; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035281 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035281
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionThiamine-phosphate pyrophosphorylase
Genome locationscaffold7:22278497..22292022
RNA-Seq ExpressionSpg035281
SyntenySpg035281
Gene Ontology termsGO:0009228 - thiamine biosynthetic process (biological process)
GO:0009229 - thiamine diphosphate biosynthetic process (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004789 - thiamine-phosphate diphosphorylase activity (molecular function)
GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR004399 - Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain
IPR013749 - Pyridoxamine kinase/Phosphomethylpyrimidine kinase
IPR029056 - Ribokinase-like
IPR045029 - Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035954.1 thiamine biosynthetic bifunctional enzyme TH1 [Cucumis melo var. makuwa]1.2e-6590.2Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+QEE VVA+S R E +IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVS+QLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIV+VLHQ LK+FPVRALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

TYK30446.1 thiamine biosynthetic bifunctional enzyme TH1 [Cucumis melo var. makuwa]1.2e-6590.2Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+QEE VVA+S R E +IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVS+QLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIV+VLHQ LK+FPVRALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

XP_008460243.1 PREDICTED: thiamine biosynthetic bifunctional enzyme TH1, chloroplastic isoform X2 [Cucumis melo]1.2e-6590.2Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+QEE VVA+S R E +IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVS+QLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIV+VLHQ LK+FPVRALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

XP_022957337.1 thiamine biosynthetic bifunctional enzyme TH1, chloroplastic isoform X1 [Cucurbita moschata]9.0e-6689.54Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+ EETVVA+S R EM+IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNI+PEGFVSEQLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GI++V+HQRLK+FPV+ALVVDPVMVSTSGDVLA PTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

XP_038876926.1 thiamine biosynthetic bifunctional enzyme TH1, chloroplastic [Benincasa hispida]2.8e-6792.16Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFCVAMK+ EETVVA+S R EM+IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIVRVLHQ LK+FPV+ALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

TrEMBL top hitse value%identityAlignment
A0A1S3CCI6 Thiamine-phosphate pyrophosphorylase5.7e-6690.2Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+QEE VVA+S R E +IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVS+QLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIV+VLHQ LK+FPVRALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

A0A5A7SX87 Thiamine biosynthetic bifunctional enzyme TH15.7e-6690.2Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+QEE VVA+S R E +IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVS+QLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIV+VLHQ LK+FPVRALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

A0A5D3E3I3 Thiamine biosynthetic bifunctional enzyme TH15.7e-6690.2Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+QEE VVA+S R E +IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITA+TAQNTVGVQDVNIVPEGFVS+QLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GIV+VLHQ LK+FPVRALVVDPVMVSTSGDVLAGPTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

A0A6J1DTL9 Thiamine-phosphate pyrophosphorylase9.7e-6681.46Show/hide
Query:  MGSFQ-LFSSSFSLK-----------FNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVG
        MGS Q LF SSFSLK            NQ SR CVAMKRQEETV A +G+ EM+IPHVLS+AGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVG
Subjt:  MGSFQ-LFSSSFSLK-----------FNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVG

Query:  VQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        VQ VNIVPEGFVSEQL SVLSDMQVDVVKTGMLPS GIV+VLHQ LK+FPVRALV+DPVMVSTSGDVLAGP I+SVLQ
Subjt:  VQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

A0A6J1GYV1 Thiamine-phosphate pyrophosphorylase4.4e-6689.54Show/hide
Query:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV
        KFNQ SRFC+AMK+ EETVVA+S R EM+IPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNI+PEGFVSEQLKSVLSDMQV
Subjt:  KFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQV

Query:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ
        DVVKTGMLPS GI++V+HQRLK+FPV+ALVVDPVMVSTSGDVLA PTIISVLQ
Subjt:  DVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQ

SwissProt top hitse value%identityAlignment
O48881 Thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic2.0e-3962.16Show/hide
Query:  TVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVL
        ++  T+     K+  VL+VAGSDSGAGAGIQAD+K CAARGVYC++V TAV A+NT  VQ V+++P   VSEQLKSVLSD +VDVVKTGMLPS  IV VL
Subjt:  TVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVL

Query:  HQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFS
         Q L ++PVRALVVDPVMVSTSG VLAG +I+S+ +  +L+ +A I +
Subjt:  HQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFS

P61422 Thiamine biosynthesis bifunctional protein ThiED4.4e-2353.72Show/hide
Query:  VLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVLHQRLKKFPVRALVVD
        VL+VAGSDSG GAGIQADLKT    G Y S+V+TA+TAQNT GV  ++ VP  FV++QL +V SD+ VDVVKTGML S   +  +  +L ++  R +VVD
Subjt:  VLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVLHQRLKKFPVRALVVD

Query:  PVMVSTSGDVLAGPTIISVLQ
        PVMV+  G  L     +SVL+
Subjt:  PVMVSTSGDVLAGPTIISVLQ

P76422 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase4.9e-2244.85Show/hide
Query:  MKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVLHQRLKKFPVR
        MK  + L++AG+D   GAGIQADLKT +A G Y  +VITA+ AQNT GVQ V  +   FV+ QL SV SD+++D  K GML    IV  + +RL+++ ++
Subjt:  MKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVLHQRLKKFPVR

Query:  ALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQI
         +V+D VM++ SGD L  P+ ++ L+   L  V+ I
Subjt:  ALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQI

Q2QWK9 Probable thiamine biosynthetic bifunctional enzyme, chloroplastic9.1e-4564.24Show/hide
Query:  KRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVG
        +R      + S   EM  PHVL+VAGSDSG GAGIQAD+K CAA G YCS+V+TAVTAQNT GVQ +++VPE F+ EQL SVLSDM VDVVKTGMLPS+G
Subjt:  KRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVG

Query:  IVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQI
        +VRVL + LKKFPV+ALVVDPVMVSTSGD L+  + +SV +  +L  +A I
Subjt:  IVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQI

Q5M731 Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic5.9e-4466.89Show/hide
Query:  TVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVL
        T   T+     K+P VL+VAGSDSGAGAGIQADLK CAARGVYC++VITAVTAQNT GVQ V+++P  F+SEQLKSVLSD + DVVKTGMLPS  IV VL
Subjt:  TVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVL

Query:  HQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFS
         Q L  FPVRALVVDPVMVSTSG VLAG +I+S+ +  +L+ +A I +
Subjt:  HQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFS

Arabidopsis top hitse value%identityAlignment
AT1G22940.1 thiamin biosynthesis protein, putative4.2e-4566.89Show/hide
Query:  TVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVL
        T   T+     K+P VL+VAGSDSGAGAGIQADLK CAARGVYC++VITAVTAQNT GVQ V+++P  F+SEQLKSVLSD + DVVKTGMLPS  IV VL
Subjt:  TVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSVGIVRVL

Query:  HQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFS
         Q L  FPVRALVVDPVMVSTSG VLAG +I+S+ +  +L+ +A I +
Subjt:  HQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGCTTTCAGCTCTTTAGTTCTTCCTTCTCCCTCAAGTTCAATCAAGGTTCTAGGTTTTGTGTGGCCATGAAGAGACAGGAAGAAACAGTTGTAGCTACAAGTGG
TCGCTGTGAGATGAAGATTCCTCATGTGTTGAGTGTTGCTGGTTCTGATTCAGGAGCAGGGGCTGGAATCCAAGCGGATCTTAAGACTTGTGCTGCTCGTGGAGTGTACT
GCTCCACTGTGATAACTGCTGTTACTGCACAGAACACTGTTGGGGTTCAGGATGTAAACATTGTGCCGGAGGGTTTTGTTTCAGAGCAGCTGAAATCTGTTCTCTCTGAT
ATGCAAGTGGACGTGGTGAAAACTGGAATGCTACCTTCTGTTGGCATTGTTCGGGTTCTACATCAGCGCCTGAAGAAGTTTCCAGTTCGAGCTTTGGTGGTTGATCCTGT
CATGGTGTCTACCAGTGGAGATGTTCTGGCTGGTCCTACCATTATTTCAGTGTTACAGCCTCTGAAGCTTATGTGTGTGGCTCAAATTTTTAGCCTTGAGACTTACATCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGCTTTCAGCTCTTTAGTTCTTCCTTCTCCCTCAAGTTCAATCAAGGTTCTAGGTTTTGTGTGGCCATGAAGAGACAGGAAGAAACAGTTGTAGCTACAAGTGG
TCGCTGTGAGATGAAGATTCCTCATGTGTTGAGTGTTGCTGGTTCTGATTCAGGAGCAGGGGCTGGAATCCAAGCGGATCTTAAGACTTGTGCTGCTCGTGGAGTGTACT
GCTCCACTGTGATAACTGCTGTTACTGCACAGAACACTGTTGGGGTTCAGGATGTAAACATTGTGCCGGAGGGTTTTGTTTCAGAGCAGCTGAAATCTGTTCTCTCTGAT
ATGCAAGTGGACGTGGTGAAAACTGGAATGCTACCTTCTGTTGGCATTGTTCGGGTTCTACATCAGCGCCTGAAGAAGTTTCCAGTTCGAGCTTTGGTGGTTGATCCTGT
CATGGTGTCTACCAGTGGAGATGTTCTGGCTGGTCCTACCATTATTTCAGTGTTACAGCCTCTGAAGCTTATGTGTGTGGCTCAAATTTTTAGCCTTGAGACTTACATCT
GA
Protein sequenceShow/hide protein sequence
MGSFQLFSSSFSLKFNQGSRFCVAMKRQEETVVATSGRCEMKIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAVTAQNTVGVQDVNIVPEGFVSEQLKSVLSD
MQVDVVKTGMLPSVGIVRVLHQRLKKFPVRALVVDPVMVSTSGDVLAGPTIISVLQPLKLMCVAQIFSLETYI