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Spg035042 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035042
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold3:27922845..27923222
RNA-Seq ExpressionSpg035042
SyntenySpg035042
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571728.1 hypothetical protein SDJN03_28456, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4483.33Show/hide
Query:  MAKSTSTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSH-TSRRGATAAPPTTLIEDIFEEIGDGA
        MAKS S+CKNRRF+TS FS+SEIDVAIQL+HLSEDSDY  +  ASSTSCSDDKS ASATSATNAAGMEDDGSH +SRRGAT  P T+LIEDIFEEIGD +
Subjt:  MAKSTSTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSH-TSRRGATAAPPTTLIEDIFEEIGDGA

Query:  NRRRRKRRSRSVYEIYKLTKPVISVK
        NRRRRKRRSRSVYEIYKLTKP ISVK
Subjt:  NRRRRKRRSRSVYEIYKLTKPVISVK
KAG6588821.1 hypothetical protein SDJN03_17386, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3877.6Show/hide
Query:  MAKSTSTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATAAPPTTLIEDIFEEIGDGAN
        MA+S ST +NRRFQTS FS+SEIDVAIQLIHLSEDSDYHD++ ASSTSCSDDKS ASA S +NA  MEDDG +  RRG      TT IEDI+EEIGDGAN
Subjt:  MAKSTSTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATAAPPTTLIEDIFEEIGDGAN

Query:  RRRRKRRSRSVYEIYKLTKPVISVK
        RRRRKRRSRSVYEIYKLTKPVI VK
Subjt:  RRRRKRRSRSVYEIYKLTKPVISVK
TrEMBL top hitse value%identityAlignment
A0A5N6RSQ1 Uncharacterized protein5.5e-0440.16Show/hide
Query:  MAKSTSTCKNRRFQTS---FFSESEIDVAIQLIHLSEDSD--YHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATAAPPTTLIEDIFEEI
        MAKS   CK RR Q      FSESE+DVA QLI LS +SD  +H+D   ++TSC + K         N  G   D S T+         TT+ E   E+ 
Subjt:  MAKSTSTCKNRRFQTS---FFSESEIDVAIQLIHLSEDSD--YHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATAAPPTTLIEDIFEEI

Query:  GDGANRRRRKRRSRSVYEIYKLTKPVI
         +      RKRR RS+  +Y  TKPVI
Subjt:  GDGANRRRRKRRSRSVYEIYKLTKPVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCAACTTCCACCTGCAAAAATCGAAGATTCCAGACCTCCTTCTTCTCCGAATCTGAAATCGACGTCGCAATACAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACGACATCACCGCCTCCTCGACTAGTTGCAGCGACGACAAATCCTTCGCCTCCGCCACCAGCGCCACCAACGCCGCTGGAATGGAAGACGACGGAAGCCACA
CCAGCCGTCGCGGAGCCACGGCGGCGCCTCCAACCACTCTGATAGAAGACATCTTCGAAGAAATCGGAGACGGCGCGAATCGGAGGCGGAGGAAGCGCCGGTCGCGTTCG
GTTTACGAGATTTACAAATTGACGAAGCCTGTAATCTCCGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAATCAACTTCCACCTGCAAAAATCGAAGATTCCAGACCTCCTTCTTCTCCGAATCTGAAATCGACGTCGCAATACAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACGACATCACCGCCTCCTCGACTAGTTGCAGCGACGACAAATCCTTCGCCTCCGCCACCAGCGCCACCAACGCCGCTGGAATGGAAGACGACGGAAGCCACA
CCAGCCGTCGCGGAGCCACGGCGGCGCCTCCAACCACTCTGATAGAAGACATCTTCGAAGAAATCGGAGACGGCGCGAATCGGAGGCGGAGGAAGCGCCGGTCGCGTTCG
GTTTACGAGATTTACAAATTGACGAAGCCTGTAATCTCCGTGAAGTAA
Protein sequenceShow/hide protein sequence
MAKSTSTCKNRRFQTSFFSESEIDVAIQLIHLSEDSDYHDDITASSTSCSDDKSFASATSATNAAGMEDDGSHTSRRGATAAPPTTLIEDIFEEIGDGANRRRRKRRSRS
VYEIYKLTKPVISVK