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Spg035239 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035239
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:24585670..24587797
RNA-Seq ExpressionSpg035239
SyntenySpg035239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]1.0e-0926.01Show/hide
Query:  DTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNVVVLLAVARTEA-----------------------KWDDHGAAR-T
        D ++  KW+    +  S   +LV +FY   ++     + VRG  + F+S  +N+   L  V    A                       +W+    +R +
Subjt:  DTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNVVVLLAVARTEA-----------------------KWDDHGAAR-T

Query:  LKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
        +  + L   A  W H++KN++MPT+H+ T+SL R++L++ IM   PID+G I+V  +     K   ++  P L
Subjt:  LKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]7.0e-1128.5Show/hide
Query:  ERGFSCALPQTM------TDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV-----------------------VVL
        E+GF     +TM         I+Q  W+  C +       LV +FY      E + V VRG  V++S   +N V                        VL
Subjt:  ERGFSCALPQTM------TDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV-----------------------VVL

Query:  LAVARTEAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
          VA   A+W+    GA   +++ L    A  W H++K+R++PTTH  T+S  R++L++ ++ G  I++GR++   +R  AA+  G++F P L
Subjt:  LAVARTEAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]2.7e-1028.73Show/hide
Query:  SCALPQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMN-------------------------NVVVLLAVARTEA
        S A P  + D I+Q      C +       LV +FY      E D V V G  V  S   +N                          V+  +AVAR E+
Subjt:  SCALPQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMN-------------------------NVVVLLAVARTEA

Query:  KWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCP
            H A   +++  L+  A  W H++++R++PTTH   +S   V+L+Y I+ G  I++GRI+ D +   AA+  G++F P
Subjt:  KWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCP

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.2e-1129.05Show/hide
Query:  PQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNN-----------------------VVVLLAVARTEAKWD--D
        P  + D I Q  W+  C +       LV +FY      + D V +RG  V  S   +N                        V+VL  VA   A+W+   
Subjt:  PQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNN-----------------------VVVLLAVARTEAKWD--D

Query:  HGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
         GA   L++  L+  A  W H++K+R++PTTH  T+S + V L+Y ++ G  I++GR++   +   AA+  G++F P L
Subjt:  HGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]6.4e-1226.46Show/hide
Query:  ERGFSCALPQTMTD---TISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV------------------------VVLLA
        ++GFS  L     D    I    WET+C+    Y  + V +F       +  ++ VR   V++S   +N++                        ++L  
Subjt:  ERGFSCALPQTMTD---TISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV------------------------VVLLA

Query:  VARTEAKWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
        VA     W   G AR LK Q L  EA  W +++++ I P +HD  L L+RV+++YCI++  P D+GR++   ++    +  G +  P L
Subjt:  VARTEAKWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.1e-0927.46Show/hide
Query:  ERGFSCALPQTM------TDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV-----------------------VVL
        E+GF     +TM         I+Q  W+  C +       LV +FY        + V VRG  V++S   +N V                        VL
Subjt:  ERGFSCALPQTM------TDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV-----------------------VVL

Query:  LAVARTEAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
          VA   A+W+    GA   +++ L    A  W H++K+ ++PTTH  T+S  R++L++ ++ G  I++GR++   +R  AA+  G++F P L
Subjt:  LAVARTEAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

A0A2P5BCG4 Uncharacterized protein (Fragment)3.4e-1128.5Show/hide
Query:  ERGFSCALPQTM------TDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV-----------------------VVL
        E+GF     +TM         I+Q  W+  C +       LV +FY      E + V VRG  V++S   +N V                        VL
Subjt:  ERGFSCALPQTM------TDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNV-----------------------VVL

Query:  LAVARTEAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
          VA   A+W+    GA   +++ L    A  W H++K+R++PTTH  T+S  R++L++ ++ G  I++GR++   +R  AA+  G++F P L
Subjt:  LAVARTEAKWD--DHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

A0A2P5BCT7 Uncharacterized protein (Fragment)1.3e-1028.73Show/hide
Query:  SCALPQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMN-------------------------NVVVLLAVARTEA
        S A P  + D I+Q      C +       LV +FY      E D V V G  V  S   +N                          V+  +AVAR E+
Subjt:  SCALPQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMN-------------------------NVVVLLAVARTEA

Query:  KWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCP
            H A   +++  L+  A  W H++++R++PTTH   +S   V+L+Y I+ G  I++GRI+ D +   AA+  G++F P
Subjt:  KWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCP

A0A2P5DAQ2 Uncharacterized protein1.5e-1129.05Show/hide
Query:  PQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNN-----------------------VVVLLAVARTEAKWD--D
        P  + D I Q  W+  C +       LV +FY      + D V +RG  V  S   +N                        V+VL  VA   A+W+   
Subjt:  PQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNN-----------------------VVVLLAVARTEAKWD--D

Query:  HGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
         GA   L++  L+  A  W H++K+R++PTTH  T+S + V L+Y ++ G  I++GR++   +   AA+  G++F P L
Subjt:  HGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

A0A6A2WM54 Uncharacterized protein4.9e-1026.01Show/hide
Query:  DTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNVVVLLAVARTEA-----------------------KWDDHGAAR-T
        D ++  KW+    +  S   +LV +FY   ++     + VRG  + F+S  +N+   L  V    A                       +W+    +R +
Subjt:  DTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVLVRGHAVAFSSACMNNVVVLLAVARTEA-----------------------KWDDHGAAR-T

Query:  LKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
        +  + L   A  W H++KN++MPT+H+ T+SL R++L++ IM   PID+G I+V  +     K   ++  P L
Subjt:  LKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGCTGCAACATCCAGCCAACGGGGGTAGTCATTCGAGAGCCCTCTGAAAGACCTGCGGCGACCCCAAGCAAGAAAAGGAAAGCGCCCACCGCGTCCAAAGGCAA
AGGAAAAGGAAAAGTGGGCGCATGCAAAAACAAGATGGGTGAGGACTGGGGGAAGTTTCAAGAAGAAAGAGGTTTCAGCTGCGCCCTCCCACAAACGATGACAGATACAA
TTTCCCAATGCAAGTGGGAAACGGTCTGTGAAAATCATCGCTCCTACGCCCCTGCGCTAGTCCATGACTTCTACCGAGCGCAATGGCAAGACGAAATCGACAAAGTCTTG
GTTCGAGGCCACGCAGTCGCATTCTCCTCTGCATGCATGAACAATGTCGTAGTACTACTTGCGGTGGCCAGAACTGAGGCCAAATGGGACGACCATGGAGCTGCGAGGAC
ACTAAAGGCGCAGCTGTTGGATTTTGAGGCCACCTGCTGGATGCACTGGGTGAAGAATCGCATCATGCCCACAACACATGATGCCACATTGAGCCTTCAACGGGTGGTTC
TCGTCTATTGCATCATGAAGGGAACCCCAATCGACTTAGGCCGAATCCTTGTCGACACATTGCGCCAGACTGCAGCAAAACCAAAGGGCTCAATGTTTTGTCCTGGCCTT
TGGGCGCCCGTAACCAGCACCCACAATAGGCGTCTGCAAGGAAGCACGCAGCAACCAGATCCCGAATCGCAACCCTTCGAACCTGCACCTGCGCCTGAAGCACAAAAGAA
AAAAAGGCGCAAGCAAACTGCGGGCAGAAACCCACCACCAGTCGCAAGGATCCATAAATCGACTCCACCAGCACAGGAAAGCACTGTCTGCGCCCAACCTCAAGGATCCT
TGTCACCACAACCACCGCAACCAACTGTCCAACAAACACCTCCTCCGCCGAACAACGAAGACTTGAGTTCAGAGGAGATTTTTGAAGCCTCATTCCCTAGCCCTCCTCGC
AATGATGAGGTCCCTGCGCCAACCCCCACGCTGCAAGTCACAGCTTCTACGAACGCAAGTCAGGCTGCGGCTGATCCACAGTTTGATGTGGATACTGACGAACCATCAGT
AATTCTCAGTAATCCTGAAATAAGAAACTTACCTCCCTTCTACAATGGACGTAGGCCTAGTTGCCGAACCACTTTACATCCTTGTGTCGTCTTTGTTTCATTCTTCTTCT
TCTTCCTTGATCGCGCTTACTTTGTCTGTGAGTATGAGTGTCTTCTTCGCAAGCCTACAGAATTCTATCTCTTTGAGATTTGTCTTGATCTTCATGTTCGAATGAAAGTG
CATGTATTAGCTGCACGGAAGAATTCAACTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGCTGCAACATCCAGCCAACGGGGGTAGTCATTCGAGAGCCCTCTGAAAGACCTGCGGCGACCCCAAGCAAGAAAAGGAAAGCGCCCACCGCGTCCAAAGGCAA
AGGAAAAGGAAAAGTGGGCGCATGCAAAAACAAGATGGGTGAGGACTGGGGGAAGTTTCAAGAAGAAAGAGGTTTCAGCTGCGCCCTCCCACAAACGATGACAGATACAA
TTTCCCAATGCAAGTGGGAAACGGTCTGTGAAAATCATCGCTCCTACGCCCCTGCGCTAGTCCATGACTTCTACCGAGCGCAATGGCAAGACGAAATCGACAAAGTCTTG
GTTCGAGGCCACGCAGTCGCATTCTCCTCTGCATGCATGAACAATGTCGTAGTACTACTTGCGGTGGCCAGAACTGAGGCCAAATGGGACGACCATGGAGCTGCGAGGAC
ACTAAAGGCGCAGCTGTTGGATTTTGAGGCCACCTGCTGGATGCACTGGGTGAAGAATCGCATCATGCCCACAACACATGATGCCACATTGAGCCTTCAACGGGTGGTTC
TCGTCTATTGCATCATGAAGGGAACCCCAATCGACTTAGGCCGAATCCTTGTCGACACATTGCGCCAGACTGCAGCAAAACCAAAGGGCTCAATGTTTTGTCCTGGCCTT
TGGGCGCCCGTAACCAGCACCCACAATAGGCGTCTGCAAGGAAGCACGCAGCAACCAGATCCCGAATCGCAACCCTTCGAACCTGCACCTGCGCCTGAAGCACAAAAGAA
AAAAAGGCGCAAGCAAACTGCGGGCAGAAACCCACCACCAGTCGCAAGGATCCATAAATCGACTCCACCAGCACAGGAAAGCACTGTCTGCGCCCAACCTCAAGGATCCT
TGTCACCACAACCACCGCAACCAACTGTCCAACAAACACCTCCTCCGCCGAACAACGAAGACTTGAGTTCAGAGGAGATTTTTGAAGCCTCATTCCCTAGCCCTCCTCGC
AATGATGAGGTCCCTGCGCCAACCCCCACGCTGCAAGTCACAGCTTCTACGAACGCAAGTCAGGCTGCGGCTGATCCACAGTTTGATGTGGATACTGACGAACCATCAGT
AATTCTCAGTAATCCTGAAATAAGAAACTTACCTCCCTTCTACAATGGACGTAGGCCTAGTTGCCGAACCACTTTACATCCTTGTGTCGTCTTTGTTTCATTCTTCTTCT
TCTTCCTTGATCGCGCTTACTTTGTCTGTGAGTATGAGTGTCTTCTTCGCAAGCCTACAGAATTCTATCTCTTTGAGATTTGTCTTGATCTTCATGTTCGAATGAAAGTG
CATGTATTAGCTGCACGGAAGAATTCAACTAAGTGA
Protein sequenceShow/hide protein sequence
MHRCNIQPTGVVIREPSERPAATPSKKRKAPTASKGKGKGKVGACKNKMGEDWGKFQEERGFSCALPQTMTDTISQCKWETVCENHRSYAPALVHDFYRAQWQDEIDKVL
VRGHAVAFSSACMNNVVVLLAVARTEAKWDDHGAARTLKAQLLDFEATCWMHWVKNRIMPTTHDATLSLQRVVLVYCIMKGTPIDLGRILVDTLRQTAAKPKGSMFCPGL
WAPVTSTHNRRLQGSTQQPDPESQPFEPAPAPEAQKKKRRKQTAGRNPPPVARIHKSTPPAQESTVCAQPQGSLSPQPPQPTVQQTPPPPNNEDLSSEEIFEASFPSPPR
NDEVPAPTPTLQVTASTNASQAAADPQFDVDTDEPSVILSNPEIRNLPPFYNGRRPSCRTTLHPCVVFVSFFFFFLDRAYFVCEYECLLRKPTEFYLFEICLDLHVRMKV
HVLAARKNSTK