| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 1.4e-24 | 45.62 | Show/hide |
Query: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
EQ K ++W + F ++ R + F + + +++V Q Y+ L TLSVLRDNDAVVEIELPVPDTLPTSAES ++SSTW+ELY ES
Subjt: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
Query: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
VH+ + +G + DDV WLHA+FRAK AGGPGGGVT + Q+S
Subjt: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.4e-24 | 63.73 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+ ++++FSV G + DDV WLHA+FRAK GGPGGG
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| TYK17971.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 1.4e-24 | 45.62 | Show/hide |
Query: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
EQ K ++W + F ++ R + F + + +++V Q Y+ L TLSVLRDNDAVVEIELPVPDTLPTSAES ++SSTW+ELY ES
Subjt: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
Query: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
VH+ + +G + DDV WLHA+FRAK AGGPGGGVT + Q+S
Subjt: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 8.8e-24 | 63.64 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQVS----------LEEDDVRWLHAIFRAKLAGGPGGGVT
PL TLSVLRDNDAVVEIELP+PDTLPTSAESS ++SSTW+ELY ESVH+ + + + + S + DDV WLHAIFRAK AGGPGGGVT
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQVS----------LEEDDVRWLHAIFRAKLAGGPGGGVT
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-24 | 63.73 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+ ++++FSV G + DDV WLHA+FRAK GGPGGG
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 4.3e-24 | 63.64 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQVS----------LEEDDVRWLHAIFRAKLAGGPGGGVT
PL TLSVLRDNDAVVEIELP+PDTLPTSAESS ++SSTW+ELY ESVH+ + + + + S + DDV WLHAIFRAK AGGPGGGVT
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHIVNVLFSVQEGQQVS----------LEEDDVRWLHAIFRAKLAGGPGGGVT
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| A0A5A7TKT0 Reverse transcriptase | 6.6e-25 | 45.62 | Show/hide |
Query: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
EQ K ++W + F ++ R + F + + +++V Q Y+ L TLSVLRDNDAVVEIELPVPDTLPTSAES ++SSTW+ELY ES
Subjt: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
Query: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
VH+ + +G + DDV WLHA+FRAK AGGPGGGVT + Q+S
Subjt: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
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| A0A5A7V9N3 Reverse transcriptase | 6.6e-25 | 63.73 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+ ++++FSV G + DDV WLHA+FRAK GGPGGG
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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| A0A5D3D150 Reverse transcriptase | 6.6e-25 | 45.62 | Show/hide |
Query: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
EQ K ++W + F ++ R + F + + +++V Q Y+ L TLSVLRDNDAVVEIELPVPDTLPTSAES ++SSTW+ELY ES
Subjt: EQSKPKYAAW---IEFRAQDFRAKQEDLWFPLVFRAFWVVQVESEAQFGYI---PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIES
Query: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
VH+ + +G + DDV WLHA+FRAK AGGPGGGVT + Q+S
Subjt: VHIVNVLFSVQEGQQ-----------VSLEEDDVRWLHAIFRAKLAGGPGGGVTIWYQSS
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| A0A5D3DSY7 Putative Retrotransposon protein | 6.6e-25 | 63.73 | Show/hide |
Query: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
PL TLSVLRDNDAVVEIELPVPDTLPTSAESS ++SSTW+ELY ESVH+ ++++FSV G + DDV WLHA+FRAK GGPGGG
Subjt: PLLTLSVLRDNDAVVEIELPVPDTLPTSAESSRTSSSTWVELYIESVHI-------------VNVLFSVQEGQQVSLEEDDVRWLHAIFRAKLAGGPGGG
Query: VT
VT
Subjt: VT
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