; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg035319 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg035319
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:24877907..24881854
RNA-Seq ExpressionSpg035319
SyntenySpg035319
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037515.1 uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa]4.2e-1152.08Show/hide
Query:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQ
        P GNR SLQT +L KT                 VEIELPV DTLP SAESS S+S S         + EDDV WLH +FR K AGGPGGGVT  +Q
Subjt:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQ

KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.6e-1048.51Show/hide
Query:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS----------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGG
        P GNR SLQT +L KT                 VEIELP+PDTLPTSAESS S+SS+          V+  G    +  DDV WLH +FR K  GGPGGG
Subjt:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS----------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGG

Query:  V
        V
Subjt:  V

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]7.2e-1148Show/hide
Query:  PMGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGV
        P GNR +L T KL KTVEIELPVPDTLPTSAESS+S+SS+                          V  EG    +  DD+ WLH +F  K AG PGGGV
Subjt:  PMGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGV

KAA0060199.1 uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa]3.8e-1252.94Show/hide
Query:  RPMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQTQN
        RP GNR SLQT KL KT                 VEIELPVPDTLPTSAES  S+S S         +  DDV WLH +FR K AGGPGGGVT  F    
Subjt:  RPMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQTQN

Query:  GS
        GS
Subjt:  GS

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]5.5e-1143.9Show/hide
Query:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRW
        P GNRSSLQT +L KT                 VEIELPVPDTLPTSAES  S+SS+                          V  EG    +  DDV W
Subjt:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRW

Query:  LHDIFRTKLAGGPGGGVTALFQT
        LH +FR K+AGGPGGGVT   Q+
Subjt:  LHDIFRTKLAGGPGGGVTALFQT

TrEMBL top hitse value%identityAlignment
A0A5A7TKT0 Reverse transcriptase7.7e-1148.51Show/hide
Query:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS----------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGG
        P GNR SLQT +L KT                 VEIELP+PDTLPTSAESS S+SS+          V+  G    +  DDV WLH +FR K  GGPGGG
Subjt:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS----------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGG

Query:  V
        V
Subjt:  V

A0A5A7UAH6 CCHC-type domain-containing protein3.5e-1148Show/hide
Query:  PMGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGV
        P GNR +L T KL KTVEIELPVPDTLPTSAESS+S+SS+                          V  EG    +  DD+ WLH +F  K AG PGGGV
Subjt:  PMGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGV

A0A5A7VIY9 Uncharacterized protein2.7e-1143.9Show/hide
Query:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRW
        P GNRSSLQT +L KT                 VEIELPVPDTLPTSAES  S+SS+                          V  EG    +  DDV W
Subjt:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSS--------------------------VKQEGQRVSLEEDDVRW

Query:  LHDIFRTKLAGGPGGGVTALFQT
        LH +FR K+AGGPGGGVT   Q+
Subjt:  LHDIFRTKLAGGPGGGVTALFQT

A0A5D3BAD1 Retrotrans_gag domain-containing protein1.8e-1252.94Show/hide
Query:  RPMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQTQN
        RP GNR SLQT KL KT                 VEIELPVPDTLPTSAES  S+S S         +  DDV WLH +FR K AGGPGGGVT  F    
Subjt:  RPMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQTQN

Query:  GS
        GS
Subjt:  GS

A0A5D3BSA6 Retrotrans_gag domain-containing protein2.0e-1152.08Show/hide
Query:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQ
        P GNR SLQT +L KT                 VEIELPV DTLP SAESS S+S S         + EDDV WLH +FR K AGGPGGGVT  +Q
Subjt:  PMGNRSSLQTRKLAKT-----------------VEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFRTKLAGGPGGGVTALFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGGAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGACTCTTGTCTGGGCAAAT
CGGTTGGGAATCTCGTTTTCCTTTCTTCAGGCCAATGGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACAGTAGAGATCGAGCTCCCAGTGCCTGATACAC
TGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAGTGAAGCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGACATCTTCCGG
ACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGCCTTGTTTCAGACTCAAAATGGTTCTGTTTTGAGGAATCTTGCGCCATTTGGCCTTAAGCTCAAGCACCTCCT
ATCTAAGGGCATTGAGTTGGTGTTGTTGGACCTTGGCGAACCCCAACCAGCAGGCATTTGGACCTTTTGGGAGCTTATCTTGGTTGCTTTAGGCTTGTTGAGGTTGTGTA
GAAGTGTTGTAGATGTTGCAAGTTTGGAAGATGATTCAGACCTTGGTGGCGAGGAGAATTACAAGGAAGATTCCTATGGTGTTATGGTGTTATTATGTTTGCTTTGTTTA
TTGCATGATGCTACGAGACCTGACTCGTATAGAGAAGCTAGGTGGTGGAGTTTGGAAGAGTCCAAGACCTTGAAAGAAGAAGATTTGGGCCAAAGATTGAAGGAGAAGCC
CAAAAATCAGCCAAGCCACAATTTTGGAATAAATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGGAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGCAGAGAACCTCGAATCTGTGTTGTCTGTGTTCGACTCTTGTCTGGGCAAAT
CGGTTGGGAATCTCGTTTTCCTTTCTTCAGGCCAATGGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACAGTAGAGATCGAGCTCCCAGTGCCTGATACAC
TGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTCAGTGAAGCAGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGACATCTTCCGG
ACTAAGCTAGCAGGTGGTCCGGGAGGGGGTGTGACAGCCTTGTTTCAGACTCAAAATGGTTCTGTTTTGAGGAATCTTGCGCCATTTGGCCTTAAGCTCAAGCACCTCCT
ATCTAAGGGCATTGAGTTGGTGTTGTTGGACCTTGGCGAACCCCAACCAGCAGGCATTTGGACCTTTTGGGAGCTTATCTTGGTTGCTTTAGGCTTGTTGAGGTTGTGTA
GAAGTGTTGTAGATGTTGCAAGTTTGGAAGATGATTCAGACCTTGGTGGCGAGGAGAATTACAAGGAAGATTCCTATGGTGTTATGGTGTTATTATGTTTGCTTTGTTTA
TTGCATGATGCTACGAGACCTGACTCGTATAGAGAAGCTAGGTGGTGGAGTTTGGAAGAGTCCAAGACCTTGAAAGAAGAAGATTTGGGCCAAAGATTGAAGGAGAAGCC
CAAAAATCAGCCAAGCCACAATTTTGGAATAAATAATTAA
Protein sequenceShow/hide protein sequence
MVFGMGNRAQDFRAKQEDLCREPRICVVCVRLLSGQIGWESRFPFFRPMGNRSSLQTRKLAKTVEIELPVPDTLPTSAESSRSSSSSVKQEGQRVSLEEDDVRWLHDIFR
TKLAGGPGGGVTALFQTQNGSVLRNLAPFGLKLKHLLSKGIELVLLDLGEPQPAGIWTFWELILVALGLLRLCRSVVDVASLEDDSDLGGEENYKEDSYGVMVLLCLLCL
LHDATRPDSYREARWWSLEESKTLKEEDLGQRLKEKPKNQPSHNFGINN