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Spg035231 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035231
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationscaffold7:23908068..23915892
RNA-Seq ExpressionSpg035231
SyntenySpg035231
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]1.3e-1033.08Show/hide
Query:  HVWILNHNFLPGCGFHEAENMPY-FLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVK
        H  ++N   +P  G  E   +PY  +   I +  W Q   +PD  +V ++ + Y N+ E  V     + GA+W++S  E  +F+   +K E   WL FV 
Subjt:  HVWILNHNFLPGCGFHEAENMPY-FLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVK

Query:  QRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
         RLL +TH   V++DR +L+++I+   +IDVGK
Subjt:  QRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]6.8e-0740.51Show/hide
Query:  DNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
        D+ D   +I  + I GA+W++S  E  +F+   +K E   WL FV  RLLP+TH   V++DR +L+++I+   +IDVGK
Subjt:  DNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]1.8e-0725.13Show/hide
Query:  PTYERFVNDGARKNHVWILNHN--FLPGCGFHEAE--NMPYFLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDE------------------------
        P+   FV++ A++++  I N    F  G  F EAE  N+   +   +T H W++    P PV   I+ + Y NI E                        
Subjt:  PTYERFVNDGARKNHVWILNHN--FLPGCGFHEAE--NMPYFLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDE------------------------

Query:  ---------------------QGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
                             QG+++++ + G  W   + + +T     L      W  F+K +L+PT+H+  VS  R+LL+ SIL    ID+GK
Subjt:  ---------------------QGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.3e-0545.83Show/hide
Query:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
        V++ V I GAEW  S   A T     L   A  W  F+K RLLPTTH   VS++RVLL++S+L   +I+VG+
Subjt:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

PON71279.1 hypothetical protein PanWU01x14_074190, partial [Parasponia andersonii]7.5e-0643.06Show/hide
Query:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
        V++ + + GAEW  S  +A       L   AN W  F+K RLLPTTH   VS++RVLL++S+L   +I+VG+
Subjt:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein6.4e-1133.08Show/hide
Query:  HVWILNHNFLPGCGFHEAENMPY-FLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVK
        H  ++N   +P  G  E   +PY  +   I +  W Q   +PD  +V ++ + Y N+ E  V     + GA+W++S  E  +F+   +K E   WL FV 
Subjt:  HVWILNHNFLPGCGFHEAENMPY-FLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVK

Query:  QRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
         RLL +TH   V++DR +L+++I+   +IDVGK
Subjt:  QRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

A0A061FAJ6 Uncharacterized protein3.3e-0740.51Show/hide
Query:  DNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
        D+ D   +I  + I GA+W++S  E  +F+   +K E   WL FV  RLLP+TH   V++DR +L+++I+   +IDVGK
Subjt:  DNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

A0A2P5CPE8 Uncharacterized protein6.2e-0645.83Show/hide
Query:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
        V++ V I GAEW  S   A T     L   A  W  F+K RLLPTTH   VS++RVLL++S+L   +I+VG+
Subjt:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

A0A2P5DDA9 Uncharacterized protein (Fragment)3.6e-0643.06Show/hide
Query:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
        V++ + + GAEW  S  +A       L   AN W  F+K RLLPTTH   VS++RVLL++S+L   +I+VG+
Subjt:  VIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

A0A6A2ZUE4 Uncharacterized protein8.6e-0825.13Show/hide
Query:  PTYERFVNDGARKNHVWILNHN--FLPGCGFHEAE--NMPYFLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDE------------------------
        P+   FV++ A++++  I N    F  G  F EAE  N+   +   +T H W++    P PV   I+ + Y NI E                        
Subjt:  PTYERFVNDGARKNHVWILNHN--FLPGCGFHEAE--NMPYFLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDE------------------------

Query:  ---------------------QGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK
                             QG+++++ + G  W   + + +T     L      W  F+K +L+PT+H+  VS  R+LL+ SIL    ID+GK
Subjt:  ---------------------QGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRDRVLLVFSILRSLNIDVGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCAACGCGTTCATGTAGTGGACATGCAAGTCGGGGTATCCTGTGCAATGAGTTTGCATAAGACTGGACCGCGAGATAGAATGATTGATGAGAAAAATGGGCACCA
AGGGAGGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGATGCTGTGACGTCACGCGACTTGTTGGCCAAGAAATGGGACAGCGTCTCGACGCTATGCGGATTTCAGA
CCAGTGAGTGTGGATTTGGGCTTCGATCTTGGACCAACTTCAATTCTTTTTGGACCTCTTCTTCATGGTTGACTTCATGGGCTCCCCCTTTGACCCATGACAACTTCGTC
TCAATCCTGAGTGGGTTATGGACTCCTGTTCACGAGGGATTGTCCTTTGATTTGTATGGGAAAAGGCGAATCTCGATCAAGGCTTCTATGGTAATTACTCTTTATGAGCT
AGCAATGAGACCTAATGGACCAACAGATCAGAAGCTCCAACGATACGAGGACATAAAACCCAACAAAGCTCTAGCAAAAGAGATTGAGACAGAGGAGGCCCGCCCTGAAG
AGGAAAAAGATCAAGAGGTTAAAAAAGGAAAAGGTGTGGTGGAAGGAGAAGAAAGACCGACGTATGAAAGGTTTGTGAATGATGGGGCAAGGAAAAATCACGTATGGATC
CTGAATCATAACTTTTTGCCTGGGTGCGGATTTCATGAGGCAGAGAATATGCCATATTTTCTAAGAGGAAGAATTACTAATCATGGATGGGAGCAACTTTTTTCAAAGCC
TGATCCAGTGATTGTGCAGATAATTTGTCAGATTTATGATAATATTGATGAGCAAGGAGTGATAAAAGAAGTGGGAATTAATGGAGCAGAATGGAGGTCGTCAAGAACAG
AGGCTAGAACCTTCCAATCTCCATATTTGAAGTATGAGGCTAACACATGGCTAGTATTTGTGAAGCAACGCTTACTGCCAACCACCCATGACTTAAGGGTTTCGAGGGAC
AGAGTGTTGCTTGTCTTTTCTATCTTAAGATCATTGAACATTGATGTAGGGAAAAGCGAGAAGAACCAGCGCAGCAAGGAGGACTCCTCTATGGAGTGCATAGCTTGTTG
GAGCAATAAGATCTTGAGTAGATTAGAGATTCAGAAGCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCCAACGCGTTCATGTAGTGGACATGCAAGTCGGGGTATCCTGTGCAATGAGTTTGCATAAGACTGGACCGCGAGATAGAATGATTGATGAGAAAAATGGGCACCA
AGGGAGGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGATGCTGTGACGTCACGCGACTTGTTGGCCAAGAAATGGGACAGCGTCTCGACGCTATGCGGATTTCAGA
CCAGTGAGTGTGGATTTGGGCTTCGATCTTGGACCAACTTCAATTCTTTTTGGACCTCTTCTTCATGGTTGACTTCATGGGCTCCCCCTTTGACCCATGACAACTTCGTC
TCAATCCTGAGTGGGTTATGGACTCCTGTTCACGAGGGATTGTCCTTTGATTTGTATGGGAAAAGGCGAATCTCGATCAAGGCTTCTATGGTAATTACTCTTTATGAGCT
AGCAATGAGACCTAATGGACCAACAGATCAGAAGCTCCAACGATACGAGGACATAAAACCCAACAAAGCTCTAGCAAAAGAGATTGAGACAGAGGAGGCCCGCCCTGAAG
AGGAAAAAGATCAAGAGGTTAAAAAAGGAAAAGGTGTGGTGGAAGGAGAAGAAAGACCGACGTATGAAAGGTTTGTGAATGATGGGGCAAGGAAAAATCACGTATGGATC
CTGAATCATAACTTTTTGCCTGGGTGCGGATTTCATGAGGCAGAGAATATGCCATATTTTCTAAGAGGAAGAATTACTAATCATGGATGGGAGCAACTTTTTTCAAAGCC
TGATCCAGTGATTGTGCAGATAATTTGTCAGATTTATGATAATATTGATGAGCAAGGAGTGATAAAAGAAGTGGGAATTAATGGAGCAGAATGGAGGTCGTCAAGAACAG
AGGCTAGAACCTTCCAATCTCCATATTTGAAGTATGAGGCTAACACATGGCTAGTATTTGTGAAGCAACGCTTACTGCCAACCACCCATGACTTAAGGGTTTCGAGGGAC
AGAGTGTTGCTTGTCTTTTCTATCTTAAGATCATTGAACATTGATGTAGGGAAAAGCGAGAAGAACCAGCGCAGCAAGGAGGACTCCTCTATGGAGTGCATAGCTTGTTG
GAGCAATAAGATCTTGAGTAGATTAGAGATTCAGAAGCGTTAG
Protein sequenceShow/hide protein sequence
MIQRVHVVDMQVGVSCAMSLHKTGPRDRMIDEKNGHQGRPYIGPEIGQRRDAVTSRDLLAKKWDSVSTLCGFQTSECGFGLRSWTNFNSFWTSSSWLTSWAPPLTHDNFV
SILSGLWTPVHEGLSFDLYGKRRISIKASMVITLYELAMRPNGPTDQKLQRYEDIKPNKALAKEIETEEARPEEEKDQEVKKGKGVVEGEERPTYERFVNDGARKNHVWI
LNHNFLPGCGFHEAENMPYFLRGRITNHGWEQLFSKPDPVIVQIICQIYDNIDEQGVIKEVGINGAEWRSSRTEARTFQSPYLKYEANTWLVFVKQRLLPTTHDLRVSRD
RVLLVFSILRSLNIDVGKSEKNQRSKEDSSMECIACWSNKILSRLEIQKR