; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035067 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035067
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionupstream activation factor subunit UAF30
Genome locationscaffold6:27208231..27210991
RNA-Seq ExpressionSpg035067
SyntenySpg035067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603170.1 hypothetical protein SDJN03_03779, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022928748.1 upstream activation factor subunit UAF30 [Cucurbita moschata]3.4e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022967913.1 protein TRI1 isoform X1 [Cucurbita maxima]5.9e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_022967914.1 upstream activation factor subunit UAF30 isoform X2 [Cucurbita maxima]5.9e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

XP_038882021.1 upstream activation factor subunit spp27 [Benincasa hispida]2.4e-3859.75Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLP+R+K  ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

TrEMBL top hitse value%identityAlignment
A0A151SBL4 Upstream activation factor subunit UAF307.0e-3655.97Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+K  ITDNPKKLANLIDL+NLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DP NKNVV CDEKLKSILLGKP+V+LAELPALIK+HFPK PK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A1S3BL41 upstream activation factor subunit spp271.8e-3657.23Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        M  +R+K  +TDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFKCVWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVV+CDEKLKSILLGKPKVELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1ELR1 upstream activation factor subunit UAF301.7e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKLKSILLGK K+ELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1HWJ0 protein TRI1 isoform X12.8e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

A0A6J1HY33 upstream activation factor subunit UAF30 isoform X22.8e-3759.12Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQR+KT ITDNPKKLANLIDLVNLPSTLR+FVGQSQISRLGCFK VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DPTNKNVVICDEKL+SILLGK KVELAELPALIKLHFPKNPK
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein1.4e-0445.24Show/hide
Query:  MKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN
        +++P NK  + CD+KLK+I  GK KV + E+  L+  HFPK+
Subjt:  MKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.1e-0623.91Show/hide
Query:  LIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGEVKISLKTQDERGSPEMKDP
        ++ +V +   L +F+G++++SR    K +W YIK NNLQ                                                           +P
Subjt:  LIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGEVKISLKTQDERGSPEMKDP

Query:  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN
         NK  ++CDE+LK+I  GK  V   E+  L+  HFPK+
Subjt:  TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKN

AT4G26810.1 SWIB/MDM2 domain superfamily protein1.2e-3554.09Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRLGCF  VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DP NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

AT4G26810.2 SWIB/MDM2 domain superfamily protein1.2e-3554.09Show/hide
Query:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE
        MLPQRLK  ITDNPKKL NLIDLVNLPSTLR+FVGQSQISRLGCF  VWSYIKTNNLQ                                          
Subjt:  MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGE

Query:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK
                         DP NKNVVICDEKLKSILLGK +VEL +LP+LIKLHFPK  K
Subjt:  VKISLKTQDERGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK

AT4G34290.1 SWIB/MDM2 domain superfamily protein5.3e-0447.5Show/hide
Query:  EMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHF
        +++DP NK  ++CDEKLK I  GK +V   E+  LI  HF
Subjt:  EMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCCACAACGGTTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTC
CCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGTATAGTTTAAAAAGGAGAGGAGGAAGAGGGATAAAAGGAAAAGAGC
AATCAAAGAGGAGAAGAAAGATCTGTAGGAGGACATCATTGGAATTAGGTAAAGGCAGATATCATGCAACAACAGGGGAAGTGAAGATAAGTCTGAAGACTCAGGATGAA
AGAGGATCTCCTGAAATGAAAGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCC
TGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCCACAACGGTTGAAGACGACCATTACAGATAACCCAAAGAAGCTTGCCAACTTGATTGATCTCGTAAACCTTCCTTCAACTCTCAGAGACTTTGTGGGACAGTC
CCAAATTTCTCGTCTGGGCTGTTTCAAATGTGTGTGGTCTTATATCAAAACCAACAATCTTCAGTATAGTTTAAAAAGGAGAGGAGGAAGAGGGATAAAAGGAAAAGAGC
AATCAAAGAGGAGAAGAAAGATCTGTAGGAGGACATCATTGGAATTAGGTAAAGGCAGATATCATGCAACAACAGGGGAAGTGAAGATAAGTCTGAAGACTCAGGATGAA
AGAGGATCTCCTGAAATGAAAGATCCGACCAACAAGAATGTGGTCATTTGTGATGAGAAGTTAAAGAGTATCTTGCTAGGCAAGCCCAAGGTCGAGCTAGCCGAACTTCC
TGCCCTGATTAAATTACATTTCCCCAAAAACCCCAAGTGA
Protein sequenceShow/hide protein sequence
MLPQRLKTTITDNPKKLANLIDLVNLPSTLRDFVGQSQISRLGCFKCVWSYIKTNNLQYSLKRRGGRGIKGKEQSKRRRKICRRTSLELGKGRYHATTGEVKISLKTQDE
RGSPEMKDPTNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNPK