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Spg035057 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035057
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold6:27987380..27988221
RNA-Seq ExpressionSpg035057
SyntenySpg035057
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047856.1 hypothetical protein E6C27_scaffold133G001210 [Cucumis melo var. makuwa]8.2e-1437.19Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        ++F    IN +Y +K+  +  G+ + KNP  + L+EAL+     G +W++  T +  L P +L  E +VWL FIK  +MPT HD+ IS+ER MLLY I+ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEILPTIDLP
         + +N+G +I E +   +  P
Subjt:  GLEINIGSVIREEILPTIDLP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-1327.3Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        VS+S   IN V+ +  P+    ++ I+N + + L   L+ VA  G +WN S     T + S L P   VW HF+K++L+PTTH  T+S +R +LL+S++ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEI------------LPTIDLPLIGNLQQNNVQRKNKASTSHATPSLGLT------PTSPPQHTNISRP--TPSSEALAFTYCQLDCIE
        G  IN+G +I  EI             P++   L  N +   +  + K   +    ++ +       PT   Q  + SRP    S+        QL  +E
Subjt:  GLEINIGSVIREEI------------LPTIDLPLIGNLQQNNVQRKNKASTSHATPSLGLT------PTSPPQHTNISRP--TPSSEALAFTYCQLDCIE

Query:  DKL---------------------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE
         +L                     + +W Y+KERD A+ +   +      P FP FPQ +L   + E E E ++   + + E
Subjt:  DKL---------------------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.6e-1430.11Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        VS+S   IN V+ +  P+    ++ I+N +  +L   L+ VA  G +WN S     T + S L P   VW HF+K++L+PTTH   +S +R +LL+S++ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEI-------LPTIDLP-LIGNLQQN-----NVQRKNKASTSHATPSLGLT---PTSPPQHTNISRP--TPSSEALAFTYCQLDCIEDK
        G  IN+G +I  EI          +  P LI  L +N     N ++ +      A     +T   PT   Q  + SRP    SS        QL  +E +
Subjt:  GLEINIGSVIREEI-------LPTIDLP-LIGNLQQN-----NVQRKNKASTSHATPSLGLT---PTSPPQHTNISRP--TPSSEALAFTYCQLDCIEDK

Query:  L----------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE
        L          + +W Y+KERD A+ +   +      P FP FPQ +L   + E E E ++   + + E
Subjt:  L----------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]4.3e-1535.09Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        VSFS+ DIN +Y++K   +  GN +I +P+ +Q+++AL+++ + G++W+ S   V TL    L  E  +W++ +K +L+ TTHD T+S +R M  Y I++
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEI
         + I++G +I  ++
Subjt:  GLEINIGSVIREEI

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.6e-1436.04Show/hide
Query:  MVSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIM
        +V FS+ DIN +Y++K      GN +I +P  +++++AL+ + + G QW+ S   +KTL  S L PE  +W++ +K +++PT+HD T+S +R M  Y I 
Subjt:  MVSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIM

Query:  KGLEINIGSVI
         G+ I++  +I
Subjt:  KGLEINIGSVI

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)6.7e-1427.3Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        VS+S   IN V+ +  P+    ++ I+N + + L   L+ VA  G +WN S     T + S L P   VW HF+K++L+PTTH  T+S +R +LL+S++ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEI------------LPTIDLPLIGNLQQNNVQRKNKASTSHATPSLGLT------PTSPPQHTNISRP--TPSSEALAFTYCQLDCIE
        G  IN+G +I  EI             P++   L  N +   +  + K   +    ++ +       PT   Q  + SRP    S+        QL  +E
Subjt:  GLEINIGSVIREEI------------LPTIDLPLIGNLQQNNVQRKNKASTSHATPSLGLT------PTSPPQHTNISRP--TPSSEALAFTYCQLDCIE

Query:  DKL---------------------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE
         +L                     + +W Y+KERD A+ +   +      P FP FPQ +L   + E E E ++   + + E
Subjt:  DKL---------------------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE

A0A2P5CPE8 Uncharacterized protein1.5e-1337.72Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        V  S+  IN +Y +  P+    ++ ++  +  +L   L+ VA  G +WN S     T + S L P   VW HF+K++L+PTTH  T+S ER +LLYS++ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEI
        G  IN+G +I  EI
Subjt:  GLEINIGSVIREEI

A0A2P5DXM3 Uncharacterized protein8.0e-1530.11Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        VS+S   IN V+ +  P+    ++ I+N +  +L   L+ VA  G +WN S     T + S L P   VW HF+K++L+PTTH   +S +R +LL+S++ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEI-------LPTIDLP-LIGNLQQN-----NVQRKNKASTSHATPSLGLT---PTSPPQHTNISRP--TPSSEALAFTYCQLDCIEDK
        G  IN+G +I  EI          +  P LI  L +N     N ++ +      A     +T   PT   Q  + SRP    SS        QL  +E +
Subjt:  GLEINIGSVIREEI-------LPTIDLP-LIGNLQQN-----NVQRKNKASTSHATPSLGLT---PTSPPQHTNISRP--TPSSEALAFTYCQLDCIEDK

Query:  L----------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE
        L          + +W Y+KERD A+ +   +      P FP FPQ +L   + E E E ++   + + E
Subjt:  L----------KTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQALLPQEEEESEDEDEEVEESSSEE

A0A5A7TZE0 Protein MNN4-like1.7e-1240.17Show/hide
Query:  MVSFSSVDINRVYRIKSPL--HPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYS
        MV+F    +N +Y ++     +P    + K PS   ++ AL+ VA  G++W+ +  K   L P +LK   +VWL FIK  LMPT HD+TIS+ER MLLY 
Subjt:  MVSFSSVDINRVYRIKSPL--HPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYS

Query:  IMKGLEINIGSVIREEI
        IM+ + +N+  +I E I
Subjt:  IMKGLEINIGSVIREEI

A0A5A7U0U4 Uncharacterized protein3.9e-1437.19Show/hide
Query:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK
        ++F    IN +Y +K+  +  G+ + KNP  + L+EAL+     G +W++  T +  L P +L  E +VWL FIK  +MPT HD+ IS+ER MLLY I+ 
Subjt:  VSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMK

Query:  GLEINIGSVIREEILPTIDLP
         + +N+G +I E +   +  P
Subjt:  GLEINIGSVIREEILPTIDLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGTTTTTCTTCGGTTGACATTAACAGGGTATATCGGATCAAATCTCCTTTGCATCCGAGAGGGAACGATGTCATTAAGAACCCTTCGGCCAAGCAGTTAAAAGA
AGCATTGAAGATAGTGGCCAGGAAGGGAGTCCAGTGGAATGAGTCTCAAACCAAAGTGAAGACACTAGTGCCAAGTGACTTAAAGCCAGAACCGGCAGTGTGGCTTCACT
TCATCAAAAATAAATTGATGCCCACCACCCATGATAGTACCATTTCAGTAGAGAGGGCTATGCTTCTCTACAGCATCATGAAAGGGTTGGAGATCAATATAGGGAGCGTC
ATCAGAGAAGAGATCCTGCCCACTATTGACTTGCCTCTGATAGGGAACCTCCAACAAAACAATGTTCAAAGGAAGAATAAGGCTTCCACATCCCATGCTACTCCATCTCT
GGGGTTGACACCTACTTCACCTCCACAGCACACTAATATTTCAAGGCCTACACCATCATCAGAGGCCCTTGCATTTACCTACTGCCAGCTAGACTGCATTGAAGATAAAC
TGAAAACATATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGTGAGTTCTATCTCTCTATCACCCCGAGCATCGCTCCTTTTTTCCCTGACTTCCCTCAAGCCTTG
TTGCCTCAAGAAGAAGAAGAGTCTGAAGATGAAGATGAAGAAGTTGAAGAAAGTTCCTCAGAGGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAGTTTTTCTTCGGTTGACATTAACAGGGTATATCGGATCAAATCTCCTTTGCATCCGAGAGGGAACGATGTCATTAAGAACCCTTCGGCCAAGCAGTTAAAAGA
AGCATTGAAGATAGTGGCCAGGAAGGGAGTCCAGTGGAATGAGTCTCAAACCAAAGTGAAGACACTAGTGCCAAGTGACTTAAAGCCAGAACCGGCAGTGTGGCTTCACT
TCATCAAAAATAAATTGATGCCCACCACCCATGATAGTACCATTTCAGTAGAGAGGGCTATGCTTCTCTACAGCATCATGAAAGGGTTGGAGATCAATATAGGGAGCGTC
ATCAGAGAAGAGATCCTGCCCACTATTGACTTGCCTCTGATAGGGAACCTCCAACAAAACAATGTTCAAAGGAAGAATAAGGCTTCCACATCCCATGCTACTCCATCTCT
GGGGTTGACACCTACTTCACCTCCACAGCACACTAATATTTCAAGGCCTACACCATCATCAGAGGCCCTTGCATTTACCTACTGCCAGCTAGACTGCATTGAAGATAAAC
TGAAAACATATTGGGTCTATGCGAAGGAAAGAGATGAAGCAATTAGTGAGTTCTATCTCTCTATCACCCCGAGCATCGCTCCTTTTTTCCCTGACTTCCCTCAAGCCTTG
TTGCCTCAAGAAGAAGAAGAGTCTGAAGATGAAGATGAAGAAGTTGAAGAAAGTTCCTCAGAGGAGGAATAA
Protein sequenceShow/hide protein sequence
MVSFSSVDINRVYRIKSPLHPRGNDVIKNPSAKQLKEALKIVARKGVQWNESQTKVKTLVPSDLKPEPAVWLHFIKNKLMPTTHDSTISVERAMLLYSIMKGLEINIGSV
IREEILPTIDLPLIGNLQQNNVQRKNKASTSHATPSLGLTPTSPPQHTNISRPTPSSEALAFTYCQLDCIEDKLKTYWVYAKERDEAISEFYLSITPSIAPFFPDFPQAL
LPQEEEESEDEDEEVEESSSEEE