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Spg035247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSURP and G-patch domain-containing protein 1-like protein
Genome locationscaffold7:23390797..23393126
RNA-Seq ExpressionSpg035247
SyntenySpg035247
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0008380 - RNA splicing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058647.1 SURP and G-patch domain-containing protein 1-like protein [Cucumis melo var. makuwa]3.7e-0884.09Show/hide
Query:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW
        + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSS+TTAW
Subjt:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW

KGN45149.1 hypothetical protein Csa_016640 [Cucumis sativus]9.6e-0973.68Show/hide
Query:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST
        + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSSNTTAW      T P PS+
Subjt:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST

NP_001292719.1 SURP and G-patch domain-containing protein 1-like protein [Cucumis sativus]4.3e-0960.53Show/hide
Query:  SSDSVQPPFAR--------RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST
        SS++V+P  +         + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSSNTTAW      T P PS+
Subjt:  SSDSVQPPFAR--------RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST

XP_008461265.1 PREDICTED: SURP and G-patch domain-containing protein 1-like protein [Cucumis melo]3.7e-0884.09Show/hide
Query:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW
        + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSS+TTAW
Subjt:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW

XP_022960145.1 SURP and G-patch domain-containing protein 1-like protein [Cucurbita moschata]8.2e-0868.97Show/hide
Query:  SQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAWF----NTPPSPSTLPLVVV
        SQKSFQQ SSSNY+TPASAL+EPSEDSRASVGSSNTTAW      +  SPS  P+ ++
Subjt:  SQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAWF----NTPPSPSTLPLVVV

TrEMBL top hitse value%identityAlignment
A0A0A0K8D7 Uncharacterized protein4.7e-0973.68Show/hide
Query:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST
        + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSSNTTAW      T P PS+
Subjt:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST

A0A1S3CDV7 SURP and G-patch domain-containing protein 1-like protein1.8e-0884.09Show/hide
Query:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW
        + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSS+TTAW
Subjt:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW

A0A5D3CGY0 SURP and G-patch domain-containing protein 1-like protein1.8e-0884.09Show/hide
Query:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW
        + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSS+TTAW
Subjt:  RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW

A0A6J1KZU7 SURP and G-patch domain-containing protein 1-like protein4.0e-0868.97Show/hide
Query:  SQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAWF----NTPPSPSTLPLVVV
        SQKSFQQ SSSNY+TPASAL+EPSEDSRASVGSSNTTAW      +  SPS  P+ ++
Subjt:  SQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAWF----NTPPSPSTLPLVVV

B3TLK2 Gamma reponse I-like protein2.1e-0960.53Show/hide
Query:  SSDSVQPPFAR--------RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST
        SS++V+P  +         + RT SQKS QQSSSSNYQTPASAL+EPSEDSR SVGSSNTTAW      T P PS+
Subjt:  SSDSVQPPFAR--------RSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAW----FNTPPSPST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52360.1 Coatomer, beta' subunit9.0e-0579.17Show/hide
Query:  ILASLYSGTICIWNDQSQIMVKSF
        ILASLYSGT+CIWN Q+Q+M KSF
Subjt:  ILASLYSGTICIWNDQSQIMVKSF

AT1G52360.2 Coatomer, beta' subunit9.0e-0579.17Show/hide
Query:  ILASLYSGTICIWNDQSQIMVKSF
        ILASLYSGT+CIWN Q+Q+M KSF
Subjt:  ILASLYSGTICIWNDQSQIMVKSF

AT1G79990.1 structural molecules9.0e-0583.33Show/hide
Query:  ILASLYSGTICIWNDQSQIMVKSF
        ILASLYSGT+CIWN Q+Q MVKSF
Subjt:  ILASLYSGTICIWNDQSQIMVKSF

AT1G79990.3 structural molecules9.0e-0583.33Show/hide
Query:  ILASLYSGTICIWNDQSQIMVKSF
        ILASLYSGT+CIWN Q+Q MVKSF
Subjt:  ILASLYSGTICIWNDQSQIMVKSF

AT1G79990.5 structural molecules9.0e-0583.33Show/hide
Query:  ILASLYSGTICIWNDQSQIMVKSF
        ILASLYSGT+CIWN Q+Q MVKSF
Subjt:  ILASLYSGTICIWNDQSQIMVKSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTAATCTTCGTAGGGCCGTGTTCTTTGTCTTCGGACTCCGTTCAGCCGCCGTTCGCACGTCGGTCAAGGACTTGTTCCCAGAAATCTTTCCAGCAGTCTTCCTC
GTCAAATTATCAAACCCCTGCTTCTGCTTTATTTGAACCGTCTGAGGATTCAAGAGCTTCTGTGGGTTCATCTAATACTACTGCATGGTTTAATACTCCTCCCTCGCCGT
CTACTCTGCCTCTCGTCGTCGTCTTTCTCGTTCGTGTTTTTTCATCGGCCACGAGACCCCAATTTTTTTCCCTTGCTGAAGGTATTGTTATTGTCGTTTTTGTTACTGTC
TTCGTTCGTGTTGTTTTCGTCATCAATGGATTCGGAAGTAACGATTTCGATTTCGATTTGGATTCTGATTTCGAATCGCATAATGAATCTCTGAGAGATGATTTTGATGT
TAAAGAAGGGGAGAAACTTGGAGCATATGTTGAAGCTATGAGAAAACTAATGAAGTTAAATGGATATAATGTGATTCTTGCGAGTTTGTATTCAGGAACTATATGCATTT
GGAACGATCAGTCTCAGATCATGGTCAAGTCTTTTGGGTCTGCTGCATTATTTTATTTTCTCGGTTTTGTTGTGATTTCAATGGAAGTCATTCGCAACGACGTGGTTGCT
CATCAAAATGGGAGGAATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTAATCTTCGTAGGGCCGTGTTCTTTGTCTTCGGACTCCGTTCAGCCGCCGTTCGCACGTCGGTCAAGGACTTGTTCCCAGAAATCTTTCCAGCAGTCTTCCTC
GTCAAATTATCAAACCCCTGCTTCTGCTTTATTTGAACCGTCTGAGGATTCAAGAGCTTCTGTGGGTTCATCTAATACTACTGCATGGTTTAATACTCCTCCCTCGCCGT
CTACTCTGCCTCTCGTCGTCGTCTTTCTCGTTCGTGTTTTTTCATCGGCCACGAGACCCCAATTTTTTTCCCTTGCTGAAGGTATTGTTATTGTCGTTTTTGTTACTGTC
TTCGTTCGTGTTGTTTTCGTCATCAATGGATTCGGAAGTAACGATTTCGATTTCGATTTGGATTCTGATTTCGAATCGCATAATGAATCTCTGAGAGATGATTTTGATGT
TAAAGAAGGGGAGAAACTTGGAGCATATGTTGAAGCTATGAGAAAACTAATGAAGTTAAATGGATATAATGTGATTCTTGCGAGTTTGTATTCAGGAACTATATGCATTT
GGAACGATCAGTCTCAGATCATGGTCAAGTCTTTTGGGTCTGCTGCATTATTTTATTTTCTCGGTTTTGTTGTGATTTCAATGGAAGTCATTCGCAACGACGTGGTTGCT
CATCAAAATGGGAGGAATGAATGA
Protein sequenceShow/hide protein sequence
MFLIFVGPCSLSSDSVQPPFARRSRTCSQKSFQQSSSSNYQTPASALFEPSEDSRASVGSSNTTAWFNTPPSPSTLPLVVVFLVRVFSSATRPQFFSLAEGIVIVVFVTV
FVRVVFVINGFGSNDFDFDLDSDFESHNESLRDDFDVKEGEKLGAYVEAMRKLMKLNGYNVILASLYSGTICIWNDQSQIMVKSFGSAALFYFLGFVVISMEVIRNDVVA
HQNGRNE