; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035002 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035002
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold3:24134623..24137988
RNA-Seq ExpressionSpg035002
SyntenySpg035002
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]2.7e-0424.39Show/hide
Query:  PTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDFSAR---------------------------------------------
        P FI  ++ ++G  Q C+ P    +PLVREFYA   +  Q T+ +++  V F+AR                                             
Subjt:  PTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDFSAR---------------------------------------------

Query:  ----TLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKL---IANSKQKVTSPEKKA
            T + ++LK  A +W + +  R MP+TH  T++++RV+L+  +   I+ + +++T  E KA
Subjt:  ----TLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKL---IANSKQKVTSPEKKA
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.9e-0423.08Show/hide
Query:  KTSTKEPRMEMQVEAHPDAQTRLAIMKRWVMMCEKSF----SMKTGPLPTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDF
        +T   E R E  ++  P             +  EK F    S   G LP FI  ++ ++  +Q C  P+   +PLVREFYA   + ++ T+ +R   V +
Subjt:  KTSTKEPRMEMQVEAHPDAQTRLAIMKRWVMMCEKSF----SMKTGPLPTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDF

Query:  S-------------------------------------------------ARTLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKLI
        S                                                 A T +   L P A VW + +K+ ++PTTH  T+S++R++L+  ++
Subjt:  S-------------------------------------------------ARTLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKLI
TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.9e-0423.08Show/hide
Query:  KTSTKEPRMEMQVEAHPDAQTRLAIMKRWVMMCEKSF----SMKTGPLPTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDF
        +T   E R E  ++  P             +  EK F    S   G LP FI  ++ ++  +Q C  P+   +PLVREFYA   + ++ T+ +R   V +
Subjt:  KTSTKEPRMEMQVEAHPDAQTRLAIMKRWVMMCEKSF----SMKTGPLPTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDF

Query:  S-------------------------------------------------ARTLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKLI
        S                                                 A T +   L P A VW + +K+ ++PTTH  T+S++R++L+  ++
Subjt:  S-------------------------------------------------ARTLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKLI
W9QTD9 Uncharacterized protein1.3e-0424.39Show/hide
Query:  PTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDFSAR---------------------------------------------
        P FI  ++ ++G  Q C+ P    +PLVREFYA   +  Q T+ +++  V F+AR                                             
Subjt:  PTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMVDFSAR---------------------------------------------

Query:  ----TLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKL---IANSKQKVTSPEKKA
            T + ++LK  A +W + +  R MP+TH  T++++RV+L+  +   I+ + +++T  E KA
Subjt:  ----TLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKL---IANSKQKVTSPEKKA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCAAAGTTGCAGCAGCAGGAGGAGCAGAGTAGAATAGTAGCTGATGCTCTATGGTTTTCAAAAGCCATGGCCTGCCAGATTAGAGATGAGCAGCTGGCTGAAGA
CAGAAAAAGAAAGAAGGAAGCGGAAAGGGAGACTAAGAGGAAGAAAATCGAAGAAGAAGAGCAAGCTACTCTAGACTTCGCAGCCGCTTGCTTGAAGGACTCAGTGGATA
CCACTGAGAAAGAAGAAGAAGAATTTATGCCCGCTTCTGAGGGCTATTCAAGAGAATTTGCAAAGAAGTTTGCGGTCGCAAATGTGGTGCAAACAAAGCAAGAAACTGAG
TCTGCACTAGATCCTGAAGTGCATTCTAAAGTGCAAGTCCCACCACCACCAAAAGAGGATGAAAATGTGCTTGAGGACTTGTTCGAGCACCAGAAGGAAGCAATGTTTGA
GGTCCTGTTCGAACATGGGCAAGAAGAGGATCAACAAGCTCCAATTGATGAAGAAGAGGTCCTTGAGATCTCAAGGGACCAAATGCCCAGGAGGGGCAGAAACGAAGGTG
ATGGCAGTGCAGCTGAAGGGAGAACTAAGAAAAGAAAAAGAGTAGAGAGTTCCCTGAGGAGGCCTAGCACTAGGGGAACGACTTCTGTGTTTTCCCAAGCAAAGACACCA
CCATCACCGCCACCAGTGAAGAGAGAACAATCTGTTCCTCGGTCGAAGAAGACTTCAACAAAGGAGCCGAGGATGGAAATGCAAGTGGAAGCTCACCCAGACGCTCAGAC
CCGACTAGCTATCATGAAAAGGTGGGTTATGATGTGTGAAAAATCATTCTCCATGAAGACAGGTCCTCTCCCAACATTCATCGAGGATATTTTACGTAGGTATGGCTGTG
AGCAGCTATGCAAGGAGCCAAAGGCTGCATCTATCCCATTGGTTCGAGAATTCTATGCGCAGAGAGGGGAAGAGATGCAGACGACCATGCTCATACGTGATCGGATGGTG
GACTTTTCAGCAAGGACTCTACTGTCAAGAGATTTGAAGCCAGAAGCAGCTGTCTGGCTGTACGTGATCAAGAATAGGATAATGCCAACAACACATGACACCACCATATC
TCAAGAACGTGTCATCTTAATCAAGAAGCTCATAGCCAATTCCAAGCAGAAGGTGACTTCACCTGAAAAGAAGGCTAAAGTAGCCTCTCCTACAACTCAACACTCAAAAT
CTCCTGAAGAAGCCACGACTGCAGTGCCCAGTCGGTTTCGGGGTCAAAACGACCGGTTAGGTGCGAAGAAGTCTCGTTCAAAAGGACCCGCGGATGACTCAGAACTGCCT
CTGTTTTTCCAGAAATGCGGTCGCATTTCATTTTGCCTTCTCGCATTTCTGGGCAAATTCCAGCTTTTCCTCTTAGGCGATGCGACCGCAAAATCATCACATAAATTACC
AGATGCGGCTGCAAGTCAACAACAACCTCTAGTCCCTAAACCACAACCTGAAAATGATTTGGTGGTTTTAAGGAGAGACTTGGAGAAGATGAGGAGCCAGTTTAAGGAGT
ACCTGACCTATGCTAAAGAGCAAGATGGAGTTGTCAGATGCATCTTGGAGAATGTGGTGGATGATCTTGATGACTACCTTCCACCATTCCCCGAAATAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCAAAGTTGCAGCAGCAGGAGGAGCAGAGTAGAATAGTAGCTGATGCTCTATGGTTTTCAAAAGCCATGGCCTGCCAGATTAGAGATGAGCAGCTGGCTGAAGA
CAGAAAAAGAAAGAAGGAAGCGGAAAGGGAGACTAAGAGGAAGAAAATCGAAGAAGAAGAGCAAGCTACTCTAGACTTCGCAGCCGCTTGCTTGAAGGACTCAGTGGATA
CCACTGAGAAAGAAGAAGAAGAATTTATGCCCGCTTCTGAGGGCTATTCAAGAGAATTTGCAAAGAAGTTTGCGGTCGCAAATGTGGTGCAAACAAAGCAAGAAACTGAG
TCTGCACTAGATCCTGAAGTGCATTCTAAAGTGCAAGTCCCACCACCACCAAAAGAGGATGAAAATGTGCTTGAGGACTTGTTCGAGCACCAGAAGGAAGCAATGTTTGA
GGTCCTGTTCGAACATGGGCAAGAAGAGGATCAACAAGCTCCAATTGATGAAGAAGAGGTCCTTGAGATCTCAAGGGACCAAATGCCCAGGAGGGGCAGAAACGAAGGTG
ATGGCAGTGCAGCTGAAGGGAGAACTAAGAAAAGAAAAAGAGTAGAGAGTTCCCTGAGGAGGCCTAGCACTAGGGGAACGACTTCTGTGTTTTCCCAAGCAAAGACACCA
CCATCACCGCCACCAGTGAAGAGAGAACAATCTGTTCCTCGGTCGAAGAAGACTTCAACAAAGGAGCCGAGGATGGAAATGCAAGTGGAAGCTCACCCAGACGCTCAGAC
CCGACTAGCTATCATGAAAAGGTGGGTTATGATGTGTGAAAAATCATTCTCCATGAAGACAGGTCCTCTCCCAACATTCATCGAGGATATTTTACGTAGGTATGGCTGTG
AGCAGCTATGCAAGGAGCCAAAGGCTGCATCTATCCCATTGGTTCGAGAATTCTATGCGCAGAGAGGGGAAGAGATGCAGACGACCATGCTCATACGTGATCGGATGGTG
GACTTTTCAGCAAGGACTCTACTGTCAAGAGATTTGAAGCCAGAAGCAGCTGTCTGGCTGTACGTGATCAAGAATAGGATAATGCCAACAACACATGACACCACCATATC
TCAAGAACGTGTCATCTTAATCAAGAAGCTCATAGCCAATTCCAAGCAGAAGGTGACTTCACCTGAAAAGAAGGCTAAAGTAGCCTCTCCTACAACTCAACACTCAAAAT
CTCCTGAAGAAGCCACGACTGCAGTGCCCAGTCGGTTTCGGGGTCAAAACGACCGGTTAGGTGCGAAGAAGTCTCGTTCAAAAGGACCCGCGGATGACTCAGAACTGCCT
CTGTTTTTCCAGAAATGCGGTCGCATTTCATTTTGCCTTCTCGCATTTCTGGGCAAATTCCAGCTTTTCCTCTTAGGCGATGCGACCGCAAAATCATCACATAAATTACC
AGATGCGGCTGCAAGTCAACAACAACCTCTAGTCCCTAAACCACAACCTGAAAATGATTTGGTGGTTTTAAGGAGAGACTTGGAGAAGATGAGGAGCCAGTTTAAGGAGT
ACCTGACCTATGCTAAAGAGCAAGATGGAGTTGTCAGATGCATCTTGGAGAATGTGGTGGATGATCTTGATGACTACCTTCCACCATTCCCCGAAATAAACTAG
Protein sequenceShow/hide protein sequence
MGPKLQQQEEQSRIVADALWFSKAMACQIRDEQLAEDRKRKKEAERETKRKKIEEEEQATLDFAAACLKDSVDTTEKEEEEFMPASEGYSREFAKKFAVANVVQTKQETE
SALDPEVHSKVQVPPPPKEDENVLEDLFEHQKEAMFEVLFEHGQEEDQQAPIDEEEVLEISRDQMPRRGRNEGDGSAAEGRTKKRKRVESSLRRPSTRGTTSVFSQAKTP
PSPPPVKREQSVPRSKKTSTKEPRMEMQVEAHPDAQTRLAIMKRWVMMCEKSFSMKTGPLPTFIEDILRRYGCEQLCKEPKAASIPLVREFYAQRGEEMQTTMLIRDRMV
DFSARTLLSRDLKPEAAVWLYVIKNRIMPTTHDTTISQERVILIKKLIANSKQKVTSPEKKAKVASPTTQHSKSPEEATTAVPSRFRGQNDRLGAKKSRSKGPADDSELP
LFFQKCGRISFCLLAFLGKFQLFLLGDATAKSSHKLPDAAASQQQPLVPKPQPENDLVVLRRDLEKMRSQFKEYLTYAKEQDGVVRCILENVVDDLDDYLPPFPEIN