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Spg035062 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035062
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationscaffold6:27290536..27291821
RNA-Seq ExpressionSpg035062
SyntenySpg035062
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]8.9e-1462.71Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVD  V+KLFF++E+GVNP IP+LAET R+LNYC++   GKL CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

KAA0037618.1 uncharacterized protein E6C27_scaffold277G002790 [Cucumis melo var. makuwa]1.2e-1362.71Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVD  V+KLFF +E+GVNP IP+LAET R+LNYC++   GKL CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]1.2e-1361.02Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVDG V+KLFF +E+GVNP IP+LA+T R+LNYC++   GK  CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]3.0e-1462.71Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVDG V+KLFF +E+GVNP IP+LAET R+LNYC++   GKL CC+PLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]8.9e-1461.02Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVDG V++LFF IE+GV+P IP+LAET R+LN+C++   GKL CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

TrEMBL top hitse value%identityAlignment
A0A5A7T494 Uncharacterized protein5.6e-1462.71Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVD  V+KLFF +E+GVNP IP+LAET R+LNYC++   GKL CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

A0A5A7T5S7 Girdin-like4.3e-1462.71Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVD  V+KLFF++E+GVNP IP+LAET R+LNYC++   GKL CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

A0A5A7UL51 Girdin-like5.6e-1461.02Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVDG V+KLFF +E+GVNP IP+LA+T R+LNYC++   GK  CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

A0A5A7UWQ6 Uncharacterized protein1.5e-1462.71Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVDG V+KLFF +E+GVNP IP+LAET R+LNYC++   GKL CC+PLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

A0A5D3C8D9 Girdin-like1.1e-1259.32Show/hide
Query:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI
        V++P+ +GYVDG V+KLFF +E+GVNP IP+LA+T R+LNY ++   GK  CCVPLL I
Subjt:  VLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLAETVRALNYCKSNKGGKLRCCVPLLLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCCAATGTACCCATAGAGTCGATACAGTCATCATCCTCTGAATATGATGAGCTGAGTACTGTGCTACAATGGGCAGAGCAGACACAACTGAAACATGAGGATAG
TCTGCCTTATAAAAGCATCGGGTCATCATCCTTCTCAAGTCAAGTTCAAATCATTCCTAATGAGCTAGTGGAGCTGAAGGCTATTTGGGAAGGTTTAACACTAGAGCGAA
GATTTCTGATGGTCTTGTATCCCAGAGTAAAAGGATATGTGGATGGCGATGTCTTGAAGCTCTTCTTCAGGATTGAACAAGGGGTGAATCCAACCATACCTCTTCTGGCA
GAAACAGTTCGGGCGCTCAATTATTGTAAGTCCAATAAAGGCGGGAAACTGAGATGTTGTGTCCCCTTACTGTTAATTGAGCTTAGGCCGTGTCGGGAGCCGATCGCGCT
AATTGGTGTTAATTTGGGCCAATTACGGAGTTTTTGGAGCCATATCGATGTCTTGGACGGCAAGGAGGTGAAGAGACCCAATTGTGCTAAAGCGGGCCTGAATTTTGGCA
CCGAAAGCCAAAGATTGAAGCCCCAAACCGAGAAGAAGCGAGCCCAAGCCGAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCCAATGTACCCATAGAGTCGATACAGTCATCATCCTCTGAATATGATGAGCTGAGTACTGTGCTACAATGGGCAGAGCAGACACAACTGAAACATGAGGATAG
TCTGCCTTATAAAAGCATCGGGTCATCATCCTTCTCAAGTCAAGTTCAAATCATTCCTAATGAGCTAGTGGAGCTGAAGGCTATTTGGGAAGGTTTAACACTAGAGCGAA
GATTTCTGATGGTCTTGTATCCCAGAGTAAAAGGATATGTGGATGGCGATGTCTTGAAGCTCTTCTTCAGGATTGAACAAGGGGTGAATCCAACCATACCTCTTCTGGCA
GAAACAGTTCGGGCGCTCAATTATTGTAAGTCCAATAAAGGCGGGAAACTGAGATGTTGTGTCCCCTTACTGTTAATTGAGCTTAGGCCGTGTCGGGAGCCGATCGCGCT
AATTGGTGTTAATTTGGGCCAATTACGGAGTTTTTGGAGCCATATCGATGTCTTGGACGGCAAGGAGGTGAAGAGACCCAATTGTGCTAAAGCGGGCCTGAATTTTGGCA
CCGAAAGCCAAAGATTGAAGCCCCAAACCGAGAAGAAGCGAGCCCAAGCCGAGAAATAG
Protein sequenceShow/hide protein sequence
MNANVPIESIQSSSSEYDELSTVLQWAEQTQLKHEDSLPYKSIGSSSFSSQVQIIPNELVELKAIWEGLTLERRFLMVLYPRVKGYVDGDVLKLFFRIEQGVNPTIPLLA
ETVRALNYCKSNKGGKLRCCVPLLLIELRPCREPIALIGVNLGQLRSFWSHIDVLDGKEVKRPNCAKAGLNFGTESQRLKPQTEKKRAQAEK