGGTCCAGCCGTCCGGCCAAGTGTGTGCCGTCGCCGTCGCTCGTCGAGCCGCGCCGCTGCCTAGATCGAAGTCGCTTTCCTCTTGCAGCCGCGCCGCCCT
TCCTCTCTGTGTCGTGGGTTTTAGATCTGTGGCTCTCGCTCTCTCGTTCCGGGCGTTTTCGGCCAAGAAGACTCATGGGTGTTCGATTAAGTTCGAAACACTTCGACTTG
GATACCCACTGCCCAAGGACTATTATAGCGCATCGTTAGAGGTTTGTAAAACCCGTCTAGCGTGGAAGCGGGTTCGTTTGGGTAAGTTCTTGGTTGTCCCTTCGTTTGTA
GCTTTGAAGCTAGCGGCTGAAAAACCTTATCTGGAGCCGTTTGGCGAACACCCATTGCCCGTTTTCAAGGTGCTTGTGGAGCTTGGTGCAAGTGTCGCCTCGTTGGTTTT
GCGTAGCGTGGCGCGTAATGCACGTGTAAGGTTTTGCGTAGCATGGCGCGTAATGCATTCCATTGGTTTGCGCAGCATGTTAGTACTAAGTAGCGGCAGTGTTATTGTTG
CTCATGGTGGCAAGGCTGGTCTGAACAGTGGCGGAGGCAGTGTTGTTGTTTCTAGTGCTCGTGAAATGAGTGTGAAGAGTAGCTGCAATGCTGTTGTTTCTAGTGCTCGT
GAAATGAGTGTGAAGAGTAGCAGCAATGCTGTTGTTTCTCATGGTCATAAAGCTACTAAGAATAGTGGTGATGCTCTTGTATCTCATGGCCTTGAAGCTACTAAGAGCGG
TAGTGGTAGCGTTTTCGTTTCTCATAATATGGAAGCCACAAAGAGCAGCGCCAGCACGTGCACCTCACATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCGTGGGTCCAGCCGTCCGGCCAAGTGTGTGCCGTCGCCGTCGCTCGTCGAGCCGCGCCGCTGCCTAGATCGAAGTCGCTTTCCTCTTGCAGCCGCGCCGCCCT
TCCTCTCTGTGTCGTGGGTTTTAGATCTGTGGCTCTCGCTCTCTCGTTCCGGGCGTTTTCGGCCAAGAAGACTCATGGGTGTTCGATTAAGTTCGAAACACTTCGACTTG
GATACCCACTGCCCAAGGACTATTATAGCGCATCGTTAGAGGTTTGTAAAACCCGTCTAGCGTGGAAGCGGGTTCGTTTGGGTAAGTTCTTGGTTGTCCCTTCGTTTGTA
GCTTTGAAGCTAGCGGCTGAAAAACCTTATCTGGAGCCGTTTGGCGAACACCCATTGCCCGTTTTCAAGGTGCTTGTGGAGCTTGGTGCAAGTGTCGCCTCGTTGGTTTT
GCGTAGCGTGGCGCGTAATGCACGTGTAAGGTTTTGCGTAGCATGGCGCGTAATGCATTCCATTGGTTTGCGCAGCATGTTAGTACTAAGTAGCGGCAGTGTTATTGTTG
CTCATGGTGGCAAGGCTGGTCTGAACAGTGGCGGAGGCAGTGTTGTTGTTTCTAGTGCTCGTGAAATGAGTGTGAAGAGTAGCTGCAATGCTGTTGTTTCTAGTGCTCGT
GAAATGAGTGTGAAGAGTAGCAGCAATGCTGTTGTTTCTCATGGTCATAAAGCTACTAAGAATAGTGGTGATGCTCTTGTATCTCATGGCCTTGAAGCTACTAAGAGCGG
TAGTGGTAGCGTTTTCGTTTCTCATAATATGGAAGCCACAAAGAGCAGCGCCAGCACGTGCACCTCACATGTCTAA
Protein sequenceShow/hide protein sequence
MRSWVQPSGQVCAVAVARRAAPLPRSKSLSSCSRAALPLCVVGFRSVALALSFRAFSAKKTHGCSIKFETLRLGYPLPKDYYSASLEVCKTRLAWKRVRLGKFLVVPSFV
ALKLAAEKPYLEPFGEHPLPVFKVLVELGASVASLVLRSVARNARVRFCVAWRVMHSIGLRSMLVLSSGSVIVAHGGKAGLNSGGGSVVVSSAREMSVKSSCNAVVSSAR
EMSVKSSSNAVVSHGHKATKNSGDALVSHGLEATKSGSGSVFVSHNMEATKSSASTCTSHV