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Spg035246 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035246
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMannan endo-1,4-beta-mannosidase
Genome locationscaffold7:22344635..22345681
RNA-Seq ExpressionSpg035246
SyntenySpg035246
Gene Ontology termsGO:0071704 - organic substance metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016985 - mannan endo-1,4-beta-mannosidase activity (molecular function)
InterPro domainsIPR017853 - Glycoside hydrolase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646606.1 hypothetical protein Csa_005432 [Cucumis sativus]9.9e-5662.57Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------------------
        VV MSLRN +RG MEN NDWNNYVTQGVTTIHKI+PA+LVIVSGLNYDNDLRCLK+KPL V                                       
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------------------

Query:  --DDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
          D A FV+EGPN FPLFVSE+GYDQR  +DAEN FMSCFT HL QKDLDWALW+WQG+YYYREG+AE  E FGVLDSN
Subjt:  --DDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

KAE8646606.1 hypothetical protein Csa_005432 [Cucumis sativus]1.5e-0392.31Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV
        ML EGLNHRPLKELADEAIKL+FNCV
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV

KAE8646606.1 hypothetical protein Csa_005432 [Cucumis sativus]9.9e-5662.57Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------------------
        VV MSLRN +RG MEN NDWNNYVTQGVTTIHKI+PA+LVIVSGLNYDNDLRCLK+KPL V                                       
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------------------

Query:  --DDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
          D A FV+EGPN FPLFVSE+GYDQR  +DAEN FMSCFT HL QKDLDWALW+WQG+YYYREG+AE  E FGVLDSN
Subjt:  --DDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

XP_011658389.1 glycosyl hydrolase 5 family protein [Cucumis sativus]1.5e-0392.31Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV
        ML EGLNHRPLKELADEAIKL+FNCV
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV

XP_011658389.1 glycosyl hydrolase 5 family protein [Cucumis sativus]1.3e-5542.09Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV--------------------------------------------------------------------------
        ML EGLNHRPLKELADEAIKLKFNCV                                                                          
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV--------------------------------------------------------------------------

Query:  --------------------------------------VAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT---
                                              +AMSLRN IRGT EN NDWNNY+TQGVT +H  +P +LVIVSGLN+DNDLRCLKEKPL    
Subjt:  --------------------------------------VAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT---

Query:  --------------------------------------VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR
                                              VD AGFV++GPN FPLFVSE+GYDQR +NDAEN FMSCFT HL QKDLDWALW+WQG+YYYR
Subjt:  --------------------------------------VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR

Query:  EGEAETTEVFGVLDSN
        EG+AE TEVFGVL+SN
Subjt:  EGEAETTEVFGVLDSN

XP_022157219.1 uncharacterized protein LOC111023982 [Momordica charantia]1.8e-5764.25Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT----------------------------------------
        VVAMSLRN IRGTMEN NDWNNYVTQGVTTIH I+PA+LVIVSGLNYDNDLRCLKEKPLT                                        
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT----------------------------------------

Query:  -VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
         +D AGFV+EGPN FPLFVSE+GYDQR  NDAEN FMSCF  HL QKDLDWALW+WQG+YYYREG+ E  E FGVLDSN
Subjt:  -VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

XP_022157219.1 uncharacterized protein LOC111023982 [Momordica charantia]1.5e-0392.31Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV
        MLAEGLNHRP KELADEAIKL+FNCV
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV

XP_022157219.1 uncharacterized protein LOC111023982 [Momordica charantia]4.0e-5743.67Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNC---------------------------------------------------------------------------
        MLAEGLNHRPLKELADEAIKL+FNC                                                                           
Subjt:  MLAEGLNHRPLKELADEAIKLKFNC---------------------------------------------------------------------------

Query:  -------------------------------------VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT---
                                             VVAMSLRN IRGTMEN NDWNNYVTQGVTTIH I+P +LVIVSGLNYDNDLRCLKEKPL    
Subjt:  -------------------------------------VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT---

Query:  --------------------------------------VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR
                                              VD AGFV+EG N FPLFVSE+GYDQR  N+AEN FMSCFT HL QKDLDWALW+WQG+YYYR
Subjt:  --------------------------------------VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR

Query:  EGEAETTEVFGVLDSN
        EG+AE  E FGVLDSN
Subjt:  EGEAETTEVFGVLDSN

TrEMBL top hitse value%identityAlignment
A0A0A0K853 Mannan endo-1,4-beta-mannosidase7.2e-0492.31Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV
        ML EGLNHRPLKELADEAIKL+FNCV
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV

A0A0A0K853 Mannan endo-1,4-beta-mannosidase6.2e-5642.09Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV--------------------------------------------------------------------------
        ML EGLNHRPLKELADEAIKLKFNCV                                                                          
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV--------------------------------------------------------------------------

Query:  --------------------------------------VAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT---
                                              +AMSLRN IRGT EN NDWNNY+TQGVT +H  +P +LVIVSGLN+DNDLRCLKEKPL    
Subjt:  --------------------------------------VAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT---

Query:  --------------------------------------VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR
                                              VD AGFV++GPN FPLFVSE+GYDQR +NDAEN FMSCFT HL QKDLDWALW+WQG+YYYR
Subjt:  --------------------------------------VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR

Query:  EGEAETTEVFGVLDSN
        EG+AE TEVFGVL+SN
Subjt:  EGEAETTEVFGVLDSN

A0A6J1DVV8 Mannan endo-1,4-beta-mannosidase8.7e-5864.25Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT----------------------------------------
        VVAMSLRN IRGTMEN NDWNNYVTQGVTTIH I+PA+LVIVSGLNYDNDLRCLKEKPLT                                        
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT----------------------------------------

Query:  -VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
         +D AGFV+EGPN FPLFVSE+GYDQR  NDAEN FMSCF  HL QKDLDWALW+WQG+YYYREG+ E  E FGVLDSN
Subjt:  -VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

A0A6J1DVV8 Mannan endo-1,4-beta-mannosidase7.2e-0492.31Show/hide
Query:  MLAEGLNHRPLKELADEAIKLKFNCV
        MLAEGLNHRP KELADEAIKL+FNCV
Subjt:  MLAEGLNHRPLKELADEAIKLKFNCV

A0A6J1DVV8 Mannan endo-1,4-beta-mannosidase4.8e-5662.57Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------------------
        VV MSLRN +RG MEN NDWNNYVTQGVTTIHKI+PA+LVIVSGLNYDNDLRCLK+KPL V                                       
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------------------

Query:  --DDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
          D A FV+EGPN FPLFVSE+GYDQR  +DAEN FMSCFT HL QKDLDWALW+WQG+YYYREG+AE  E FGVLDSN
Subjt:  --DDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

A0A6J1H2U6 Mannan endo-1,4-beta-mannosidase1.5e-5461.75Show/hide
Query:  KFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT------------------------------------
        K + VV MSLRN IRGT EN NDWNNYVTQGVTTIH I+P +LVIVSGLNYDNDLRCLKEKPL                                     
Subjt:  KFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT------------------------------------

Query:  -----VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
             VD A FV EG N FPLFVSE+GYDQR  NDAEN FMSCFT HL QKDLDWALW+WQG+YYYREG+AE  E FGVLDSN
Subjt:  -----VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

A0A6J1JZU8 Mannan endo-1,4-beta-mannosidase1.5e-5461.75Show/hide
Query:  KFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT------------------------------------
        K + VV MSLRN IRGT EN NDWNNYVTQGVTTIH I+P +LVIVSGLNYDNDLRCLKEKPL                                     
Subjt:  KFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLT------------------------------------

Query:  -----VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
             VD A FV EG N FPLFVSE+GYDQR  NDAEN FMSCFT HL QKDLDWALW+WQG+YYYREG+AE  E FGVLDSN
Subjt:  -----VDDAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

SwissProt top hitse value%identityAlignment
C0HLA0 Glycosyl hydrolase 5 family protein5.1e-2336.25Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV------------------------------------DDA
        VVAMSLRN +RG       W+ ++  G  T+HK +P +LVI+SGL +D DL  L   P+T+                                     + 
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV------------------------------------DDA

Query:  GFVLEGPN--SFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR
        GFV    N  + PLF+SE G DQR  ND +N +++C   +L ++DLDWALW+  G+YYYR
Subjt:  GFVLEGPN--SFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYR

Arabidopsis top hitse value%identityAlignment
AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein3.5e-2734.48Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV----------------DDAGFVLEGPN------------
        VV MSLRN +RG  +N NDW  Y+ QG   +H  +  +LVI+SGL++D DL  ++ +P+ +                D   +    PN            
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV----------------DDAGFVLEGPN------------

Query:  --------SFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
                 FPLF+SE G D+RG N  +N +  C T    + D+DW+LW+  G+YY R+G+    E +GVLDS+
Subjt:  --------SFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

AT3G26130.1 Cellulase (glycosyl hydrolase family 5) protein1.2e-3038.62Show/hide
Query:  LKELADEAIKLKFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVD-----------------------
        LK++A     +  N VV MSLRN +RG  +N  DW  Y+ +G   +H ++P +LVIVSGLNY  DL  L+E+P  V                        
Subjt:  LKELADEAIKLKFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVD-----------------------

Query:  -------------DAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
                      +GF+LE     PLFVSE G DQRG N  +N F+SCF      +DLDW+LW+  G+YY RE    + E +GVLD N
Subjt:  -------------DAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

AT3G26140.1 Cellulase (glycosyl hydrolase family 5) protein1.9e-2532.95Show/hide
Query:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------DDAGFVLEGPNS
        VV MSLRN +RG  +N +DW  Y+ QG   +H+ +P +LVI+SGL+YD DL  ++ + + +                           +  G +L+   +
Subjt:  VVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTV---------------------------DDAGFVLEGPNS

Query:  --------FPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
                FP+F+SE G D RG N  +N ++ C      + D+DW++W+ QG+YY REG    +E +G+LDS+
Subjt:  --------FPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN

AT5G16700.1 Glycosyl hydrolase superfamily protein6.0e-1930.72Show/hide
Query:  FNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVD-----------------------------------
        F  V+ MSLRN  RG  +  + W  ++ QG   +H  +P LLVI+SG+++D +L  L+++ + V                                    
Subjt:  FNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVD-----------------------------------

Query:  ----DAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREG
            + GF+L     FPL +SE G DQRG + + N +M+C      + DLDWA+W+  G+YY R G
Subjt:  ----DAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREG

AT5G17500.1 Glycosyl hydrolase superfamily protein9.3e-2835.42Show/hide
Query:  LKELADEAIKLKFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVD-----------------------
        LK++A   I +    VV MSLRN +RG    + DW  Y+ +G   +H  +P +LVI+SGLN+D DL  LK++P+ +                        
Subjt:  LKELADEAIKLKFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVD-----------------------

Query:  ----------------DAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN
                          GFVL+    FPLF+SE G DQRG +   N +M+C      +KDLDWA+W+  G YY+REG+    E +G+LD+N
Subjt:  ----------------DAGFVLEGPNSFPLFVSEHGYDQRGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCAGAAGGCCTAAACCATAGGCCACTAAAAGAACTTGCCGATGAGGCAATCAAGTTGAAGTTCAATTGTGTGGTAGCAATGAGCCTACGAAATGGGATACGTGG
AACAATGGAAAATACAAATGATTGGAACAACTATGTAACTCAAGGAGTAACGACAATCCACAAAATAAGTCCAGCACTTTTAGTGATTGTTTCAGGGTTAAATTATGACA
ATGATCTTCGATGCTTAAAGGAGAAGCCCTTGACAGTTGATGATGCTGGATTTGTATTGGAAGGACCAAACTCATTTCCTTTGTTTGTTAGTGAACATGGGTACGACCAG
AGGGGGACAAACGATGCTGAAAATTGGTTCATGAGTTGCTTCACAATTCATCTTGTTCAAAAGGACTTGGATTGGGCACTATGGAGTTGGCAGGGCAATTATTATTATAG
AGAAGGTGAAGCCGAGACTACCGAAGTGTTTGGAGTTCTCGACTCCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCAGAAGGCCTAAACCATAGGCCACTAAAAGAACTTGCCGATGAGGCAATCAAGTTGAAGTTCAATTGTGTGGTAGCAATGAGCCTACGAAATGGGATACGTGG
AACAATGGAAAATACAAATGATTGGAACAACTATGTAACTCAAGGAGTAACGACAATCCACAAAATAAGTCCAGCACTTTTAGTGATTGTTTCAGGGTTAAATTATGACA
ATGATCTTCGATGCTTAAAGGAGAAGCCCTTGACAGTTGATGATGCTGGATTTGTATTGGAAGGACCAAACTCATTTCCTTTGTTTGTTAGTGAACATGGGTACGACCAG
AGGGGGACAAACGATGCTGAAAATTGGTTCATGAGTTGCTTCACAATTCATCTTGTTCAAAAGGACTTGGATTGGGCACTATGGAGTTGGCAGGGCAATTATTATTATAG
AGAAGGTGAAGCCGAGACTACCGAAGTGTTTGGAGTTCTCGACTCCAACTAG
Protein sequenceShow/hide protein sequence
MLAEGLNHRPLKELADEAIKLKFNCVVAMSLRNGIRGTMENTNDWNNYVTQGVTTIHKISPALLVIVSGLNYDNDLRCLKEKPLTVDDAGFVLEGPNSFPLFVSEHGYDQ
RGTNDAENWFMSCFTIHLVQKDLDWALWSWQGNYYYREGEAETTEVFGVLDSN